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ABCA1 protein, human

The ABCA1 protein is a member of the ATP-binding cassette (ABC) transporter superfamily.
It plays a crucial role in cellular lipid homeostasis, particularly in the regulation of cholesterol and phospholipid transport.
ABCA1 is primarily expressed in the liver, macrophages, and other tissues, where it mediates the efflux of cholesterol and phospholipids to lipid-poor apolipoproteins, such as apolipoprotein A-I, a key step in the initial stages of high-density lipoprotein (HDL) formation.
Dysfunctional or deficcient ABCA1 is associated with Tangier disease, a rare genetic disorder characterized by severely reduced HDL levels and the accumulation of cholesterol in tissues.
Understanding the biology and regulation of ABCA1 is an active area of cardiovascular research, with potential implications for the development of therapies targeting cholesterol metabolism and cardiovascular disease.

Most cited protocols related to «ABCA1 protein, human»

Cholesterol efflux capacity was quantified in blood samples from the cohort of healthy volunteers as described previously.17 (link) This assay quantifies total efflux mediated by pathways of known relevance in cholesterol efflux from macrophages (i.e., ATP-binding cassette transporter A1 [ABCA1] and G1 [ABCG1], scavenger receptor B1, and aqueous diffusion).17 (link) Each sample was run in triplicate, with a mean coefficient of variation of 4.3%. Values were normalized by dividing the efflux capacity of individual patients by the efflux capacity of a serum pool run with each assay.
Cholesterol efflux capacity in the coronary disease and pharmacologic-study cohorts was quantified with the use of a slightly modified method designed to increase throughput. J774 cells, derived from a murine macrophage cell line, were plated and radiolabeled with 2 μCi of 3H-cholesterol per milliliter. ABCA1 was up-regulated by means of a 6-hour incubation with 0.3 mM 8-(4-chlorophenylthio)-cyclic AMP. Subsequently, efflux mediums containing 2.8% apolipoprotein B–depleted serum were added for 4 hours. All steps were performed in the presence of the acyl–coenzyme A:cholesterol acyltransferase inhibitor CP113,818 (2 μg per milliliter). In a pilot study involving serum samples from 20 healthy volunteers, results from the original assay procedure17 (link) and the modified method were strongly correlated (r = 0.85).
Liquid scintillation counting was used to quantify the efflux of radioactive cholesterol from the cells. The quantity of radioactive cholesterol incorporated into cellular lipids was calculated by means of isopropanol extraction of control wells not exposed to patient serum. Percent efflux was calculated by the following formula: [(microcuries of 3H-cholesterol in mediums containing 2.8% apolipoprotein B–depleted serum – microcuries of 3H-cholesterol in serum-free mediums) ÷ microcuries of 3H-cholesterol in cells extracted before the efflux step] × 100. All assays were performed in duplicate. To correct for interassay variation across plates, a pooled serum control from five healthy volunteers was included on each plate, and values for serum samples from patients were normalized to this pooled value in subsequent analyses. Additional studies that were performed to validate the measurement of cholesterol efflux capacity are described in the Supplementary Appendix.
Publication 2011
ABCA1 protein, human ABCG1 protein, human Acyl Coenzyme A Apolipoproteins B Biological Assay BLOOD Cell Lines Cells Cholesterol Culture Media Cyclic AMP Diffusion Healthy Volunteers Heart Disease, Coronary Isopropyl Alcohol Lipids Macrophage Mus Patients Radioactivity Scavenger Receptor Serum Sterol O-Acyltransferase
A standard mixture was prepared by suspending in
200 mM ABC the proteins α-casein (bovine), β-casein (bovine),
enolase (yeast), apo-transferrin (human), carbonic
anhydrase (bovine), and ribonuclease B (bovine) to concentrations
of 6, 2, 4, 2.3, 2.5, and 2 μg/μL. Eight 400 μg
