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Cerebrospinal Fluid

Cerebrospinal Fluid: A clear, colorless, and wtraer-like fluid that fills and surrounds the brain and spinal cord.
It is produced by the choroid plexus and other ependymal surfaces and reabsorbed mainly by the arachnoid villi.
Cerebrospinal fluid acts as a cushion or buffer for the central nervous system, providing mechanical and immunological protection as well as a means for the removal of waste products.

Most cited protocols related to «Cerebrospinal Fluid»

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Publication 2010
Adult Cerebrospinal Fluid Gray Matter Head Healthy Volunteers Males Radionuclide Imaging Sonata White Matter Woman

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Publication 2013
Brain Cerebrospinal Fluid ECHO protocol fMRI Homo sapiens Investigational New Drugs Magnetic Resonance Imaging Pharmaceutical Preparations TRIO protein, human White Matter

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Publication 2014
Brain Cerebrospinal Fluid Cortex, Cerebral derivatives Gray Matter Head Histocompatibility Testing Human Body Muscle Rigidity Tissues White Matter

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Publication 2017
Ankylosis Ants Brain Brain Stem Cerebellum Cerebrospinal Fluid Cortex, Cerebral Cranium CREB3L1 protein, human Dementia Embarc Genetic Heterogeneity Gray Matter Hybrids Reconstructive Surgical Procedures Tissues White Matter
A group of metabolites are considered to constitute a metabolite set if they are known to be: (1 ) involved in the same biological processes (i.e., metabolic pathways, signaling pathways); (2 (link)) changed significantly under the same pathological conditions (i.e., various metabolic diseases); and (3 (link)) present in the same locations such as organs, tissues, or cellular organelles. These data were collected through manual curation from books and journals as well as through text mining of public databases. The resulting metabolite sets were manually validated/edited and then further organized into three categories: pathway associated, disease associated, and location based. MSEA’s pathway-associated metabolite library contains 84 entries based on the 84 human metabolic pathways found in the Small Molecular Pathway Database (SMPDB) (17 (link)). MSEA’s disease-associated metabolite sets were mainly collected from the literature. Metabolites associated with different diseases were manually identified, merged and subsequently refined by reading the original publications listed in the Human Metabolome Database (HMDB) (18 (link)), the Metabolic Information Center (MIC), and SMPDB. Using these resources, a total of 851 physiologically informative metabolite sets were created. These disease-associated metabolite sets were further divided into three subcategories based on the biofluids in which they were measured: 398 metabolite sets in blood; 335 in urine; and 118 in cerebral–spinal fluid (CSF). MSEA’s location-based library contains 57 metabolite sets based on the ‘Cellular Location’ and ‘Tissue Location’ listed in the HMDB. A summary of these metabolite set libraries is shown in Table 1.

Overview of MSEA’s metabolite set libraries

CategoryTotal numberSourcesWeb links
Pathway based84SMPDBhttp://www.smpdb.ca
Disease—associated851
    Blooda398HMDBhttp://www.hmdb.ca/disease_browse
    Urinea335MIChttp://www.metagene.de
    CSFa118PubMedhttp://www.ncbi.nlm.nih.gov/pubmed
Location based57HMDBhttp://www.hmdb.ca/

aMetabolite sets were collected from multiple sources including HMDB, MIC, PubMed and SMPDB.

Publication 2010
Biological Processes BLOOD cDNA Library Cells Cerebrospinal Fluid Homo sapiens Metabolic Diseases Metabolome Organelles Pathologic Processes Signal Transduction Pathways Tissues Urine

Most recents protocols related to «Cerebrospinal Fluid»

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Publication 2023
Agar Anesthesia Anesthetics Animals Bone Screws Brain Cerebrospinal Fluid Cortex, Cerebral Craniotomy Cranium Dehydration Dura Mater Eye Movements Ferrets Glucose Isoflurane Ketamine Lactated Ringer's Solution Operative Surgical Procedures Oxide, Nitrous Oxygen Pentobarbital Sodium physiology Punctures Rate, Heart Reading Frames Respiratory Rate Rocuronium Bromide Saline Solution Saturation of Peripheral Oxygen Scalp Temporal Muscle Tissues Trachea Tracheostomy Visual Cortex Xylazine

