B6D2F1 female mice were superovulated and mated with B6D2F1 males, and fertilized eggs were collected from the oviduct. The pronuclear stage eggs were injected with pX330 plasmids, hCas9 mRNA, and sgRNAs at indicated concentrations. The eggs were cultivated in kSOM overnight then transferred into the oviducts of pseudopregnant ICR females.
Fallopian Tubes
Fallopian Tubes: The hidden pathways of fertility.
Discover the secrets of these intricate structures that play a crucial role in human reproduction.
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Discover the secrets of these intricate structures that play a crucial role in human reproduction.
PubCompare.ai, your AI-powered platform, offers a seamless way to optimize your research protocols and identify the most effective products and procedures for your Fallopian Tube studies.
Effortlessly locate the best protocols from literature, pre-prints, and patents using our intelligent comparison tools.
Unleash the power of AI to improve your workflow and uncover the true potential of these remarkable anatomical features.
Explore the world of Fallopian Tubes with PubCompare.ai today!
Most cited protocols related to «Fallopian Tubes»
Eggs
Fallopian Tubes
Females
Males
Mice, House
Oviducts
Plasmids
RNA, Messenger
Zygote
DNA methylation data for 489 high stage, high grade serous ovarian tumors and eight normal fallopian tube samples was obtained from http://tcga.cancer.gov/dataportal/ . In addition, buffy coat samples from two female individuals were obtained. All data were generated with Illumina Infinium HumanMethylation 27 arrays, which interrogate 27,578 CpG sites located in proximity to the transcription start sites of 14,475 consensus coding sequencing in the NCBI Database (Genome Build 36). The level of DNA methylation at each probe was summarized with beta values ranging from 0 (unmethylated) to 1 (methylated) 58 (link).
The leukocyte methylation signature was derived as follows. Each probe was ranked by the difference in mean beta value in buffy coat and fallopian tube samples. We retained the 100 probes with the largest positive difference and the 100 with the largest negative difference between mean DNA methylation in normal fallopian tube tissues and peripheral blood leukocytes, designated BC and FT, (buffy coat and fallopian tube enriched, respectively). Let Tik denote the beta value for probe k in tumor sample i. Let Bk denote the average beta value of buffy coat samples for each probe. Let Tk denote the minimum observed beta value across all tumor samples for the BC probes and the maximum for the FT probes. Denote by fB the fraction of buffy coat components in the sample, then we have the following equation for each probe: Tik = BkfB + Tk(l−fB). Solving this equation for fB gives: fB = (Tik − Tk)/(Bk − Tk). The values of fB for each of the 200 probes in the signature were calculated and a kernel density estimate was obtained. The leukocyte signature was then calculated as the mode of this density estimate.
The leukocyte methylation signature was derived as follows. Each probe was ranked by the difference in mean beta value in buffy coat and fallopian tube samples. We retained the 100 probes with the largest positive difference and the 100 with the largest negative difference between mean DNA methylation in normal fallopian tube tissues and peripheral blood leukocytes, designated BC and FT, (buffy coat and fallopian tube enriched, respectively). Let Tik denote the beta value for probe k in tumor sample i. Let Bk denote the average beta value of buffy coat samples for each probe. Let Tk denote the minimum observed beta value across all tumor samples for the BC probes and the maximum for the FT probes. Denote by fB the fraction of buffy coat components in the sample, then we have the following equation for each probe: Tik = BkfB + Tk(l−fB). Solving this equation for fB gives: fB = (Tik − Tk)/(Bk − Tk). The values of fB for each of the 200 probes in the signature were calculated and a kernel density estimate was obtained. The leukocyte signature was then calculated as the mode of this density estimate.
DNA Methylation
Fallopian Tubes
Females
Genome
Leukocytes
Malignant Neoplasms
Methylation
Neoplasms
Ovary
Serous Neoplasms
Tissues
Transcription Initiation Site
Coitus
Dental Caries
Ethics Committees, Research
Fallopian Tubes
Females
Insemination
Males
Menstruation
Ovarian Stimulation
Pharmaceutical Preparations
Semen
Sperm
Sterility, Reproductive
Uterus
Woman
As our purpose was to compile a database of broader generalizations and larger sample size, we adopted less stringent eligibility criteria [28 (link)]. Three private, one in-house and 44 publicly available microarray ovarian cancer datasets from Gene Omnibus (GEO; http://www.ncbi.nlm.nih.gov/gds ), ArrayExpress (http://www.ebi.ac.uk/arrayexpress/ ), Expression Project for Oncology (ExpO; http://www.intgen.org/ ), and The Cancel Genome Atlas (TCGA; http://cancergenome.nih.gov/ ) were downloaded by Jan 2015 (Figure 1 ; Suppl. Table 1 ). Only datasets obtained using Affymetrix Microarrays HG-U133A (16.38%), HG-U133A2 (2.88%), HG-HT-U133A (17.25%), HG-U133-Plus2 (49.2%), and human gene 1.0 ST (14.29%) were used. These datasets are inclusive of primary and metastatic ovarian cancers, fallopian tube carcinoma, peritoneal carcinoma, ovarian cancer stroma, and normal ovarian surface epithelium, fallopian tube, and stroma tissues (Figure 2 ). No limit was imposed on the race, pre-treatment history or medical condition, stage, grade, or histology of the disease.
