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Corpus Callosum

The corpus callosum is the largest white matter structure in the brain, connecting the two cerebral hemispheres and facilitating interhemispheric communication.
It plays a crucial role in sensory, motor, and cognitive functions.
Researchers can leverage PubCompare.ai to optimize their corpus callosum studies, locating cutting-edge protocols from literature, preprints, and patents, and using AI-driven comparisons to identify the best protocols and products.
This can enhance the reproducibility and accuracy of corpus callosum research, advancing our understanding of this critical brain structure.

Most cited protocols related to «Corpus Callosum»

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Publication 2006
Anisotropy Corpus Callosum Diffusion Fibrosis Mental Orientation Population Group

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Publication 2019
Boundary Elements Brain Corpus Callosum Cortex, Cerebral Cranium Electricity Head Joints Movement Scalp

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Publication 2010
Brain Corpus Callosum Cortex, Cerebral Gyrus Cinguli Heart Ventricle Insula of Reil Opercular Cortex Seahorses Thalamus
Voxel-wise features were extracted in a common template space (ΩTemplate, see Figure 2) based on the data of the training set. This common template space was constructed using a procedure that avoids bias toward any of the individual training images (Seghers et al., 2004 ). In this approach, the coordinate transformations from the template space to the subject's image space (Vi: ΩTemplate → ΩIi) were derived from pairwise image registrations. For computation of Vi, the image of an individual training subject (Ii) was registered to all other training images (Ij) using Ii as the fixed image. This resulted in a set of transformations Wi,j : ΩIi→ΩIj. By averaging the transformations Wi, j, the transformation Ui : ΩIi→ΩTemplate was calculated:
Ui(x)=1Nj=1NWi,j(x).
The transformation Vi was calculated as an inversion of Ui: Vi = Ui−1. Note that the identity transformation Wi,i is also included in (5). The pairwise registrations were performed using a similarity (rigid plus isotropic scaling), affine, and nonrigid B-spline transformation model consecutively. The nonrigid B-spline registration used a three-level multi-resolution framework with isotropic control-point spacings of 24, 12, and 6 mm in the three resolutions respectively.
A template image was built using: I¯(x)=1Ni=1NIi(Vi(x)), with Ii(Vi) representing the deformed individual training images. The test images were not included in the construction of ΩTemplate. For the test images, the transformation to template space (Vi) was obtained using the same procedure described above: using pairwise registration of each image with all training images, followed by averaging and inversion. Brain masks and tissue maps were transformed to template space using Vi.
For extraction of the region-wise features, a set of 72 brain ROIs was defined for each subject individually in subject space (ΩI) using a multi-atlas segmentation procedure (Figure 3). Thirty labeled T1w images containing 83 ROIs each (Hammers et al., 2003 (link); Gousias et al., 2008 (link)) were used as atlas images. The atlas images were registered to the subject's T1w image using a rigid, affine, and nonrigid B-spline transformation model consecutively resulting in transformation Si,k : ΩIi → ΩAtlask. Registration was performed by maximization of mutual information within dilated brain masks (Smith, 2002 (link)). For initialization, the dilated brain masks were rigidly registered. For nonrigid registration, the same multi-resolution settings were used as in the template space construction. For this step, the subjects' images were corrected for inhomogeneities (Tustison et al., 2010 (link)). Labels were propagated to ΩIi using Si,k and fused using a majority voting algorithm (Heckemann et al., 2006 (link)). The brain stem, corpus callosum, third ventricle, lateral ventricles, cerebellum, and substantia nigra were excluded.
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Publication 2013
Brain Brain Stem Cerebellum Corpus Callosum Inversion, Chromosome Microtubule-Associated Proteins Muscle Rigidity Substantia Nigra Tissues Ventricle, Lateral Ventricles, Third

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Publication 2018
AN 12 Attention Axon Brain Clinical Protocols Corpus Callosum Diffusion Histocompatibility Testing Human Body Knee Microtubule-Associated Proteins Muscle Rigidity Splenius Tissues White Matter

Most recents protocols related to «Corpus Callosum»

