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Actinomycin D1

Actinomycin D1 is a potent antitumor antibiotic produced by Streptomyces bacteria.
It functions as a DNA-binding agent, inhibiting RNA synthesis and cell division.
Actinomycin D1 has been utilized in the treatment of various cancers, including Wilms' tumor, testicular carcinoma, and Ewing's sarcoma.
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Most cited protocols related to «Actinomycin D1»

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Publication 2020
Actins Biotin Buffers Cells Chloroform Dactinomycin Dimethylformamide Edetic Acid Glycogen HEPES isolation Isopropyl Alcohol N-biotinylaminoethyl methanethiosulfonate Oligonucleotide Primers prisma RNA, Viral RNA Decay Sodium Chloride Streptavidin Transcription, Genetic trizol Tromethamine Tween 20

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Publication 2012
Cells Dactinomycin RNA, Messenger

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Publication 2010
CCND1 protein, human Dactinomycin DNA, Complementary GAPDH protein, human Genes Interleukin-1 beta Oligonucleotide Primers Proliferating Cell Nuclear Antigen PTGS2 protein, human RNA, Messenger Transcription, Genetic
Total RNA extracted from cancer cell lines and breast cancer and normal tissue samples were subjected to qRT-PCR and Western blot analysis. Cancer cell lines were transfected with scrambled-siRNA or METTL14-siRNA/ALKBH5-siRNA (Sigma-Aldrich) for 48 or 72 hours before they were subjected to qRT-PCR or Western blot analysis, as described previously (42 (link)). Primers used in this study are mentioned in table S1. Antibodies against ALKBH5 (#HPA 007196), β-actin (#A3854), GAPDH (#G9295), and METTL14 (#HPA038002) were purchased from Sigma-Aldrich. Antibodies against TGFβ1 (#ab155264), m6A (#ab151230), and YTHDF3 (#ab103328) were purchased from Abcam Inc. Antibodies against cyclin D1 (#2978), CDK4 (#12790), PARP (#5625S), SMAD3 (#9513), P27/KIP1 (#2552s), and pSMAD3 (#9520) were purchased from Cell Signaling Technology. The antibodies against cyclin E1 (#SC-4976), HuR (3A2) (#SC-5261), and pSMAD3 (#SC-11769) were purchased from Santa Cruz Biotechnology. The antibody against HMGA2 (GTX629478) was purchased from GeneTex. Actinomycin D (catalog no. A1410) was purchased from Sigma-Aldrich.
Publication 2018
Actins Antibodies CCNE1 protein, human CDKN1B protein, human Cell Lines Cyclin D1 Dactinomycin GAPDH protein, human HMGA2 protein, human Immunoglobulins Malignant Neoplasm of Breast Malignant Neoplasms METTL14 protein, human Oligonucleotide Primers RNA, Small Interfering SMAD3 protein, human TGF-beta1 Tissues Western Blot
HeLa cells (HeLa CCL-2) and HeLa-C cells (the gift of Volker Cordes, Max Planck Institute, Goettingen, Germany) were cultured in high-glucose DMEM (Cellgro, Manassas, VA) supplemented with 10% FBS as described previously (Griffis et al., 2002 (link)). Transient transfection was performed using either Fugene 6 (Roche Diagnostics, Indianapolis, IN) or Lipofectamine 2000 (Invitrogen, Carlsbad, CA). Unless otherwise indicated, transcriptions typically used 0.2–0.5 μg of DNA per well of a six-well plate. For transcriptional inhibition, cells were treated for 4 h with 5 μg/ml actinomycin D1 (Roche).
