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Hep G2 Cells

Hep G2 cells are a widely used human hepatocellular carcinoma cell line derived from the liver tissue of a 15-year-old Caucasian male.
These cells exhibit many characteristics of normal human hepotocytes, making them a popular model for studying liver biology, metabolism, and toxicology.
Hep G2 cells are known for their ability to produce a variety of serum proteins and enzymes, and are often utilized in research on viral hepatitis, drug metabolism, and the development of novel therapeutics.
PubCompare.ai's AI-driven platform can help researchers optimize Hep G2 cell protocols for enhanced reproducibility and accuracy, with access to a robust database of literature, preprints, and patents to identify the best protocols and products for your Hep G2 cell research needs.

Most cited protocols related to «Hep G2 Cells»

Prediction of cytotoxicity is important to screen compounds that can cause undesired and desired cell damage, the latter as in the case of the tumour cells (1 ). The ProTox-II cytotoxicity model is based on data extracted from the Chemical European Biology Laboratory (ChEMBL) database (23 (link)). All compounds with an IC50 value of less than or equal to 10 μM in the in vitro toxicity assay against HepG2 cells are considered as positively cytotoxic. The ProTox-II cytotoxicity prediction model has a balanced accuracy of 85.00% on cross-validation and 83.60% on external validation. The AUC–ROC scores of cross-validation and external validation are 0.89 and 0.90 respectively. The kappa value is 0.69 for the model (Tables 1 and 2).
Publication 2018
Biological Assay Cells Cytotoxin Europeans Hep G2 Cells Laboratory Chemicals Neoplasms Oxidase, Protoporphyrinogen
(See Supplementary Protocol 1 for detailed Standard Operating Procedures for ENCODE-style eCLIP experiments, including oligonucleotide sequences, catalog numbers for all reagents, and specific details for eCLIP experiments). RNA binding protein (RBP)-RNA interactions were stabilized with UV crosslinking (254 nm, 400 mJ/cm2), followed by lysis in iCLIP lysis buffer, limited digestion with RNase I (Ambion), immunoprecipitation of RBP-RNA complexes with a specific primary antibody of interest using magnetic beads with pre-coupled secondary antibody (typically M-280 Sheep Anti-Rabbit IgG Dynabeads, ThermoFisher Scientific 11204D), and stringent washes. After dephosphorylation with FastAP (ThermoFisher) and T4 PNK (NEB), a barcoded RNA adapter was ligated to the 3′ end (T4 RNA Ligase, NEB) (at this step, multiple replicates of the same RBP, or potentially RBPs of similar size and bound RNA amount, can be uniquely barcoded and pooled after ligation to simplify downstream steps - see Supplementary Fig. 2a). Ligations were performed on-bead (to allow washing away unincorporated adapter) in high concentration of PEG8000, which improves ligation efficiency to > 90%. Samples were then run on standard protein gels and transferred to nitrocellulose membranes, and a region 75 kDa (~150 nt of RNA) above the protein size was isolated and proteinase K (NEB) treated to isolate RNA. RNA was reverse transcribed with AffinityScript (Agilent), and treated with ExoSAP-IT (Affymetrix) to remove excess oligonucleotides. A second DNA adapter (containing a random-mer of 5 (N5) or 10 (N10) random bases at the 5′ end) was then ligated to the cDNA fragment 3′ end (T4 RNA Ligase, NEB), performed with high concentration of PEG8000 (to improve ligation efficiency) and DMSO (to decrease inhibition of ligation due to secondary structure). After cleanup (Dynabeads MyOne Silane, ThermoFisher), an aliquot of each sample was first subjected to qPCR (to identify the proper number of PCR cycles), and then the remainder was PCR amplified (Q5, NEB) and size selected via agarose gel electrophoresis. Samples were sequenced on the Illumina HiSeq 2500 or 4000 platform as two Paired End 50bp (for N5) or 55bp (for N10) reads. All analyses were performed using identical antibody lots for RBFOX2 (A300-864A lot 002, Bethyl), SLBP (RN045P lot 001, MBL International), and IgG Isotype Control (02-6102 lot 32013, Thermo Fisher Scientific). SLBP experiments were performed with 20×106 cells and 10 ug of primary antibody; RBFOX2 experiments were performed with 20×106 cells and 10 ug (eCLIP Rep1 and Rep2) or 10×106 cells and 5 ug (RNase I variation experiments). All experiments in K562 and HepG2 cells were performed with 20×106 cells and 10 ug of indicated primary antibody (Supplementary Table 2). Antibody validation documentation (including Western images of immunoprecipitation and shRNA knockdown19 (link)) are available at http://www.encodeproject.org/. Additional experiments performed in K562 and HepG2 cells in which the antibody failed to successfully immunoprecipitate the targeted RBP were excluded from analysis. 293T cells were obtained from Clontech (Lenti-X 293T cell line). K562 and HepG2 cells were purchased from ATCC, and were not independently verified. Cells were routinely tested for mycoplasma using MycoAlert PLUS (Lonza).