Authorizations for reporting these three cases were granted by the Eastern Ontario Regional Forensic Unit and the Laboratoire de Sciences Judiciaires et de Médecine Légale du Québec.
The sampling followed a relatively standardized protocol for all TBI cases: samples were collected from the cortex and underlying white matter of the pre-frontal gyrus, superior and middle frontal gyri, temporal pole, parietal and occipital lobes, deep frontal white matter, hippocampus, anterior and posterior corpus callosum with the cingula, lenticular nucleus, thalamus with the posterior limb of the internal capsule, midbrain, pons, medulla, cerebellar cortex and dentate nucleus. In some cases, gross pathology (e.g. contusions) mandated further sampling along with the dura and spinal cord if available. The number of available sections for these three cases was 26 for case1, and 24 for cases 2 and 3.
For the detection of ballooned neurons, all HE or HPS sections, including contusions, were screened at 200×.
Representative sections were stained with either hematoxylin–eosin (HE) or hematoxylin-phloxin-saffron (HPS). The following histochemical stains were used: iron, Luxol-periodic acid Schiff (Luxol-PAS) and Bielschowsky. The following antibodies were used for immunohistochemistry: glial fibrillary acidic protein (GFAP) (Leica, PA0026,ready to use), CD-68 (Leica, PA0073, ready to use), neurofilament 200 (NF200) (Leica, PA371, ready to use), beta-amyloid precursor-protein (β-APP) (Chemicon/Millipore, MAB348, 1/5000), αB-crystallin (EMD Millipore, MABN2552 1/1000), ubiquitin (Vector, 1/400), β-amyloid (Dako/Agilent, 1/100), tau protein (Thermo/Fisher, MN1020 1/2500), synaptophysin (Dako/Agilent, ready to use), TAR DNA binding protein 43 (TDP-43) ((Protein Tech, 10,782-2AP, 1/50), fused in sarcoma binding protein (FUS) (Protein tech, 60,160–1-1 g, 1/100), and p62 (BD Transduc, 1/25). In our index cases, the following were used for the evaluation of TAI: β-APP, GFAP, CD68 and NF200; for the neurodegenerative changes: αB-crystallin, NF200, ubiquitin, tau protein, synaptophysin, TDP-43, FUS were used.
For the characterization of the ballooned neurons only, two cases of fronto-temporal lobar degeneration, FTLD-Tau, were used as controls. One was a female aged 72 who presented with speech difficulties followed by neurocognitive decline and eye movement abnormalities raising the possibility of Richardson’s disorder. The other was a male aged 67 who presented with a primary non-fluent aphasia progressing to fronto-temporal demαentia. In both cases, the morphological findings were characteristic of a corticobasal degeneration.
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Publication 2023
Amyloid beta-Protein Precursor Amyloid Proteins Antibodies Broca Aphasia Cloning Vectors Congenital Abnormality Contusions Corpus Callosum Cortex, Cerebellar Cortex, Cerebral Corticobasal Degeneration Crystallins Dura Mater Eosin Eye Abnormalities Eye Movements Frontotemporal Lobar Degeneration FUBP1 protein, human Glial Fibrillary Acidic Protein Hematoxylin Immunohistochemistry Internal Capsule Iron Males Medial Frontal Gyrus Medulla Oblongata Mesencephalon Movement Movement Disorders neurofilament protein H Neurons Nucleus, Dentate Nucleus, Lenticular Occipital Lobe Periodic Acid phloxine Pons Proteins protein TDP-43, human RNA-Binding Protein FUS Saffron Sarcoma Seahorses Speech Spinal Cord Staining Synaptophysin Temporal Lobe Thalamus Ubiquitin White Matter Woman
We performed a quantitative DTI analysis of white matter microstructure alterations in POE. We selected white matter regions of interest (ROI) a priori that have been implicated in functional outcome and cognition (corpus callosum and external capsule). As we have performed previously (39 (link), 42 (link)–47 (link)), ROIs were traced by an observer masked to experimental conditions and analyzed using Bruker's Paravision 6.1 imaging software (Billerica, MA). In brief, fractional anisotropy (FA), axial diffusivity (λ1), and radial diffusivity (λ2+λ32)  scalar maps were computed, and means were calculated individually for each ROI. For bilateral neuroanatomical ROIs, scalar means were acquired on each side and averaged per ROI. Two scans (both in the Saline group) were excluded from analysis—one due to poor field of view coverage and one due to severe motion-related artifact.
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Publication 2023
Anisotropy Cognition Corpus Callosum Diffusion External Capsule Leukoaraiosis Microtubule-Associated Proteins Radionuclide Imaging Saline Solution White Matter
Brains of slightly anesthetized mice (P21–P53; isoflurane) were prepared into ice-cold sucrose-based cutting solution (in mM: 85 sucrose, 60 NaCl, 3.5 KCl, 6 MgCl2, 0.5 CaCl2, 38 NaHCO3, 1.25 NaH2PO4, 10 HEPES, 25 glucose). Coronal slices (250 µm) were cut (Vibroslice 7000smz, Campden Instruments, UK), incubated in artificial cerebrospinal fluid (aCSF; in mM: 120 NaCl, 3.5 KCl, 1 MgCl2, 2 CaCl2, 30 NaHCO3, 1.25 NaH2PO4, 15 glucose) supplemented with 5 mM HEPES, 1 MgCl2 for 30 min at 35 °C and allowed to recover at room temperature for at least 40 min.
MSN were identified as in20 (link). They were recorded in the current clamp configuration with the bridge mode enabled (EPC-10 amplifier, Patch- and Fitmaster software; HEKA, Lambrecht, Germany). The internal solution contained (in mM): 150 K-gluconate, 10 NaCl, 3 Mg-ATP, 0.5 GTP, 10 HEPES and 0.05 EGTA adjusted to pH = 7.3 and 310 mOsm with the liquid junction potential (15 mV) corrected online. Slices were perfused (2–3 ml/min, aCSF, 21–24 °C) in presence of the GABAAR antagonist gabazine (SR-95531, 10 µM, Sigma). All solutions were continuously oxygenated with 95% O2, 5% CO2 gas.