aliquots of this mixture were alkylated and digested as described
later (Table 1B).
Aliquots suspended
in the pH 8 reducing buffers specified in Table 1B were incubated at 50 °C with shaking for 60 min, after which
they were alkylated with 30 mM iodoacetamide (IAN) or 25 mM 4-VP,
shaking for 30 min at 37 °C.
All alkylated samples were
quenched by the addition of 200 mM DTT
to a final concentration of 22 mM and then diluted 1:1 with either
25 mM ABC or 0.1% DCA in 25 mM ABC (Table 1B). Modified, sequencing-grade trypsin (Promega) was added to each
sample (1:30 w/w). Digestion proceeded for 12 h on a 37 °C shaker.
Aliquots (10 μg) were removed for SDS-PAGE analysis.
Publication 2014
ABCA1 protein, human Bos taurus Buffers Caseins Digestion Enolase Homo sapiens Iodoacetamide Promega Proteins ribonuclease B SDS-PAGE Transferrin Trypsin Yeast, Dried
Blood collected from all the participants at baseline by means of venipuncture was placed into EDTA tubes, stored at 4°C for less than 4 hours, and centrifuged, and plasma was removed and stored at −70°C. Plasma lipids, including HDL cholesterol, were measured as described previously.11 (link) HDL particle concentration and size were measured by means of nuclear magnetic resonance spectroscopy (LipoScience).
Cholesterol efflux capacity was assessed by measuring the efflux of fluorescence-labeled cholesterol from J774 macrophages to apolipoprotein B–depleted plasma in study participants with the use of a previously described method.12 (link) This assay primarily evaluates cholesterol efflux as mediated by ATP-binding cassette transporter A1 (ABCA1). The fluorescence-labeled reagent, termed boron dipyrromethene difluoride (BODIPY) cholesterol, was used because it is more amenable to use in a large number of samples than radiolabeled cholesterol (details of the assay protocol are provided in the Supplementary Appendix). For comparison, we performed a parallel assessment of efflux capacity with the use of radiolabeled cholesterol in a limited number of plasma samples.9 (link)Cholesterol efflux capacity measured with the use of fluorescence-labeled cholesterol was moderately correlated with measurements performed with radiolabeled cholesterol (correlation coefficient for normalized cholesterol efflux, 0.54) (Fig. S1 in the Supplementary Appendix). The cholesterol efflux capacity did not change significantly when it was measured in samples obtained throughout a single day or 7 days apart (Fig. S2 in the Supplementary Appendix) or when samples underwent a freeze–thaw cycle (Fig. S3A and S3B in the Supplementary Appendix). However, as compared with 3-to-12-month storage at −70°C, parallel storage of plasma at −20°C reduced cholesterol efflux capacity measured with the use of either fluorescence-labeled cholesterol or radiolabeled cholesterol (Fig. S3C and S3D in the Supplementary Appendix). Measurements of cholesterol efflux capacity in this study were therefore performed with the use of the fluorescence-labeled cholesterol assay on plasma samples stored at −70°C.
Publication 2014
ABCA1 protein, human Apolipoproteins B Biological Assay BLOOD BODIPY boron difluoride Cholesterol dipyrromethene Edetic Acid Fluorescence Freezing High Density Lipoprotein Cholesterol Lipids Macrophage Plasma Spectroscopy, Nuclear Magnetic Resonance Venipuncture
A core set of key performance indicators are included in each STS survey (see Table 2 for assessments routinely included each month). Specific questions are added to the survey to address particular issues (e.g. to assess the impact of Smokefree legislation and public support for a levy on tobacco products to fund tobacco control initiatives). The postal follow-up questionnaire is much shorter. Questions include current smoking status, number of cigarettes smoked, attempts to stop and characteristics of those attempts, attitudes towards smoking, cutting down smoking behaviour and tobacco dependence.
