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Glycocalyx

Glycocalyx is a complex carbohydrate-rich structure found on the surface of many cell types, particularly those lining blood vessels.
This extracellular matrix plays a crucial role in cellular signaling, immune function, and maintaining the integrity of endothelial barriers.
Glycocalyx analysis provides valuable insights into the pathophysiology of various diseases, including cardiovascular, metabolic, and inflammatory disorders.
PubCompare.ai's AI-driven research optimization tools can help locate the best protocols from literature, pre-prints, and patents, unlocking valuable insights and streamlining your glycocalyx research effortlessly.
Explore PubCompare.ai today and take your glycocalyx analysis to new heighs.

Most cited protocols related to «Glycocalyx»

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Publication 2014
Animals Blood Glucose Body Weight Catheters Cells Enzyme-Linked Immunosorbent Assay Glucose Glycocalyx Grafts Homo sapiens Immunologic Deficiency Syndromes Insulin Kidney Mice, hr Mice, Laboratory Obstetric Delivery Paraffin Embedding SCID Mice Serum
All procedures performed were protocols approved by the University of Texas Houston Medical School Animal Welfare Committee. The experiments were conducted in compliance with the National Institutes of Health guidelines on the use of laboratory animals. All animals were housed at constant room temperature with a 12:12-h light-dark cycle with access to food and water ad libitum. Male C57BL/6J mice, 8–10 weeks of age were used for all experiments. To mimic the clinical scenario of trauma-induced coagulopathy in patients in shock, the coagulopathic mouse model of trauma-hemorrhagic shock described by Cohen et al was employed.15 (link) In brief, under isoflurane anesthesia, a 2cm midline laparotomy incision was made, organs inspected, and the incision closed. The bilateral femoral arteries were cannulated for continuous hemodynamic monitoring and blood withdrawal or resuscitation, respectively. After 10-minute period of equilibration, mice were bled to a mean arterial pressure (MAP) of 35±5 mmHg and maintained for 90 minutes. Shams underwent anesthesia and placement of catheters but were not subjected to hemorrhagic shock. Similar to Cohen et al, mouse were coagulopathic with a PT 12.1± 0.6 after hemorrhagic shock vs. 7.5 ± 0.2 sham, p=0.02. Mice were resuscitated over the next 15 minutes with either lactated Ringer’s at 3X shed blood volume16 (link) or fresh frozen plasma at 1X shed blood volume and compared to animals that underwent shock alone. At the conclusion of resuscitation, vascular catheters were removed, incisions closed, and the animals were awoken from anesthesia. After three hours, animals were sacrificed by exsanguination under isoflurane anesthesia. Blood was obtained at the time of sacrifice and lungs harvested for further analysis. The three hour time point was chosen based on our previous investigation showing that the endothelial glycocalyx was being restored by three hours of resuscitation.9 (link)
Publication 2013
Anesthesia Animals Animals, Laboratory BLOOD Blood Coagulation Disorders Blood Volume Catheters Endothelium Exsanguination Femoral Artery Food Glycocalyx Isoflurane Lactated Ringer's Solution Laparotomy Lung Males Mice, House Mice, Inbred C57BL Patients Plasma, Fresh Frozen Resuscitation Shock Shock, Hemorrhagic Vascular Catheters Wounds and Injuries
The process of generating PDX models in mice from fresh primary or metastatic human cancer is extensively described in the literature (10 , 13 (link)). While individual groups have developed specific methodological approaches, the fundamentals are common. Table 1 provides a summary of approaches used to generate the most comprehensive PDX collections currently available. Briefly, pieces of primary or metastatic solid tumors maintained as tissue structures are collected by surgery or biopsy procedures. Some studies have also used fluid drained from malignant ascites or pleural effusions. Tumors are implanted as pieces or single cell suspensions, either alone or in some studies coated with matrigel or mixed with human fibroblasts or mesenchymal stem cells. The most common site of implantation is on the dorsal region of mice (subcutaneous implantation), although implantation in the same organ as the original tumor may be an option (orthotopic implantation, i.e. pancreas, oral cavity, ovary, mammary fat pad, brain, etc.). In addition, independently of the tumor origin, several approaches have implanted primary tumors in the renal capsule in an effort to increase engraftment success rates. A variety of mouse strains having different degrees of immunosuppression have been used in these studies. Supplementary Table 1 lists the principal characteristics of the most commonly used mouse strains including their level of immune suppression as well as advantages or disadvantages. For hormone sensitive tumors, some studies have used hormone supplementation with the intent of increasing engraftment rates.