Glutamatergic excitatory afferents where stimulated intrastriatally with aCSF-filled theta-glass electrodes typically ~ 100–150 µm away from the MSN soma (position of stimulation electrode between MSN and corpus callosum). A bipolar voltage pulse (0.1 ms, ± 5 to ± 30 V) at 0.2 Hz induced subthreshold excitatory postsynaptic potentials (EPSPs; 4–10 mV). Following 10–15 min baseline recording synaptic plasticity was induced by a high frequency protocol (four 100 Hz tetani, 3 s long, separated by 30 s; holding potential − 70 mV). Recordings were rejected if the membrane potential was more positive than − 80 mV or the input resistance changed by more than 30%. We verified that no background long-term potentiation was present as APV ((2R)-amino-5-phosphonovaleric acid), a specific blocker of a subtype of glutamate receptors, did not alter the effect in wildtype mice9 (link).
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Publication 2023
Amino Acids Bicarbonate, Sodium Brain Cerebrospinal Fluid Cold Temperature Corpus Callosum Egtazic Acid Excitatory Postsynaptic Potentials gabazine gluconate Glucose Glutamate Receptor HEPES Isoflurane Long-Term Potentiation Magnesium Chloride Membrane Potentials Mus Neuronal Plasticity Pulse Rate Sodium Chloride SR 95531 Sucrose
Structural, diffusion, and resting-state functional MRIs were acquired on a Siemens 3T Trio Tim scanner using a 24-channel phased-array head coil. Diffusion tensor imaging and resting-state functional MRI scans were obtained with the same scanner using an identical protocol for all participants during a single visit. The Tracts Constrained by Underlying Anatomy (TRACULA) tool within FreeSurfer 7.124 was used for diffusion tensor imaging data processing and tractography to estimate the posterior probability of the 18 major white matter tracts. Among the 18 tracts, there were 5 tracts with segments that showed significant differences in both fractional anisotropy (FA) and mean diffusivity (MD) among the ELBW group (with or without PGF): the forceps major of the corpus callosum (Fmajor), right anterior thalamic radiation (RATR), left inferior longitudinal fasciculus, left superior longitudinal fasciculus–parietal bundle (LSLFP), and left superior longitudinal fasciculus–temporal bundle (Figure 1). The CONN toolbox25 was used for the seed-based functional connectivity analysis.26 (link) To select the region of interest as a seed, the multivoxel–multivariate pattern analysis method was used, which showed group differences in 4 regions: the precuneus, the left and right superior lateral occipital cortex (sLOC), and the posterior cingulate cortex (PCC) (eFigure 2 in Supplement 1). A seed-based functional connectivity analysis was performed for whole-brain regions with the selected 4 regions of interest in the multivoxel–multivariate pattern analysis. Functional connectivity strength values were extracted from the brain regions of the preterm infants (uncorrected height threshold of P < .001 and cluster-level false discovery rate–corrected P < .05). The diffusion metrics of the selected tracts and the FCS values were used in the correlational analysis with clinical and neuropsychological measures. Details are provided in the eMethods in Supplement 1.
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Publication 2023
Anisotropy Anterior Nuclear Group Brain Corpus Callosum Dietary Supplements Diffusion fMRI Forceps Head Occipital Lobe Posterior Cingulate Cortex Precuneus Preterm Infant Radiotherapy Semen Analysis TRIO protein, human White Matter
The comprehensive protocol for data quality management is available in eMethods 1 in Supplement 1. Demographic information, including sex, age, and modified Rankin Scale Score (which measures degree of disability or dependence after a stroke) at hospital admission, was recorded. Radiographic variables describing AVM morphological characteristics, including nidus location, size, diffuseness, venous drainage (drainage patterns, stenosis, and venous aneurysms), feeding arteries (number, dilation, multiple sources, and perforating arteries), associated aneurysm, and hemorrhagic presentation, were collected. Radiological information was determined via digital subtraction angiography and MRI.
The nidus location was regarded as deep if the lesion exclusively involved the brain stem, cerebellum, basal ganglia, thalamus, corpus callosum, or insular lobe. The definition of eloquent regions (ie, sensory, motor, language, or visual cortex; hypothalamus or thalamus; internal capsule; brain stem; cerebellar peduncles [superior, middle, or inferior]; and deep cerebellar nuclei) was based on the Spetzler-Martin Grading Scale.5 (link) The size of AVMs was dichotomized into small and large based on whether the maximum nidal diameter was less than 3 cm or 3 cm or greater. Ventricular system involvement was determined via MRI based on whether the nidal border was adjacent to the cerebral ventricular system. Feeding arteries were considered dilated when their diameter was at least twice that of the same blood vessel segments. Venous aneurysm was defined as the focal aneurysmal dilation of the proximal drainage vein.18 (link) Hemorrhagic presentation was defined as hemorrhage that could be ascribed to AVM rupture before or at admission.
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Publication 2023
Aneurysm Angiography, Digital Subtraction Arteries Basal Ganglia Blood Vessel Brain Stem Cerebellar Nuclei Cerebellum Cerebral Ventricles Cerebrovascular Accident Corpus Callosum Dietary Supplements Disabled Persons Drainage Hemorrhage Hypothalamus Insula of Reil Internal Capsule Stenosis Thalamus Veins Venous Engorgement Visual Cortex X-Rays, Diagnostic