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Cancer of the Fallopian Tube
Carcinoma
Eligibility Determination
Epithelium
Fallopian Tubes
Generalization, Psychological
Genes
Genome
Inclusion Bodies
Microarray Analysis
Neoplasms
Ovarian Cancer
Ovary
Peritoneum
Tissues
Animals
Animals, Transgenic
Biopsy
Cells
Childbirth
Cloning Vectors
DNA, Complementary
Embryo
Fallopian Tubes
Integrase
Mice, Laboratory
Mice, Transgenic
Mothers
Oligonucleotide Primers
Recombination, Genetic
RNA, Messenger
Stem Cells
Tail
Zygote
Most recents protocols related to «Fallopian Tubes»
The sample collection process in the current study was approved by the Institute Review Board of Tongji Hospital (No. TJ-IRB20210838). Fallopian tubes were obtained from 23 premenopausal women (34–42 years old) undergoing hysterectomy. Luminal fluids were collected immediately after the uterus and the Fallopian tubes were resected, by flushing the lumen of the Fallopian tubes with 50 ml sterile PBS, as previously described (Bathala et al., 2018 ).
Fallopian Tubes
Hysterectomy
Phenobarbital
Specimen Collection
Sterility, Reproductive
Uterus
Woman
The animal experiment was approved by the ethical committee of Tongji Hospital (TJ-202111004). Eighty female (6–8 weeks of age) and ten male (8–10 weeks of age) Institute of Cancer Research (ICR) mice were used in the study. Female mice were injected i.p. with 10 IU pregnant mare’s serum gonadotrophin, followed by 10 IU hCG 48 h later. After the injection of hCG, two female mice were mated with one male mouse, for one night. Thirty-six hours after the hCG injection, the pregnant mice were identified and killed by cervical dislocation, and their Fallopian tubes were removed for two-cell embryo collection.
Cells
Embryo
Fallopian Tubes
Females
Human Chorionic Gonadotropin
Joint Dislocations
Males
Malignant Neoplasms
Mice, House
Neck
Pregnant Mare Serum Gonadotropins
A total of eight oEVs samples (isolated from the Fallopian tubes of eight women) were used for total RNA extraction, using the exoRNeasy Maxi Kit (Qiagen, Hilden, Germany) according to the manufacturer’s protocol. The quality of the RNA samples was examined using a NanoDrop 2000 spectrophotometer (Thermo Scientific, Waltham, MA, USA) and standard denaturing agarose gel electrophoresis. Small RNA library preparation was performed using TruSeq Small RNA Sample Prep Kits (Illumina, San Diego, CA, USA). The quality-ensured RNA-seq libraries were then sequenced using Illumina Hiseq2000/2500. Identification of known miRNAs (mapped to the miRbase database) and read counting were processed using ACGT101-miR (LC Sciences, Houston, TX, USA). A modified normalization was used to correct copy number among different samples, as described previously (Li et al., 2016 ), and a miRNA was considered present when the normalized read count was >0 in all the samples. A heatmap was constructed using the normalized read counts of the known miRNAs in each oEV sample, using R (R version 4.0.3) with a heatmap via a custom written R script.
DNA Library
Electrophoresis, Agar Gel
Fallopian Tubes
MicroRNAs
RNA-Seq
Woman
The Genotype-Tissue Expression (GTEx) database cataloged a large number of tissue-specific genotypes and shared regulatory expression quantitative trait loci (eQTL) variants. We used GTEx to identify the best expressed gene in the female reproductive tissues (bladder, cervix–ectocervix, endocerivx, fallopian tubes, ovaries, uterus, and vagina) that could impact PTB status at protein level [41 (link)]. After investigating the concerned genes/proteins with identified tissue-specific regulatory expression in female reproductive tissues, the Protein Data Bank (PDB) structural coverage details from previous reported studies were investigated from PDB [42 (link)].
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Cervix Uteri
Ectocervix
Fallopian Tubes
Females
Gene Expression Regulation
Genes
Genotype
Ovary
Polypyrimidine Tract-Binding Protein
Proteins
Quantitative Trait Loci
Reproduction
Tissues
Tissue Specificity
Urinary Bladder
Uterus
Vagina
MSCs were isolated from healthy fallopian tubes (hFTs) collected in DMEM/Hams F-12 medium (Invitrogen, Carlsbad, CA) and kept at 4 °C for processing within 24 h as described previously [15] (link). Briefly, hFTs were opened, washed twice in PBS (Gibco, Invitrogen, Carlsbad, CA) and incubated at 37 °C for 30 min in a 50 mL Falcon tube containing 5 mL of pure TrypLE™ Express (Invitrogen, Carlsbad, CA) with shaking. The supernatant was removed, washed once with 7 mL of advanced DMEM/Hams F12 in a 15 mL Falcon tube and centrifuged at 1000 rpm for 5 min at room temperature. The cells were then plated in advanced DMEM/Hams F12 (12 mL) supplemented with penicillin/streptomycin (100 µg/mL) in 75 cm3 polystyrene culture flasks and incubated at 37 °C in a humidified atmosphere containing 5.0% CO2 (Figure 1 ).