Publication 2016
anti-IgG Buffers Cell Lines Cells Digestion DNA, Complementary Domestic Sheep Electrophoresis, Agar Gel Endopeptidase K Gels HEK293 Cells Hep G2 Cells Immunoglobulin Isotypes Immunoglobulins Immunoprecipitation Ligation M 280 Mycoplasma Nitrocellulose Oligonucleotides polyethylene glycol 8000 Proteins Psychological Inhibition Rabbits Ribonuclease, Pancreatic RNA-Binding Proteins RNA Ligase (ATP) Short Hairpin RNA Silanes Sulfoxide, Dimethyl Tissue, Membrane
There were two stages in the MILE prephase study: protocol training and proficiency testing. As part of the initial protocol training each participating laboratory was provided with identical equipment, including reagent kits, enzymes, spectrophotometer, and heat block instruments, and eight microarray experiments were performed at each centre with an on-site trainer in the respective laboratory being trained. The eight samples analysed during the training course were represented by MCF-7 (breast adenocarcinoma) and HepG2 (liver carcinoma) cell line total RNA (Ambion, Austin, TX, USA) with 1·0 μg and 5·0 μg input of total RNA, respectively, and four leukaemia patient sample lysates prepared from mononuclear cells obtained after Ficoll density purification. Patient lysates comprised cells of one chronic myeloid leukaemia (CML), one chronic lymphocytic leukaemia (CLL), and two replicate lysates of an AML patient sample (containing a translocation t(8;21), French-American-British (FAB) type M2). The total RNA from the patient lysates was extracted at each centre as part of the training programme, making these samples a test of the entire microarray process workflow post sample acquisition (RNeasy kit, Qiagen, Hilden, Germany). Subsequently, after the training phase and for operator proficiency testing, each laboratory independently performed four microarray experiments each for MCF-7 and HepG2 cell lines with inputs of 1·5 μg, 3·0 μg, 5·0 μg, and 8·0 μg total RNA. In total, 204 microarray profiles were included in the analysis (for details see Appendix SI and SII). The three anonymous replicate patient lysates were provided by the Laboratory for Leukaemia Diagnostics in Munich, Germany. All patients gave their informed consent for participation after having been advised of the purpose and investigational nature of the study. The study design adhered to the tenets of the Declaration of Helsinki and was approved by the ethics committees of the participating institutions before its initiation. Details on the microarray analysis workflow, image analysis, quality reports, as well as statistical methods are given in Appendix SI.
Publication 2008
Adenocarcinoma austin Breast Cell Lines Cells Chronic Lymphocytic Leukemia Diagnosis DNA Replication Enzymes Ficoll Hepatocellular Carcinomas Hep G2 Cells Institutional Ethics Committees Leukemia Leukemias, Chronic Granulocytic Microarray Analysis Patients Translocation, Chromosomal
After DNA extraction from HEK and HepG2 cells, bisulfite treatment was performed according to the standard protocol (8 (link),9 (link)). Briefly, DNA was denatured by 0.3 M NaOH treatment. Bisulfite solution was added for overnight treatment and the samples were heated at 55°C. After desalting, the treatment was completed by desulphonation and neutralization. Samples were ethanol precipitated and ready to use for PCR amplification.
Publication 2005
Ethanol Hep G2 Cells hydrogen sulfite
Human hepatoma HepG2 cell line was acquired from ATCC China. The cells were cultivated in RPMI 1640 at 37 °C with 5% CO2 in a moist environment. RPMI was used as per Nasr et al.25 (link), instead of the regular DMEM media. RPMI 1640 was enriched with 10% fetal bovine serum for cytotoxicity assays along with 2 mM L-glutamine, 50 UI/mL penicillin, and 50 UI/mL streptomycin31 (link),32 (link). After every 3 days, the medium was replaced. Cell cultures which have attained confluency were dislodged using trypsin, and the cells were planted into 96-well plates at a density of 106 cells/ml. Before being exposed to cubosomes, the cultures were retained at 37 °C for 24 h to allow the cells to achieve confluency and attach to the well plates. These cultured cells were utilized for cytotoxicity and impedance studies.
Human cervical cancer cells HeLa (obtained from ATCC, China), for the fluorescent studies, were obtained from ATCC and cultured in a combination of Eagle’s minimum essential medium (Sigma-Aldrich, China) with 10% fetal bovine serum in an incubator with humidified air or 5% CO2 at 37 °C. Every 3 days media was renewed, and when reaching 90% confluence cells were passed.
Publication 2020
Biological Assay Cell Culture Techniques Cells Cervical Cancer Cultured Cells Culture Media Cytotoxin Eagle Fetal Bovine Serum Glutamine HeLa Cells Hepatocellular Carcinomas Hep G2 Cells Homo sapiens Penicillins Trypsin