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More about "Corpus Callosum"

The corpus callosum, also known as the great commissure, is the largest white matter structure in the human brain.
This critical brain region plays a pivotal role in facilitating interhemispheric communication, enabling the seamless exchange of sensory, motor, and cognitive information between the left and right cerebral hemispheres.
Researchers can leverage advanced tools and techniques to optimize their corpus callosum studies, such as PubCompare.ai, an AI-driven platform that helps identify cutting-edge protocols from the latest literature, preprints, and patents.
By utilizing AI-driven comparisons, researchers can pinpoint the most effective protocols and products, enhancing the reproducibility and accuracy of their corpus callosum research.
This, in turn, can lead to a deeper understanding of this vital brain structure and its impact on various neurological functions.
Corpus callosum studies often involve the use of specialized software and equipment, such as MATLAB for data analysis, Cuprizone for inducing demyelination, the RNeasy Mini Kit for RNA extraction, the VT1200S vibratome for tissue sectioning, Stereo Investigator software for stereological analysis, MetaMorph software for image processing, the BX51 microscope for high-resolution imaging, and the Image-Pro Plus system for advanced image analysis.
The Vibratome is a crucial tool for preparing thin tissue sections for various techniques, including immunohistochemistry and electron microscopy.
Additionally, the TRIzol reagent is commonly used for efficient RNA isolation, enabling researchers to study the molecular mechanisms underlying corpus callosum function and development.
By leveraging these state-of-the-art tools and techniques, researchers can enhance the quality, reproducibility, and impact of their corpus callosum studies, ultimately advancing our understanding of this critical brain structure and its role in various neurological processes.