Some approaches may have theoretical advantages with regard to higher and faster engraftment rates and generation of models that better recapitulate human tumors and are, therefore, more predictive. However, it is important to mention that very few studies have properly addressed comparative implantation methods for these endpoints. Studies in which PDX models have been generated simultaneously from primary tumors and metastatic lesions suggest that metastases have a higher engraftment rate (14 (link), 15 ). Defining the most appropriate host mouse strains to generate PDX models is an important consideration. It is assumed that more severely immunosuppressed models such as non-obese diabetic/severe combined immunodeficiency disorder (NOD/SCID) or NOD/SCID/IL2λ-receptor null (NSG) models are better suited for PDX generation due to higher engraftment rates. Indeed, these are the preferred rodent strains for many groups. However, in human breast cancer (HBC) where this question has been robustly interrogated, implantation in NOD/SCID versus NSG mice yielded similar take rates (16 (link)). In addition, host supplementation with estradiol pellets increased engraftment rates from 2.6 to 21.4 % while, for reasons that are unclear, co-implantation with immortalized human fibroblasts decreased engraftment rate (16 (link)). In contrast, in another study, a mixture of irradiated and non-irradiated human fibroblasts provided improved results (17 (link)). Likewise orthotopic tumor implantation (“orthoxenografts”, (18 (link))) may also confer a translational advantage, as the tumor develops in the same anatomical microenvironment. Generation of orthoxenografts is more labor-intensive, requires complex surgery, is more expensive and often requires imaging methods to monitor tumor growth. However, for several tumor types (e.g. ovarian cancer or lung cancer), this approach substantially increases tumor take rates (19 (link)). In this vein, orthotopic implantation in the testis is essential for the growth of testicular germ cell tumors. As for tumor implantation in the renal capsule, it yielded an impressive 90 % engraftment rate in non-small cell lung cancer (NSCLC) as compared to 25% following subcutaneous implantation, although these results were not obtained from a single comparative study (20 (link), 21 (link)). Furthermore, renal cell capsule implantation shortens time to engraftment, which is one of the most important variables for studies seeking to implement real time PDX data for personalized cancer treatment (20 (link)).
Publication 2014
Ascites Biopsy Brain Breast Capsule Cells Estradiol Fibroblasts Genes, Neoplasm Glycocalyx Homo sapiens Hormones Immunosuppression Kidney Kidney Neoplasm Lung Cancer Malignant Neoplasms Mammary Carcinoma, Human matrigel Mesenchymal Stem Cells Mus Neoplasm Metastasis Neoplasms Non-Small Cell Lung Carcinoma Obesity Obstetric Labor Operative Surgical Procedures Oral Cavity Ovarian Cancer Ovary Ovum Implantation Pad, Fat Pancreas Pellets, Drug Pleural Effusion Protein Biosynthesis Rodent SCID Mice Strains Testicular Germ Cell Tumor Testis Tissues Veins
To detect endothelial glycocalyx using electron microscopy [21 (link)], mice were anesthetized and perfused with a solution composed of 2% glutaraldehyde, 2% sucrose, 0.1 M sodium cacodylate buffer (pH 7.3), and 2% lanthanum nitrate through a cannula placed in the left ventricle 48 h after LPS administration [22 (link)]. Before perfusion, an incision was made in the right atrial appendage, and the neck was ligated with a silk suture. In addition, a perfusion pump was used for injection at a steady rate of 1 ml/minute.
Thereafter, the left ventricle, liver, and kidney were harvested and diced. Three or four pieces of approximately 1 mm3 each were immersed in the perfusion solution for 2 h for fixation and then soaked overnight in a solution without glutaraldehyde before being washed in alkaline (0.03 mol/L NaOH) sucrose (2%) solution. The specimens were then dehydrated through a graded ethanol series.