Most recents protocols related to «Hep G2 Cells»

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Example 101

Selected gRNAs were tested in a form of single-stranded gRNA with various chemical modifications (see Table 6 above). Transfection of the gRNAs was performed using Lipofectamine MessengerMax according to the manufacture protocol. The gRNAs activities at 12.5 nM are presented below in Table 7.

TABLE 7
gRNA activity in HepG2 and PHH transfected with Cas9
mRNA and gRNA
gRNAActivity, In-del %SDCell type
CH31-CTX043.9680555617.657448HepG2
CH31-CTX141.1226190520.441894HepG2
CH32-AltR13.8916666713.517525HepG2
CH31-CTX220.36944444 8.9200085PHH

These studies demonstrate that single stranded gRNAs transfected with Cas9 mRNA were active in both HepG2 cells and primary human hepatocytes.

Patent 2024
Cells Hepatocyte Hep G2 Cells Homo sapiens Lipofectamine RNA, Messenger Transfection

Example 1

In this example, the oligopeptide FTLE in chili pepper seeds was extracted as follows:

1) deseeding: fresh chili peppers were taken, and the flesh was separated from the seeds to obtain chili pepper seeds;

2) pulverizing: the chili pepper seeds were pulverized and sieved by an 80 mesh to obtain chili pepper seed powder ;

3) degreasing: the chili pepper seed powder was mixed with n-hexane at a ratio of 1:10 (g/ml); the mixture was stirred and degreased overnight; n-hexane was removed by suction filtration after the degreasing was completed to obtain a chili pepper seed meal;

4) protein extraction: the degreased chili pepper seed meal was dissolved in water at a ratio of 1:10 (w/v, g/mL); the pH value of the solution was adjusted to 9.5 with a NaOH solution to conduct dissolving for 4 h; then the pH value of the solution was adjusted to 4.5 with HCl to conduct precipitating for 2 h; the reaction solution was centrifuged at 8,000 rpm for 20 min, and the precipitate was collected as a crude protein extract;

5) ultra-high pressure assisted enzymolysis: the protein isolated was dissolved in water, and was subjected to an ultra-high pressure treatment at 300 MPa for 30 min; then the product obtained by the ultra-high pressure treatment was subjected to an enzymolysis treatment, in which the enzyme was Bacillus licheniformis, the mass ratio of the enzyme to the substrate was 1:20 (w/w, g/g), the temperature was 40° C., the pH value was adjusted to 8 with 1 mol/L NaOH, and the enzymolysis treatment was performed for 3 h;

6) enzyme inactivation: at the end of the enzymolysis, the enzyme was inactivated at 90° C. for 10 min to obtain a chili pepper seed zymolyte solution;

7) isolation and purification of zymolyte: the chili pepper seed zymolyte solution was passed through a DEAE anion chromatography column, where the mobile phase included deionized water and NaCl; the eluent in a periodfrom 35 min to 45 min was collected; then, isolation and purification were conducted by an ODS-A reverse phase C18 column (hydrophobic column), where the mobile phase included deionized water and 50% methanol, and the eluent in a periodfrom 75 min to 90 min was collected. The peptide fragments in the obtained eluate were subjected to mass spectrometry identification analysis, and information of multiple peptide sequences was obtained.

Example 2

Chemical systhesis was conducted in accordance with the peptide sequences obtained by mass spectrometry identification analysis of Example 1 to obtain synthetic peptides. The effect of each peptide on HepG2 cell proliferation was studied, and the specific steps were as follows:

1) HepG2 cell culture: hepG2 cells were obtained from the ATCC cell bank and were cultured in a DMEM medium containing 10% FBS at 37° C. in a 5% CO2 cell incubator. Cells were cultured in a 25 cm 2 flask, passaged when cells were grown to a density of 70% to 90%, and seeded in a 96-well plate.

2) Peptide fragment treatment: after 24 hours of cell culture in the 96-well plate, the original DMEM medium was aspirated from the wells. DMEM containing peptide fragments at concentrations of 0.1, 0.3, and 0.6 mM were added to each well to continue culturing for 24 hours.