To enrich for mitotic cells, HeLa cells transfected with various GFP-fusions using Lipofectamine 2000 were synchronized by thymidine/nocodazole block (Zhu and Jiang, 2005 (link)). Twenty hours after transfection, cells were blocked in S phase with 2 mM thymidine for 16 h. After release into fresh medium for 6 h, cells were blocked in M phase with 20 ng/ml nocodazole for 12 h. Mitotic cells were collected by shake-off, pelleted and washed with PBS, suspended in fresh medium, and transferred to wells containing poly-l-lysine–coated glass coverslips. Coverslips were collected and fixed for immunofluorescence every 20 min up to 1 h after release.
For immunofluorescence assays, cells were plated on coverslips in six-well plates. Fourteen to eighteen hours after transfection, cells were washed with PBS, fixed 10 min at RT with 4% formaldehyde (methanol-free; Polysciences, Warrington, PA) in PBS, permeabilized with 0.2% Triton X-100, and processed as described previously (Griffis et al., 2002 (link)). The following antibodies were used in these experiments: anti-Nup98 (1:2000; Griffis et al., 2002 (link)), monoclonal 414 (1:1000; Calbiochem, La Jolla, CA), CREST serum (1:250; Antibodies Incorporated, Davis, CA), and chicken anti-mouse Gle2 (1:200). Antibodies were detected using Alexa Fluor–conjugated secondary antibodies with the exception of chicken anti-Gle2, which was detected using rhodamine-conjugated donkey anti-chicken (1:500). For staining with CenpA antibody (1:400, Cell Signaling Technology, Danvers, MA), cells were fixed for 10 min at −20°C with 100% methanol.
Epifluorescence images were captured using a BX-60 microscope (Olympus, Tokyo, Japan) equipped with an eight-bit camera (Dage-MTI, Michigan City, IN) and IP Lab software (Scanalytics, Fairfax, VA). When indicated, TIFF files were deconvolved using Simple PCI software (Compix, Cranberry Township, PA) and a nearest-neighbor algorithm. For simultaneous detection of CFP and YFP, or CFP and GFP fusion proteins, a Zeiss LSM510 Meta-equipped confocal microscope was used (Carl Zeiss, Thornwood, NY). To simultaneously image CFP and YFP, excitation of CFP was at 458 nm, with emission monitored at 463–495 nm. YFP was excited at 514 nm, and emission monitored at 516–570 nm. For simultaneous imaging of CFP and GFP, excitation was at 458 nm, emission was monitored at 463–612 nm, and Zeiss online fingerprinting software was used to separate CFP and GFP images. The images in Figure 6B were taken from a z-stack captured using a three-dimensional microscopy system (Intelligent Imaging Innovations, Denver, CO) based on a 200M microscope (Zeiss) equipped with a 12-bit Cool Snap HQ camera (Photometrics, Tucson, AZ) and Slidebook software (Intelligent Imaging Innovations). Deconvolution (nearest neighbors algorithm) and surface rendering were performed using Slidebook.
Publication 2010
actinomycin D1 Anti-Antibodies Antibodies Cells Chickens Cranberry Crista Ampullaris Diagnosis Division Phase, Cell Equus asinus Fluorescent Antibody Technique, Direct Formaldehyde FuGene Glucose HeLa Cells Immunofluorescence Immunoglobulins Innovativeness lipofectamine 2000 Lysine Methanol Microscopy Microscopy, Confocal Mus Nocodazole Nup98 protein, human Poly A Proteins Psychological Inhibition Rhodamine Serum Thymidine Transcription, Genetic Transfection Transients Tremor Triton X-100

Most recents protocols related to «Actinomycin D1»