The frozen fracture method was used to prepare samples for examination using scanning electron microscopy (SEM). Each sample was laid on an iron plate chilled with liquid nitrogen, and ethanol was sprinkled onto it. Once the ethanol was frozen, the sample was fractured using a chisel such that it was not touched directly. The samples were then incubated in tert-butyl alcohol at room temperature. After the tert-butyl alcohol had solidified, it was freeze-dried, and the specimens were examined using SEM (S-4500; Hitachi, Tokyo, Japan). In addition, for further elemental analysis of each sample, energy-dispersive X-ray spectroscopy was performed under SEM.
To prepare samples for transmission electron microscopy (TEM), each specimen was embedded in epoxy resin. Ultrathin sections (90 nm) stained with uranyl acetate and lead citrate were then examined using TEM (HT-7700; Hitachi). For usual electron microscopy, 2.5% glutaraldehyde in 0.1 mol/L phosphate buffer (pH 7.4) was used instead of perfusion buffer as described above.
Publication 2017
Atrium, Right Auricular Appendage Buffers Cacodylate Cannula Citrates Electron Microscopy Endothelium Energy Dispersive X Ray Spectroscopy Epoxy Resins Ethanol Freezing Glutaral Glycocalyx Infusion Pump Iron Kidney lanthanide nitrate Left Ventricles Liver Mice, House Neck Nitrogen Perfusion Phosphates Scanning Electron Microscopy Silk Sodium Sucrose Sutures tert-Butyl Alcohol Transmission Electron Microscopy uranyl acetate
Thickness and stiffness of the eGC were determined using the Atomic Force Microscope (AFM) nanoindentation technique. Preservation of the endothelial cell layer on aorta preparations was approved by immunostaining of PECAM-1/CD31 (Figure 1). Figure 2 A, B illustrates the basic principles of this method. By using a Multimode AFM (Veeco, Mannheim, Germany) with a feedback-controlled heating device (Veeco) measurements were performed at 37°C as described previously [29 (link)].
In brief, the central component of the AFM is a very sensitive mechanical nanosensor – a triangular cantilever with a mounted spherical tip (here: electrically uncharged polystyrene, diameter = 10 µm, Novascan, Ames, IA, USA) that is utilized to periodically indent the cells. A spherical tip was used for this AFM approach instead of a sharp tip because of a larger interaction area between tip and sample that decreases the effective pressure and results in less mechanical noise [30 (link)]. The cantilever functions as a soft spring (spring constant = 11 pN/nm). The xyz-position of the tip is precisely controlled by a piezo-element (Figure 2 A). A laser beam is reflected by the gold-coated backside of the cantilever to a position-sensitive quadrupled photodiode allowing measurements of the cantilever deflection (V). Determination of the spring constant (Kcant) by the thermal tuning method and measurement of the deflection sensitivity (α) of the cantilever on bare glass coverslips facilitate the calculation of the force (F) acting on the cantilever and, in turn, the force exerted by the cantilever to the sample.
Since the piezo displacement (xpiezo) and the deflection sensitivity (α) are known, the indentation depth (deformation) of the sample (xsample) can be calculated.
For reasons of readability the indentation depth is hereafter called “thickness”. It should be noted that the indentation depth rather represents an apparent thickness, rather than the exact anatomical thickness.
Force indentation curves of a single cell were obtained by plotting the force (F) necessary to indent the cell (indentation depth, xsample). The sample stiffness can be derived from Hook´s law.
The stiffness (K) is the mechanical resistance of a sample against a defined deformation (e.g. indentation). K depends strongly on the indentation depth and the location, because cells contain a variety of substructures and organelles. The experimental parameters including an indentation velocity of 1 µm/s, a loading force of approximately 400 pN, an indentation frequency in the range of 0.25 - 0.5 Hz, a ramp size of 2 µm, a trig threshold of 35 nm and a tip velocity of 0.5 - 1 µm/s.
Previous experiments, using 1 µm AFM-tips, showed that the glycocalyx thickness is somewhat variable [29 (link),31 (link)]. Since we were interested in the overall condition of the glycocalyx and especially in its changes induced by different stimuli, we here chose larger tips (10 µm), as they indent a larger area. Thus they provided “more averaged” results and enabled us to avoid the data being influenced by the spatial distribution of the eGC thickness. All measurements were performed in HEPES-buffered solution [standard composition in millimolars: 140 NaCl, 5 KCl, 1 MgCl2, 1 CaCl2, 5 Glucose, 10 HEPES (N-2-hydroxyethylpiperazine-N′-2-ethanesulfonic acid), pH 7.4] supplemented with 1% FCS in order to prevent eGC collapse [32 (link)].