Smoking status and cigarettes smoked per day are analysed in the current paper. Smoking status was assessed with the following question: 'Which of the following best applies to you? I smoke cigarettes (including hand-rolled) every day, I smoke cigarettes (including hand-rolled), but not every day; I do not smoke cigarettes at all, but I do smoke tobacco of some kind (e.g. pipe or cigar); I have stopped smoking completely in the last year; I stopped smoking completely more than a year ago; I have never been a smoker (i.e. smoked for a year or more); Don't Know'. Those who responded that they smoked cigarettes every day or that they smoked cigarettes but not every day are coded as current cigarette smokers. Cigarette consumption is measured using the following question 'How many cigarettes per day do/did you usually smoke'. Those who do not smoke every day can give a figure per week or per month.
Socio-demographic information includes: gender, age, and social grade based on information about the occupation of the chief income earner, as used in the British National Readership Survey [19 ]. The social grade categories are: AB = higher and intermediate professional/managerial, C1 = supervisory, clerical, junior managerial/administrative/professional, C2 = skilled manual workers, D = semi-skilled and unskilled manual workers, and E = on state benefit, unemployed, lowest grade workers. These are dichotomised into ABC1 and C2DE in the current analyses.
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Publication 2011
ABCA1 protein, human Clergy Nicotiana tabacum Smoke Supervision Tobacco Dependence Tobacco Products Workers
NFIX expression in brain sections was analyzed using a rabbit polyclonal anti-NFIX serum raised against amino acids 277–291 of human NFIX made by Geneka Biotechnology Inc (cat# 16021118, Montreal, Canada) and now available from Active Motif (cat# 39072, Carlsbad, CA, USA). Other antibodies used were as follows: Pax6 (Chemicon, rabbit), doublecortin (DCX, Santa Cruz sc-8606, goat) and phospho-histone H3 (pH3, Upstate, rabbit). Sections were washed with 1X phosphate buffered saline (PBS) and incubated for 2 hours with a blocking buffer containing 2% goat serum (v/v, S-1000, Vector Laboratories, Burlingame, CA) and 0.2% Triton X-100 (v/v; Sigma, St. Louis, MO) in 1X PBS. Anti-NFIX was used at 1/20,000 for embryonic tissues and 1/12,500 for postnatal tissues, anti-Pax6 was used at 1/25,000, anti-DCX was used at 1/500 and anti-pH3 was used at 1/2000. Sections were incubated overnight at room temperature then washed several times in PBS and incubated with a biotinylated secondary antibody (Vector Laboratories, Burlingame, CA) for 1 to 2 hours at room temperature, followed by processing with a VECTASTAIN ABC kit for 1 hour at room temperature (A used at 1/500, B used at 1/500, PK6100, Vector Laboratories). Sections were processed for color reaction using nickel- 3,3'-Diaminobenzidine (DAB, D5905, Sigma) solution (2.5% nickel sulfate and 0.02% DAB in 0.175 M sodium acetate) activated with 0.01% (v/v) hydrogen peroxide or the glucose-oxidase modification thereof [36 (link)], washed with 1X PBS multiple times, mounted on 3% gelatin-coated slides and coverslipped with DPX mounting medium (Electron Microscopy Sciences, PA). Immunofluorescent staining was performed using a Cy3-labeled goat anti-rabbit secondary antibody and DAPI (300 nM) staining of nuclei. Images were acquired on a PowerPhase digital camera (PhaseOne, Coppenhagen, Denmark), Zeiss AxioCam HRc (Zeiss, Germany) or a Zeiss LSM 510 Meta confocal microscope and were processed using Adobe Photoshop.
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Publication 2008
ABCA1 protein, human Amino Acids Antibodies Antibodies, Anti-Idiotypic Brain Cell Nucleus Cloning Vectors DAPI Electron Microscopy Embryo Fingers Fluorescent Antibody Technique Gelatins Goat Histone H3 Homo sapiens Immunoglobulins Microscopy, Confocal Nickel nickel sulfate Oxidase, Glucose Peroxide, Hydrogen Phosphates Rabbits Saline Solution Serum Sodium Acetate Tissues Triton X-100