The shPRMT6 plasmid and control plasmid were purchased from GeneChem (Shanghai, China). PRMT6 overexpression plasmid and empty vector were obtained from Tsingke (Beijing, China). shYTHDF2 and shCDK9 plasmids, along with their respective control plasmids, and YTHDF2 and CDK9 overexpression plasmids, were also sourced from Tsingke (Beijing, China). YTHDF2 promoter-driven luciferase reporter gene plasmid and Renilla luciferase control plasmid were acquired from OBiO Technology (Shanghai, China). EPZ020411 was purchased from Cayman (USA), CHIR-99,021 (Cat#HY-10,182 A) and Actinomycin D (Cat#HY-17,559) were from MCE (USA). The anti-PRMT6 (Cat#14,641) antibody was from CST (Boston, MA, USA). Antibodies against YTHDF2 (Cat#24744-1-AP), Cyclin D1 (Cat#60186-1-Ig), E-cadherin (Cat#20874-1-AP), and N-cadherin (Cat#22018-1-AP) were from Proteintech (Wuhan, China). Anti-β-catenin (Cat#PK02151), Vimentin (Cat#T55134) antibodies were from Abmart (Shanghai, China). Anti-p-β-catenin (Cat#sc-57,535), GSK-3β (Cat#sc-53,931) antibodies were from Santa Cruz Biotechnology (Dallas, TX, USA). Anti-APC (Cat#WL02422), c-Myc (Cat#WL01781) antibodies were from Wanleibio (Shenyang, China). Anti-Histone H3R2me2a antibodies were from Genetex (USA, Cat#GTX54134) and PTM BIO (Hangzhou, China, Cat#PTM668). Anti-CDK9 antibodies were from Abcam (UK, Cat#ab239364) and Santa Cruz Biotechnology (USA, Cat#sc-13130x).
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Publication 2024
Not available on PMC !
The shPRMT6 plasmid and control plasmid were purchased from GeneChem (Shanghai, China). PRMT6 overexpression plasmid and empty vector were obtained from Tsingke (Beijing, China). shYTHDF2 and shCDK9 plasmids, along with their respective control plasmids, and YTHDF2 and CDK9 overexpression plasmids, were also sourced from Tsingke (Beijing, China). YTHDF2 promoter-driven luciferase reporter gene plasmid and Renilla luciferase control plasmid were acquired from OBiO Technology (Shanghai, China). EPZ020411 was purchased from Cayman (USA), CHIR-99021 (Cat#HY-10182A) and Actinomycin D (Cat#HY-17559) were from MCE (USA). The anti-PRMT6 (Cat#14641) antibody was from CST (Boston, MA, USA). Antibodies against YTHDF2 (Cat#24744-1-AP), Cyclin D1 (Cat#60186-1-Ig), E-cadherin (Cat#20874-1-AP), and N-cadherin (Cat#22018-1-AP) were from Proteintech (Wuhan, China). Anti-βcatenin (Cat#PK02151), Vimentin (Cat#T55134) antibodies were from Abmart (Shanghai, China). Anti-pβ-catenin (Cat#sc-57535), GSK-3β (Cat#sc-53931) antibodies were from Santa Cruz Biotechnology (Dallas, TX, USA). Anti-APC (Cat#WL02422), c-Myc (Cat#WL01781) antibodies were from Wanleibio (Shenyang, China). Anti-Histone H3R2me2a antibodies were from Genetex (USA, Cat#GTX54134) and PTM BIO (Hangzhou, China, Cat#PTM668). Anti-CDK9 antibodies were from Abcam (UK, Cat#ab239364) and Santa Cruz Biotechnology (USA, Cat#sc-13130x).
Publication 2024
To detect the cyclin D1 mRNA stability, the ASMCs were treated with actinomycin (Act D, 2 µg/mL) treatment for 0, 3 and 6 h. The relative remaining RNA level was detected by qRT-PCR and the half-life of cyclin D1 mRNA was examined by transcript levels at indicated time points relative to those before Act D treatment.
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Publication 2023
Actinomycin CCND1 protein, human Dactinomycin RNA, Messenger
Mouse bone marrow cells were differentiated into macrophages in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% (v/v) low-endotoxin fetal bovine serum (FBS; Omega Scientific) and 20% (v/v) L929-conditioned medium for 5 days. For stimulation, cells were replated overnight at 1.0 × 105 cells per well in 96-well plates. For inflammasome stimulations, cells were primed with Pam3CSK4 (1 μg ml−1) for 5 h and then stimulated with 10 μg ml−1 nigericin in Opti-MEM I media (Thermo Fisher Scientific). For flagellin or LPS electroporation39 (link), 1.0 × 106 Pam3CSK4-primed BMDMs were electroporated with 1.0 μg LPS or 0.2 μg flagellin in 100 μl R buffer using a neon 100-μl tip with 1,720 voltage, 10 width, 2 pulse settings. Electroporated cells were added to 990 μl Opti-MEM I medium and cultured for 2 h. BMDMs treated with venetoclax (25 μM for 6 h), doxorubicin (10 μM for 6 h), TNF plus actinomycin D (20 ng ml−1 TNF, 500 ng ml−1 actinomycin D for 6 h), or TNF plus zVAD (100 ng ml−1 TNF, 20 μM zVAD for 16 h) were not primed. For lysis controls, cells were lysed with 0.25% Triton-X100 in medium. Where indicated, BMDMs were cultured with the indicated concentration of anti-NINJ1 clone 251 (link) (mouse IgG2a; Genentech), anti-NINJ1 clone D1 (mouse IgG2a; Genentech), anti-ninjurin clone 50 (BD Biosciences BD610777, raised against human NINJ1), or an isotype control mouse IgG2a (Thermo Fisher Scientific). Prior to addition to cells, anti-ninjurin clone 50 and isotype control mouse IgG2a antibodies were dialysed against PBS to remove sodium azide using Slide-A-Lyzer MINI Dialysis Device with a 10K MWCO (Thermo Fisher Scientific) according to the manufacturer’s instructions. Synthetic peptides used were mouse NINJ1 amino acids 26–37 (PPRWGLRNRPIN, Genentech) and its sequence-scrambled analogue (PWPPRRNRNGLI, Genentech). BMDMs were pre-treated with antibody or peptide for 10 min prior to addition of treatment.
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Publication 2023
actinomycin D1 Amino Acids Antibodies Bone Marrow Cells Buffers Cells Clone Cells Culture Media, Conditioned Dactinomycin Dialysis Doxorubicin Eagle Endotoxins Flagellin Homo sapiens IgG2A Immunoglobulin Isotypes Immunoglobulins Inflammasomes Macrophage Medical Devices Mus Neon Nigericin Peptides Pulse Rate Sodium Azide Triton X-100 venetoclax