3) Cell proliferation rate measured by MTT method: MTT at a concentration of 5 mg/mL was added to a 96-well plate in 20 μL per well. After incubation for 4 hours, the liquid was aspirated from each well. 150 μL DMSO was added to each well. The absorbance was measured after reacting for 20 min.

The results are shown in the figure. It can be seen that the oligopeptide FTLE has a better HepG2 cell inhibition rate than other oligopeptides, which is helpful for the prevention or treatment of liver cancer.

In the description of this specification, descriptions with reference to the terms “one embodiment”, “some embodiments”, “example”, “specific examples”, or “some examples”, etc. mean that a particular feature, structure, material, or characteristic described in connection with the embodiment or example is included in at least one embodiment or example of the present disclosure. In this description, schematic representations of the terms above do not necessarily refer to the same embodiment or example. Furthermore, the particular features, structures, materials, or characteristics described may be combined in any suitable manner in any one or more embodiments or examples. The different embodiments or examples and the features of the different embodiments or examples described in this description can be integrated and combined by a person skilled in the art without contradicting each other.

While embodiments of the present disclosure have been shown and described, it will be understood that the above-described embodiments are illustrative and not restrictive and that changes, modifications, substitutions, and variations may be made to the embodiments by those skilled in the art without departing from the scope of the present disclosure.

Patent 2024
2-diethylaminoethanol Anions Bacillus licheniformis Cancer of Liver Cell Culture Techniques Cell Proliferation Cells Chromatography Enzymes Filtration Hep G2 Cells Hexanes isolation Malignant Neoplasms Mass Spectrometry Methanol n-hexane Oligopeptides Peppers, Chile Peptide Fragments Peptides Powder Pressure Proteins Psychological Inhibition Sodium Chloride Staphylococcal Protein A Suction Drainage Sulfoxide, Dimethyl Temporal epilepsy, familial Vision

Example 40

HepG2 cells (ATCC) were maintained in DMEM, 10% (v/v) FBS (Sigma), and 1% (v/v) antibiotic-antimycotic in a standard tissue culture incubator (37° C., 5% C02). P. berghei (ANKA GFP-luc) infected A. stephensi mosquitoes were obtained from the New York University Langone Medical Center Insectary. For assays, ˜17,500 HepG2 cells per well were added to a 384-well microtitre plate in duplicate. After 18-24 h at 37° C. the media was exchanged and compounds were added. After 1 h, parasites obtained from freshly dissected mosquitoes were added to the plates (4,000 parasites per well), the plates were spun for 10 min at 1,000 r.p.m. and then incubated at 37° C. The final assay volume was 30 μl. After a 48-h incubation at 37° C., Bright-Glo (Promega) was added to the parasite plate to measure relative luminescence. The relative signal intensity of each plate was evaluated with an EnVision (PerkinElmer) system.

Patent 2024
Antibiotics Biological Assay Culicidae Hepatocyte Hep G2 Cells Luminescence Parasites Promega Tissues
HepG2 cells were cultured in Dulbecco's Modified Eagle's Medium (DMEM) supplemented with 10% fetal bovine serum (FBS), 100 U/ml penicillin, and 100 μg/ml streptomycin. The cells were grown at 37°C under a humidified 5% CO2 atmosphere. The CCK-8 method was used to determine cell viability (18 (link)). The HepG2 cells were seeded in 96-well plates at a density of 1.0 × 104 cells/well and incubated for 24 h. Then, the cells were exposed to 10–300 μg/ml of the EAF or PBS for 24 h, and the cell viability was measured by a CCK-8 kit.
For oxidative damage protection analysis, the blank group, the control group, and the EAF group were set after 24 h of adherent incubation. The EAF and control groups were treated with 10–300 μg/ml of EAF and serum-free DMEM for 24 h, followed by the exposure of H2O2 for another 4 h. The blank group was treated with serum-free DMEM for 28 h. Finally, the cell viability was measured by a CCK-8 kit.
Publication 2023
Atmosphere Cells Cell Survival Fetal Bovine Serum Hep G2 Cells Oxidative Damage Penicillins Peroxide, Hydrogen Serum Sincalide Streptomycin
Cell apoptosis was measured by AnnexinV FITC/PI staining and flow cytometry (14 (link)). HepG2 cells were cultured as described in Section 2.5.1. After digestion with trypsin containing EDTA (Solarbio, China), the cells were centrifuged at 1,000 g for 5 min at 4°C and washed two times with precooled PBS solution. Then, 1.0 × 106 cells were collected and centrifuged at 1,000 g for 5 min and allowed to react with 5.0 μl of Annexin V-FITC at 4°C for 15 min in darkness, followed by incubation with 10 μl of PI staining solution. After incubation at 4°C for 5 min, the early, viable, late, and apoptotic cells were collected, and the percentage ratio was analyzed with an Accuri C6 flow cytometry. The x and y coordinates refer to the fluorescence intensities of annexin V and PI, respectively.
Publication 2023
Annexin A5 Apoptosis Cells Darkness Digestion Edetic Acid FITC-annexin A5 Flow Cytometry Fluorescein-5-isothiocyanate Fluorescence Hep G2 Cells Trypsin