Light microscopy was used to ensure that the tip position of the mechanical nanosensor was located neither at the nuclear, nor at the junctional region of cultured endothelial cells. However, this approach was not feasible in (thick) explanted aortas due to the lack of transparency of sub-endothelial layers such as the Tunica media and T. externa.
Figure 3 A, B show typical force indentation curves of an untreated as well as heparinase-treated aortic endothelial cell (“overview mode”). Each force indentation curve was then analyzed separately with a higher magnification (“working mode”) by using a linear approximation for determination of the eGC nanomechanics (Figure 3 C).
Publication 2013
Aorta Biologic Preservation CD31 Antigens Cells Cultured Cells Electricity Endothelial Cells Endothelium Glucose Glycocalyx Gold Heparin Lyase HEPES Hypersensitivity Light Microscopy Magnesium Chloride Medical Devices Microscopy, Atomic Force Mineralocorticoid Excess Syndrome, Apparent Organelles Polystyrenes Pressure Shock Sodium Chloride Tunica Media Van der Woude syndrome

Most recents protocols related to «Glycocalyx»

In patients undergoing aortic valve replacement, HSI parameters were measured before the aortic valve implantation (t1), directly after the aortic valve implantation procedure (t2), and on the third postinterventional day (t3). Blood samples and hemodynamic parameters were collected, respectively. Blood samples from central and arterial lines for the measurement of the pCO2 gap and central venous oxygen saturation (ScvO2) could only be collected at t1 and t2 due to early removal of the catheters. Demographic data, comorbidity, medication and data concerning the procedure, blood loss, administered fluids, catecholamines, and anesthetics were documented. To evaluate endothelial glycocalyx integrity, serum syndecan-1 was measured by ELISA (R&D Systems). Echocardiography, performed by a cardiologist, was used to determine the preinterventional aortic valve opening area and the pre- and postinterventional ejection fraction. To evaluate the postinterventional survival and physical functioning, the patients were contacted by telephone 120 days after TAVI. To assess physical capacity, we used the scales Physical Functioning, Energy/Fatigue, Role Limitations due to Physical Health, and General Health of the Short Form-36 survey (12 (link), 13 (link)). Each item is scored from 0 to 100, with high values representing the favorable health condition. The scales are calculated as the mean of the respective items.
Publication 2023
Anesthetics Arterial Lines BLOOD Cardiologists Catecholamines Catheters Echocardiography Endothelium Enzyme-Linked Immunosorbent Assay Fatigue Glycocalyx Hemodynamics Hemorrhage Ovum Implantation Oxygen Saturation Patients Pharmaceutical Preparations Physical Examination SDC1 protein, human Serum Valves, Aortic Veins
To image the endothelial glycocalyx, an Alexa Fluor 594-conjugated wheat germ agglutinin (WGA, Thermo Fischer Scientific, W11262, dilution 2 μg/ml), anti-heparan sulfate antibody (Abcam, Cambridge, UK, ab23418, 1:100), and peanut agglutinin (PNA, Vector Labs, Ontario, CA, FL-1071-5, 1:200) were used. Cells were cultured to confluence on coverslips and exposed to cyclosporine as described. Cells exposed to 500 mU/mL neuraminidase for 1 h were used as a positive control in WGA and PNA experiments. Cells exposed to 0.5 U/mL Heparinase III (H8891-5UN, Sigma-Aldrich, St. Louis, MO) for 30 min were used as a positive control in heparan sulfate experiments. Cells were incubated with Alexa Fluor 594-conjugated WGA for 5 min on ice and washed two times with ice-cold HBSS, and the coverslips were mounted in a Chamlide magnetic chamber (Life Cell Instrument, Seoul, Korea) and overlaid with media. Confocal microscopy was performed as detailed in Supplementary material, and total fluorescence intensity was measured using ImageJ software. For experiments using anti-heparan sulfate and PNA, cells were washed and fixed with 2% paraformaldehyde, followed by incubation with mouse anti-heparan sulfate (1:100) and anti-PNA (1:100) for 1 h. Alexa Fluor 488-conjugated species-specific secondary antibodies were used at a dilution of 1:1,000. Nuclei of cells were stained with 0.12 μg/ml Hoechst stain (Thermo Fisher Scientific, Waltham, MA) for 5 min.