Most recents protocols related to «ABCA1 protein, human»

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Example 9

CH25H was originally known to regulate cholesterol metabolism. However, when we compared the body weight, lipid deposition in liver and key enzymes involved in lipid metabolism, there was no significant change between WT and STAT1−/− mice (FIGS. 19A-19F). As shown in FIG. 19A, there was no significant difference of the body weight between APP/PS1 and APP/PS1/STAT1−/− mice. As shown in FIG. 19B, there was no significant difference in lipid deposition in liver cells between APP/PS1 and APP/PS1/STAT1−/− mice. Further, as shown in FIGS. 19C-19F, there were no significant difference of the expression of key enzymes including LPL, ABCA1, APOE, HMGCR between APP/PS1 and APP/PS1/STAT1−/− mice.

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Patent 2024
ABCA1 protein, human ApoE protein, human Body Weight Cholesterol Enzymes Figs Hepatocyte HMGCR protein, human Lipid Metabolism Lipids Liver Metabolism Mice, Laboratory STAT1 protein, human
Lysates were harvested with lysis buffer (0.1 M Tris–HCl, 0.01% SDS (pH 9)) containing protease inhibitor cocktail (BioShop, PIC002.1) followed by 20 minutes of boiling and vortexing at 95°C. Lysates were then pelleted by high-speed centrifugation for 20 minutes at 4°C, and supernatant was transferred into a new microcentrifuge tube for BCA assays to standardize protein loading across each experiment (Pierce, 23227).
Immunoblotting for VDAC1, ATP5A, ABCA1 was performed with 10% SDS-PAGE gels to separate proteins followed by transfer onto PVDF membrane (Immobilon, IPVH00010) at 110 V for 80 minutes or 8-hour 38 V transfer in the cold room. Samples to be probed for LC3 were separated on 15% SDS-PAGE gels instead. The transfer apparatus setup included an ice pack and a stir bar.
After Ponceau staining and imaging to assess overall protein loading, membranes were washed with TBST and blocked in 5% skim milk diluted in TBST for 30 minutes at room temperature. Incubation in primary antibodies diluted in 2.5% skim milk was performed overnight at 4°C. Three 5-minute TBST washes were performed prior to incubation of blots in secondary antibody diluted in 2.5% milk for 2 hours. Three final 10-minute TBST washes were followed by visualization of proteins with ECL (BioRad, 11705062). Densitometry analysis was performed using ImageLab 6.0 software (BioRad), and the protein of interest was normalized to either Ponceau staining or loading controls such as GAPDH or tubulin. Antibodies used in this study are compiled in Materials table (Table 1).
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Publication 2023
ABCA1 protein, human Antibodies Biological Assay Buffers Centrifugation Cold Temperature Densitometry GAPDH protein, human Gels Immobilon Immunoglobulins Milk, Cow's polyvinylidene fluoride Protease Inhibitors Proteins SDS-PAGE Tissue, Membrane Tromethamine Tubulin VDAC1 protein, human
Cells were washed with phosphate-buffered saline (PBS) and lysed in lysis buffer (50 mM Tris-Cl (pH 7.5), 150 mM NaCl, and 1% Triton X-100) containing 100 μg/mL 4-amidinophenylmethanesulfonyl fluoride, 2 μg/mL leupeptin, and 2 μg/mL aprotinin. Samples were electrophoresed on 10% sodium dodecyl sulfate-polyacrylamide gels and detected using anti-ABCA1 (1:5000 dilution), ABCG1 (1:1000 dilution), ABCG4 (1:1000 dilution), ABCG5 (1:3000 dilution), ABCG8 (1:1000 dilution), or vinculin (1:20,000 dilution) antibodies.
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Publication 2023
ABCA1 protein, human ABCG1 protein, human Antibodies Aprotinin Buffers Cells Fluorides leupeptin Phosphates polyacrylamide gels Saline Solution Sodium Chloride Sulfate, Sodium Dodecyl Technique, Dilution Triton X-100 Tromethamine VCL protein, human
Mouse anti-ABCA1, rabbit anti-ABCG4, and mouse anti-ABCG5 antibodies were prepared, as described previously [4 (link),8 (link),14 (link)]. Rabbit anti-ABCG1 (sc-20795), anti-ABCG8 (NB400-110), and mouse anti-vinculin (V9131) antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA), Novus Biologicals (Littleton, CO, USA), and Sigma-Aldrich (St. Louis, MO, USA), respectively. Other chemicals were purchased from Sigma-Aldrich, GE Healthcare (Little Chalfont, UK), Cayman Chemical (Ann Arbor, MI, USA), Wako Pure Chemical Industries (Osaka, Japan), and Nacalai Tesque (Kyoto, Japan).
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Publication 2023
ABCA1 protein, human ABCG1 protein, human Anti-Antibodies Antibodies Biological Factors Caimans Mice, House Novus Rabbits Vinculin
Purification of RNA, preparation of cDNA and RT-qPCR were carried out, as previously described, with transcript levels determined using the comparative Ct method [6 (link),11 (link),42 (link),45 (link)]. The sequences of the primers were: 5′-AGCCATTTTAAAGATAGCTTTCC-3′ and 5′-AAGCTCTGGTTCTTATTCACA-3′ for CD36; 5′-GTCCAATAGGTCCTCCGGGT-3′ and 5′-CCCACCGACCAGTCGAAC-3′ for SRA; 5′-GAGATTTCTCTGTATGGCACC-3′ and 5′-CTGCAAATGAGACACTTTCTC-3′ for LPL; 5′-AGTGGAAACAGTTAATGACCAG-3′ and 5′-GCAGCTGACATGTTTGTCTTC-3′ for ABCA1; 5′-GGTGGACGAAGAAAGGATACAAGACC-3′ and 5′-ATGCCCGTCTCCCTGTATCCA-3′ for ABCG1; 5′-CCTTCAGAACCCACAGAGATCC-3′ and 5′-ACGCTGCATAGCTCGTTCC-3′ for LXR-α; 5-GCTAACAGCGGCTCAAGAACT-3′ and 5′-GGAGCGTTTGTTGCACTGC-3′ for LXR-β; 5′-CAGGAGCCGACTGGCCAATC-3′ and 5′-ACCTTGGCCTGGCATCCTG-3′ for ApoE; and 5-CTTTTGCGTCGCCAGCCGAG-3′ and 5′-GCCCAATACGACCAAATCCGTTGACT-3′ for GAPDH.
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Publication 2023
ABCA1 protein, human ABCG1 protein, human Apolipoprotein E3 apolipoprotein E5 DNA, Complementary GAPDH protein, human Oligonucleotide Primers