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Publication 2023
Cerebrospinal Fluid Eye fMRI Head Radionuclide Imaging Reading Frames Tandem Mass Spectrometry TRIO protein, human White Matter
Animals were anesthetized with isoflurane. After decapitation, the brain was quickly transferred to the frozen cutting solution (containing, in mM, 15 KCl, 3.3 MgCl2, 110 K-gluconate, 0.05 EGTA, 5 HEPES, 25 glucose, 26.2 NaHCO3 and 0.0015 (±)-3-(2-carboxypiperazin-4-yl)propyl-1-phosphonic acid) with carbogen gas (95% O2 and 5% CO2). The brain was sliced into 250-µm thick sections using a vibratome (VT1200S, Leica), and transferred into artificial cerebrospinal fluid (aCSF, containing, in mM, 124 NaCl, 3 KCl, 2 MgCl2, 2 CaCl2, 1.23 NaH2PO4, 26 NaHCO3, 25 glucose) with carbogen gas (95% O2 and 5% CO2) at 35 °C for at least 1 h, then at room temperature covered with aluminum foil to avoid light exposure. An amplifier (Multiclamp 700B, Molecular Devices) and a digitizer (Axon Digidata 1550B, Molecular Devices) were used for patch clamp recording. The recording chamber was perfused with aCSF saturated with carbogen gas (95% O2 and 5% CO2) at room temperature. A glass pipette (GC150-10; Harvard Apparatus) was made with a puller (P-1000, Sutter Instrument) and its resistance was between 2.8 and 7 MΩ. The pipette was loaded with K-gluconate-based pipette solution (in mM, 138 K-gluconate, 8 NaCl, 10 HEPES, 0.2 EGTA-Na3, 2 Mg-ATP, and 0.5 Na2-GTP, pH 7.3 with KOH) for whole-cell recording, or aCSF for loose cell recording. Under an epifluorescent microscope (BX51WI, Olympus), 505 nm LED illumination (74 µW/mm2, 100 ms, Niji, Blue Box Optics) was used to visualize native EYFP fluorescence from ACR2-EYFP. We identified LC-NA neurons by a combination of anatomical location, triangular cellular shape, and fluorescence observed in the recording area. In Fig. 2, the membrane potential was held at − 60 mV for measuring current deflection. In Fig. 3, the membrane potential was held from − 120 to − 40 mV in 20 mV steps with a duration of 700 ms. The voltage deflection was evaluated at a current holding of 0 pA. Clampex 11.0.3 (Molecular Devices) was used to record the data.
Publication 2023
Aluminum Animals ARID1A protein, human Axon Bicarbonate, Sodium Brain carbogen Cells Cell Shape Cerebrospinal Fluid Decapitation Egtazic Acid Eye Fluorescence Freezing gluconate Glucose HEPES Isoflurane Light Magnesium Chloride Medical Devices Membrane Potentials Microscopy Neurons phosphonic acid Sodium Chloride
For fMRI data, the pre-processing was performed using SPM12 (Wellcome Department of Imaging Neurosciences, University College London, UK, http://www.fil.ion.ucl.ac.uk/spm), and the statistical analyses of imaging data were performed using GRETNA (GRETNA v2.0) in Matlab R2021b. First, the first 10-time point-scanned images were removed owing to the instability of the magnetic field at the beginning of the scan. Second, all functional images were realigned to the first image to correct head movement. All participants met the criteria of < 2 mm translation and < 2° rotation in any direction. Otherwise, their data were excluded. Third, the functional images were normalized to the MNI space using DARTEL and resampled to a 3 × 3 × 3 mm3 voxel size62 (link). Fourth, we used an anisotropic 6-mm full-width half-maximum Gaussian kernel63 for spatial smoothing of the obtained images. Fifth, we detrended and removed linear trends. Sixth, we removed covariates, excluding white matter, grey matter, and cerebrospinal fluid influences. Seventh, 0.01‒0.08 Hz bandpass filtering was used to remove high and low-frequency signals. Eighth, we removed the FD_Threshold > 0.5 mm time points by “scrubbing” 1-time point before and 2-time points after. In summary, the pre-processing procedures included slice timing correction, realignment, normalization, smoothing, detrending, filtering, and scrubbing.
Publication 2023
Anisotropy Cerebrospinal Fluid fMRI Gray Matter Head Movements Magnetic Fields Radionuclide Imaging White Matter
After fixation of mice, the microdialysis-guided cannula was inserted into the hippocampus (coordinate: A, −1.8; L, +1.5; H, −1.0 mm from bregma) and the cortex (coordinate: A, +1.5; L, +1.5; H, −1.0 mm from bregma) of mice. Microdialysis studies were conducted 7 days later. CMA 7 Metal Free probe (CMA, Sweden) with a 1-mm and 6-kDa-cutoff regenerated cellulose membrane was inserted gently through the CMA 7 guide cannula. The probe was equilibrated with artificial cerebrospinal fluid at a flow rate of 1 μL/min for 1 h prior to initiation of dialysis. After that, baseline samples were collected into vials for 30 min, then mice were injected with tutin and dialysates were collected every 30 min for 1 h. Microdialysis samples were dried under vacuum centrifugation, and re-dissolved with deionized water. After benzoylation reaction, the standard or samples were analyzed by LC-MS.
Publication 2023
Cannula Centrifugation Cerebrospinal Fluid Cortex, Cerebral Dialysis Dialysis Solutions Metals Mice, House Microdialysis regenerated cellulose Seahorses Tissue, Membrane tutin Vacuum

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More about "Cerebrospinal Fluid"

Cerebrospinal fluid (CSF) is a clear, colorless, and watery-like fluid that fills and surrounds the brain and spinal cord.
It is produced by the choroid plexus and other ependymal surfaces, and is reabsorbed mainly by the arachnoid villi.
CSF acts as a cushion or buffer for the central nervous system, providing mechanical and immunological protection, as well as a means for the removal of waste products.
Optimizing cerebrospinal fluid research can be a complex task, but PubCompare.ai's AI-driven protocol comparison tool can help streamline the process.
This tool allows researchers to easily locate the best protocols from literature, pre-prints, and patents, while ensuring enhanced reproducibility and accuracy.
By leveraging AI-powered comparisons, researchers can identify the optimal protocols and products for their CSF studies, taking their research to new heights.
When it comes to CSF collection and analysis, various tools and instruments can be utilized, such as the VT1200S and VT1000S vibratomes, the Multiclamp 700B amplifier, and MATLAB software.
These tools can assist with tasks such as brain and spinal cord tissue sectioning, electrophysiological recordings, and data analysis, respectively.
By incorporating these technologies into their research workflow, scientists can enhance the accuracy, efficiency, and reproducibility of their cerebrospinal fluid studies.
In summary, cerebrospinal fluid is a crucial component of the central nervous system, and optimizing research in this area can be greatly aided by the use of advanced tools and technologies.
With the help of PubCompare.ai's AI-driven protocol comparison tool and other innovative instruments, researchers can unlock new insights and push the boundaries of their cerebrospinal fluid investigations.