Publication 2023
Alexa594 alexa fluor 488 Antibodies Antibodies, Anti-Idiotypic Cell Nucleus Cells Cloning Vectors Common Cold Cyclosporine Endothelium Fluorescence Glycocalyx Hemoglobin, Sickle heparinase III Microscopy, Confocal Mus Neuraminidase paraform Peanut Agglutinin Stains Sulfate, Heparan Technique, Dilution Wheat Germ Agglutinins
DNA from WBC was either obtained from a separate EDTA test tube, when available, or from the buffy coat cells in the Streck® tubes. DNA was isolated from 2–3.5 mL blood using EZ1 DNA Tissue Kit (Qiagen, Hilden, Germany) or on Qiasymphony (Qiagen, Hilden, Germany) at the Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden. A buffer change to nuclease-free water using AMPure XP according to the manufacturers’ instructions (Beckman Coulter, IN, USA) was performed before library preparation. 59–250 ng blood DNA was sequenced in the same pipeline as the cell-free DNA.
Publication 2023
BLOOD Buffers Cell-Free DNA DNA Library Edetic Acid Glycocalyx Tissues
The specimens were divided into two fragments, one for histological analyses by light microscopy and the other for morphological analyses by transmission electron microscopy (TEM). For TEM analyses, the lymphatic vessels and veins were fixed in 2.5% glutaraldehyde in 0.1 M cacodylate buffer (pH 7.4), containing 0.05% (w/v) Alcian Blue 8GX, at 4 °C over-night and post-fixed in 2% buffered osmium tetroxide for 1 h. The specimens were then dehydrated with graded concentrations of acetone and embedded in Araldite epoxy resin (Durcupan ACM, Fluka, Sigma-Aldrich Co., St. Louis, MO, USA) according to standard protocols.
For orientation, semi-thin sections (1.5 μm) were cut on a Reichert Ultracut S ultramicrotome using glass knives and stained with a 1% aqueous solution of toluidine blue and examined with an optical microscope (Nikon Eclipse E800). Ultrathin sections (90 nm) were prepared with an ultramicrotome (Reichert UltracutS) and counterstained with uranyl acetate in saturated solution and lead citrate according to Reynolds and observed under transmission electron microscope (TEM Zeiss EM 910, Zeiss, Wetzlar, Germany) at 80,000× magnification. The depth of the glycocalyx was measured near the surface, where the plasma membrane was visible.
Publication 2023
Acetone Alcian Blue araldite Cacodylate Citrates Durcupan ACM Epoxy Resins Glutaral Glycocalyx Light Microscopy Microtomy Osmium Tetroxide Plasma Membrane Tolonium Chloride Transmission Electron Microscopy Ultramicrotomy uranyl acetate Veins Vessel, Lymphatic
To analyze peroxynitrite protein damage in ECs, indicated by the formation and presence of protein nitrotyrosine residues (3NT), an immunohistochemical nitrotyrosine staining was performed on HUVECs and paraffin-embedded RCA rings. With regard to the in vitro staining, HUVECs were cultured in Nunc Lab-Tek chamber slides (BD Biosciences) and exposed to secondary CPPs for 24 hours. After the stimulation, cells were fixed in 2% PFA and permeabilized with 0.5% Triton-X-100. Next, cells were blocked in 5% BSA-PBS and 0.1% H2O2 for 30 minutes at RT, followed by incubation with the primary anti-3NT antibody (#39B6, 1:50, Santa Cruz Biotechnologies) in 1% BSA-PBS at 4 °C overnight. Cells were blocked with both avidin and biotin for 15 minutes at RT (#SP-2001, Avidin-biotin kit, Vector Laboratories). For detection of the primary antibody, an isotype-specific IgG2a secondary antibody (#1081-08, 1:100, Southern Biotech, goat anti-mouse Biotin) and streptavidin-HRP conjugate diluted in 1% serum-PBS were used (#P039701-2, DAKO). Thereafter, tissue sections were incubated with 3’-diaminobenzidine (DAB) and counterstained with hematoxylin. Finally, stained HUVECs were mounted with Kaiser’s glycerol gelatin. Stained sections were scanned with the Hamamatsu slide scanner (Hamamatsu, Japan) and analyzed with the ImageJ Software.42 (link) Graphs showed the mean pixel intensity expressed as delta (Δ) to the experimental control.