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ABCA1 is a membrane protein that functions as a cholesterol efflux pump in the cellular lipid removal pathway. It facilitates the transfer of cellular cholesterol and phospholipids to lipid-poor apolipoproteins, such as apolipoprotein A-I, the major protein component of high-density lipoprotein (HDL) particles.
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ABCA1 is a membrane-bound protein that functions as an ATP-binding cassette transporter. It plays a role in the regulation of cellular cholesterol and phospholipid homeostasis.

More about "ABCA1 protein, human"

The ABCA1 protein, also known as the ATP-Binding Cassette Transporter A1, is a crucial player in cellular lipid homeostasis.
It belongs to the ATP-binding cassette (ABC) transporter superfamily and plays a pivotal role in regulating the efflux of cholesterol and phospholipids from cells to lipid-poor apolipoproteins, such as apolipoprotein A-I (ApoA-I).
This process is a key step in the initial stages of high-density lipoprotein (HDL) formation.
ABCA1 is primarily expressed in the liver, macrophages, and other tissues, where it mediates the transfer of cholesterol and phospholipids to ApoA-I, a critical step in reverse cholesterol transport.
Dysfunctional or deficient ABCA1 is associated with Tangier disease, a rare genetic disorder characterized by severely reduced HDL levels and the accumulation of cholesterol in tissues.
Understanding the biology and regulation of ABCA1 is an active area of cardiovascular research, with potential implications for the development of therapies targeting cholesterol metabolism and cardiovascular disease.
Researchers often utilize techniques such as TRIzol reagent for RNA extraction, Ab18180 and Ab52617 antibodies for ABCA1 detection, the RNeasy Mini Kit for RNA purification, Lipofectamine 2000 for cell transfection, and PVDF membranes for Western blotting.
Additionally, the High-Capacity cDNA Reverse Transcription Kit is commonly used for gene expression analysis.
By exploring the insights gained from these tools and techniques, scientists can unravel the complex mechanisms underlying ABCA1 function and its role in maintaining cellular lipid homeostasis.