Example 79

1. Hemophilia

A patient suffering from hemophilia A is diagnosed. A composition of exogenous FVIII expressing enucleated hematopoietic cells is prepared as described herein. 10{circumflex over ( )}9 of the cells are administered intravenously to the patient. The clotting rate is assessed with a standard in vitro clotting time assay known in the art. Circulating antibodies against FVIII are detected in serum as described herein. The levels of circulating antibodies are assessed to track the effectiveness of immune tolerance induction. If the clotting cascade activity is insufficient to ensure healthy coagulation, recombinant or isolated FVIII are administered concurrently intravenously in order to reduce the symptoms of hemophilia A.

2. Atypical Hemolytic Uremic Syndrome

A patient suffering from atypical hemolytic uremic syndrome (aHUS) is diagnosed. A composition of exogenous CFH expressing enucleated hematopoietic cells is prepared as described herein. 10{circumflex over ( )}9 of the cells are administered intravenously to the patient. The symptomatic hemolysis rate is assessed with a standard urinary hemolysis assay known in the art. Circulating antibodies against CFH are detected in serum as described herein. The levels of circulating antibodies are assessed to track the effectiveness of immune tolerance induction. The patient is administered the treatment until the symptoms of the disease are seen to ameliorate using the assays described herein.

3. Multiple Sclerosis

An individual with multiple sclerosis (MS) receives a single infusion of 1×10{circumflex over ( )}9 antigen expressing enucleated hematopoietic cells expressing the antigenic polypeptide myelin basic protein (MBP), produced and formulated as described herein. At the day of study drug administration, the patient is monitored in a phase 1 inpatient unit for 24 hours. Measurement of the primary outcome is performed at month 3 and additional safety follow-up is performed until month 6 with consecutive clinical, MRI, and general physical examinations as well as clinical and laboratory analyses to assess adverse events and monitor MS disease activity. The procedure is repeated until tolerance is induced such that the symptoms of MS are ameliorated in the individual. See, for example, Andreas Lutterotti et al. Sci Transl Med 5, 188ra75 (2013).