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ATF7IP protein, human
Atmosphere
Cells
Fallopian Tubes
Penicillins
Polystyrenes
Streptomycin
Top products related to «Fallopian Tubes»
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Hyaluronidase is an enzyme used in laboratory settings. It functions by breaking down hyaluronic acid, a component of the extracellular matrix.
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M2 medium is a cell culture media formulation designed for the maintenance and cultivation of mouse embryos. It provides the necessary nutrients and growth factors to support the development and growth of mouse embryos in an in vitro environment.
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The HCG (Human Chorionic Gonadotropin) is a laboratory equipment product by Merck Group. It is a hormone typically used in various diagnostic and research applications. The core function of HCG is to detect and measure the levels of this hormone in biological samples.
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Fetal Bovine Serum (FBS) is a cell culture supplement derived from the blood of bovine fetuses. FBS provides a source of proteins, growth factors, and other components that support the growth and maintenance of various cell types in in vitro cell culture applications.
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M16 medium is a culture medium used for the isolation and cultivation of microorganisms. It provides the necessary nutrients and growth factors for the growth and maintenance of microbial cultures in a laboratory setting.
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KSOM medium is a synthetic culture medium designed for the in vitro culture of mammalian embryos. It provides a defined and optimized environment for the growth and development of early-stage embryos.
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Bovine serum albumin (BSA) is a common laboratory reagent derived from bovine blood plasma. It is a protein that serves as a stabilizer and blocking agent in various biochemical and immunological applications. BSA is widely used to maintain the activity and solubility of enzymes, proteins, and other biomolecules in experimental settings.
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Penicillin/streptomycin is a commonly used antibiotic solution for cell culture applications. It contains a combination of penicillin and streptomycin, which are broad-spectrum antibiotics that inhibit the growth of both Gram-positive and Gram-negative bacteria.
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OVCAR3 is a cell line derived from a human ovarian adenocarcinoma. It is commonly used in research for the study of ovarian cancer.
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TRIzol reagent is a monophasic solution of phenol, guanidine isothiocyanate, and other proprietary components designed for the isolation of total RNA, DNA, and proteins from a variety of biological samples. The reagent maintains the integrity of the RNA while disrupting cells and dissolving cell components.
More about "Fallopian Tubes"
Fallopian Tubes: These intricate anatomical structures are essential for human reproduction, serving as the hidden pathways that transport the egg from the ovary to the uterus.
These remarkable features play a crucial role in fertility and deserve further exploration.
Discover the secrets of the Fallopian Tubes, an area of great scientific interest.
These tubular structures are lined with ciliated epithelial cells that help guide the egg on its journey.
Hyaluronidase, an enzyme found in the Fallopian Tubes, aids in the fertilization process by breaking down the protective layers surrounding the egg.
Optimizing research protocols is key to unlocking the full potential of Fallopian Tube studies.
PubCompare.ai, an AI-powered platform, offers a seamless way to identify the most effective products and procedures for your research needs.
Explore a vast database of literature, pre-prints, and patents to locate the best protocols, effortlessly comparing and contrasting different approaches.
Enhance your workflow with the power of AI.
PubCompare.ai can help you uncover the true secrets of the Fallopian Tubes, from the role of M2 medium and HCG in supporting egg development, to the importance of FBS and M16 medium in cell culture, to the use of Bovine serum albumin and Penicillin/streptomycin in maintaining a healthy environment.
Delve deeper into the world of Fallopian Tubes and their connection to fertility.
Discover how OVCAR3 cell lines and TRIzol reagent can be utilized in your research.
Unleash the power of AI to improve your research outcomes and uncover the extraordinary potential of these remarkable anatomical features.
These remarkable features play a crucial role in fertility and deserve further exploration.
Discover the secrets of the Fallopian Tubes, an area of great scientific interest.
These tubular structures are lined with ciliated epithelial cells that help guide the egg on its journey.
Hyaluronidase, an enzyme found in the Fallopian Tubes, aids in the fertilization process by breaking down the protective layers surrounding the egg.
Optimizing research protocols is key to unlocking the full potential of Fallopian Tube studies.
PubCompare.ai, an AI-powered platform, offers a seamless way to identify the most effective products and procedures for your research needs.
Explore a vast database of literature, pre-prints, and patents to locate the best protocols, effortlessly comparing and contrasting different approaches.
Enhance your workflow with the power of AI.
PubCompare.ai can help you uncover the true secrets of the Fallopian Tubes, from the role of M2 medium and HCG in supporting egg development, to the importance of FBS and M16 medium in cell culture, to the use of Bovine serum albumin and Penicillin/streptomycin in maintaining a healthy environment.
Delve deeper into the world of Fallopian Tubes and their connection to fertility.
Discover how OVCAR3 cell lines and TRIzol reagent can be utilized in your research.
Unleash the power of AI to improve your research outcomes and uncover the extraordinary potential of these remarkable anatomical features.