Top products related to «Hep G2 Cells»

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Fetal Bovine Serum (FBS) is a cell culture supplement derived from the blood of bovine fetuses. FBS provides a source of proteins, growth factors, and other components that support the growth and maintenance of various cell types in in vitro cell culture applications.
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DMEM (Dulbecco's Modified Eagle's Medium) is a cell culture medium formulated to support the growth and maintenance of a variety of cell types, including mammalian cells. It provides essential nutrients, amino acids, vitamins, and other components necessary for cell proliferation and survival in an in vitro environment.
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HepG2 cells are a well-established human hepatocellular carcinoma cell line derived from the liver tissue of a 15-year-old Caucasian male. They are commonly used in cell-based assays and research studies related to liver function, metabolism, and toxicology.
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Lipofectamine 2000 is a cationic lipid-based transfection reagent designed for efficient and reliable delivery of nucleic acids, such as plasmid DNA and small interfering RNA (siRNA), into a wide range of eukaryotic cell types. It facilitates the formation of complexes between the nucleic acid and the lipid components, which can then be introduced into cells to enable gene expression or gene silencing studies.
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Penicillin/streptomycin is a commonly used antibiotic solution for cell culture applications. It contains a combination of penicillin and streptomycin, which are broad-spectrum antibiotics that inhibit the growth of both Gram-positive and Gram-negative bacteria.
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Streptomycin is a broad-spectrum antibiotic used in laboratory settings. It functions as a protein synthesis inhibitor, targeting the 30S subunit of bacterial ribosomes, which plays a crucial role in the translation of genetic information into proteins. Streptomycin is commonly used in microbiological research and applications that require selective inhibition of bacterial growth.
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Penicillin is a type of antibiotic used in laboratory settings. It is a broad-spectrum antimicrobial agent effective against a variety of bacteria. Penicillin functions by disrupting the bacterial cell wall, leading to cell death.
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HepG2 is a human liver cell line derived from the liver tissue of a 15-year-old Caucasian male with a well-differentiated hepatocellular carcinoma. It is a widely used in vitro model for the study of liver cell biology and function.
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Lipofectamine 3000 is a transfection reagent used for the efficient delivery of nucleic acids, such as plasmid DNA, siRNA, and mRNA, into a variety of mammalian cell types. It facilitates the entry of these molecules into the cells, enabling their expression or silencing.
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TRIzol reagent is a monophasic solution of phenol, guanidine isothiocyanate, and other proprietary components designed for the isolation of total RNA, DNA, and proteins from a variety of biological samples. The reagent maintains the integrity of the RNA while disrupting cells and dissolving cell components.

More about "Hep G2 Cells"

Hep G2 cells, a widely used human hepatocellular carcinoma (HCC) cell line, have become a popular model for studying liver biology, metabolism, and toxicology.
Derived from the liver tissue of a 15-year-old Caucasian male, these cells exhibit many characteristics of normal human hepatocytes, making them a valuable tool for researchers.
One of the key features of Hep G2 cells is their ability to produce a variety of serum proteins and enzymes, which has made them a crucial component in research on viral hepatitis, drug metabolism, and the development of novel therapeutics.
Researchers can leverage PubCompare.ai's AI-driven platform to optimize Hep G2 cell protocols, ensuring enhanced reproducibility and accuracy in their experiments.
The platform provides access to a robust database of literature, preprints, and patents, allowing researchers to identify the best protocols and products for their Hep G2 cell research needs.
This includes information on related topics such as Fetal Bovine Serum (FBS), Dulbecco's Modified Eagle Medium (DMEM), Lipofectamine 2000 and 3000, Penicillin/Streptomycin, and TRIzol reagent.
By utilizing the insights and resources available through PubCompare.ai, researchers can streamline their Hep G2 cell experiments, leading to more reliable and impactful findings.
Whether you're studying liver biology, investigating drug metabolism, or developing novel therapeutics, the optimized Hep G2 cell protocols can help you achieve your research goals with greater efficiency and accuracy.