For staining the RCA rings, a similar protocol was followed with a few modifications. Briefly, the tissue sections were deparaffinized, followed by overnight antigen retrieval in 10 mmol/L Tris-HCl (pH=9) at 80 °C. Tissue sections were blocked in 5% BSA-PBS and 0.1% H2O2 for 30 minutes at RT and incubated with the primary anti-3NT antibody (#39B6, 1:50, Santa Cruz Biotechnologies) in 1% BSA and 5% serum-PBS for 3 hours at RT. For the detection of the primary antibody, a donkey anti-mouse Alexa Fluor 647-conjugated secondary antibody (#A-31571, Invitrogen) was used. Additionally, tissue sections were incubated with Lycopersicon esculentum Lectin (LEA; #FL-1171, 1:100, Vector Laboratories) to visualize the endothelial glycocalyx. Nuclei were visualized with DAPI and sections were mounted with CitiFluor mounting medium. Stained sections were scanned the Olympus slide viewer VS200 (Olympus Nederland B.V., the Netherlands) and analyzed with the ImageJ Software afterward.42 (link) For analysis, 5 random LEA positive areas were selected, in which the mean fluorescent intensity of the 3NT positive pixels were quantified per sample.
Publication 2023
3-nitrotyrosine Alexa Fluor 647 Antibodies, Anti-Idiotypic Antigens Avidin Biotin Cell Nucleus Cells Choroid Plexus Papilloma Cloning Vectors DAPI Endothelium Equus asinus Gelatins Glycerin Glycocalyx Goat Hematoxylin IgG2A Immunoglobulin Isotypes Immunoglobulins Mus Paraffin Peroxide, Hydrogen Peroxynitrite Proteins Serum Streptavidin Tissues tomato lectin Triton X-100 Tromethamine

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Fetal Bovine Serum (FBS) is a cell culture supplement derived from the blood of bovine fetuses. FBS provides a source of proteins, growth factors, and other components that support the growth and maintenance of various cell types in in vitro cell culture applications.
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Syndecan-1 is a cell surface proteoglycan that acts as a co-receptor for various growth factors and extracellular matrix components. It is involved in cell adhesion, migration, and signaling processes.
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TRIzol reagent is a monophasic solution of phenol, guanidine isothiocyanate, and other proprietary components designed for the isolation of total RNA, DNA, and proteins from a variety of biological samples. The reagent maintains the integrity of the RNA while disrupting cells and dissolving cell components.

More about "Glycocalyx"

Glycocalyx, a complex carbohydrate-rich structure found on the surface of numerous cell types, particularly those lining blood vessels, plays a crucial role in cellular signaling, immune function, and maintaining the integrity of endothelial barriers.
This extracellular matrix is essential for a variety of physiological processes and serves as a valuable biomarker for various diseases, including cardiovascular, metabolic, and inflammatory disorders.
Analyzing the glycocalyx can provide invaluable insights into the pathophysiology of these conditions.
FBS (Fetal Bovine Serum) and Histopaque-1077 can be utilized in cell culture and isolation procedures to study the glycocalyx, while the Maxwell® RCS blood DNA kit and BZ-X810 imaging system can aid in the analysis and visualization of this structure.
DMEM (Dulbecco's Modified Eagle Medium) and L-glutamine are commonly used in cell culture media to support the growth and maintenance of cells, which can be essential for glycocalyx research.
Syndecan-1, a cell surface proteoglycan, is a key component of the glycocalyx and can be measured using techniques like the QTRAP 5500 mass spectrometer.
Sodium pyruvate and TRIzol reagent are also useful tools in glycocalyx studies, as they can be employed in various biochemical analyses and RNA extraction procedures, respectively.
By leveraging these specialized techniques and tools, researchers can gain deeper understanding of the glycocalyx and its role in health and disease.
PubCompare.ai's AI-driven research optimization tools can help locate the best protocols from literature, preprints, and patents, unlocking valuable insights and streamlining your glycocalyx research effortlessly.
Explore PubCompare.ai today and take your glycocalyx analysis to new hieghts.