Frequency of different cell subsets is analyzed in whole blood (EDTA tubes) by flow cytometry with the following antibody panels: for immune cell subsets (granulocytes, eosinophils, monocytes, and B, T, NK, and NK T cells)—anti-CD45 (PE-Cy7, eBioscience), anti-CD16, (APC-Cy7, BioLegend), anti-CD19 [fluorescein isothiocyanate (FITC), BD], anti-CD14 (V450, BD), anti-CD3 [peridinin chlorophyll protein (PerCP), BD], and anti-CD56 [phycoerythrin (PE), eBioscience]; for T cell subsets including CD4+, FoxP3+ Tregs, regulatory CD8+CD57+ILT2+, and proinflammatory CD8+CD161high T cells-anti-CD3 (PE-Cy7, eBioscience), anti-CD4 (APC, eBioscience), anti-CD8 [Pacific Blue (PB), Dako-Biozol], anti-FoxP3 (PE, Miltenyi), anti-CD25 (APC, eBioscience), anti-CD57 (FITC, BD), anti-ILT2 (PE, Beckman), and anti-CD161 (APC, Miltenyi). The corresponding isotype controls are included in all stainings. Cells are analyzed with an LSR-II flow cytometer (BD) and FACSDiva Software (BD).

Peripheral blood mononuclear cells (PBMCs) are isolated by Ficoll density gradient centrifugation (PAA), and functional phenotype of T cells is evaluated by intracellular cytokine staining as follows: 5×10{circumflex over ( )}5 freshly isolated PBMCs are incubated overnight in 200 ml of X-VIVO 15 (Lonza) in a sterile FACS tube. The next day, cells are stimulated with phorbol 12-myristate 13-acetate (50 ng/ml, Sigma) and ionomycin (1 mg/ml, Sigma) in the presence of brefeldin A (10 mg/ml, eBioscience) for 5 hours. After washing with phosphate-buffered saline, cells are stained with LiveDead kit (AmCyan, Invitrogen), fixed, permeabilized, and stained with different antibodies: anti-IL-17 (Alexa Fluor 647; eBioscience), anti-IL-4 (PE-Cy7, BioLegend), anti-IFN-g (FITC, BioLegend), anti-IL-10 (PE; BioLegend), anti-CD3 (PE, DakoCytomation), anti-CD4 (PB, DakoCytomation), and anti-CD8 (PB, BioLegend) or with the corresponding isotype controls.

The antigen-specific T cell responses toward the myelin peptide used in the study are measured in freshly isolated PBMCs before the tolerization procedure and after 3 months. Antigen-specific T cell responses are analyzed by proliferation assays with thymidine incorporation. Briefly, isolated PBMCs are seeded in 96-well plates at 1.5×10{circumflex over ( )}5 PBMCs per well in X-VIVO 15 medium (Lonza) with 1 mM of peptide. Forty-eight wells are seeded per antigen, and six wells only with medium as negative control in each plate. TTx (5 mg/ml) (Novartis Behring) is used as positive control. On day 7, plates are incubated for 15 hours with 1 mCi of [3H] thymidine (Hartmann Analytic). [3H] thymidine-pulsed plates are analyzed with a scintillation b counter (Wallac 1450, PerkinElmer). The scintillation counts (CPM) of each well are measured. Wells showing CPM higher than the mean+3 SDs of the unstimulated wells are considered as positive.

Many modifications and other embodiments of the inventions set forth herein will come to mind to one skilled in the art to which these inventions pertain having the benefit of the teachings presented in the foregoing descriptions and the associated drawings. Therefore, it is to be understood that the inventions are not to be limited to the specific embodiments disclosed and that modifications and other embodiments are intended to be included within the scope of the appended claims. Although specific terms are employed herein, they are used in a generic and descriptive sense only and not for purposes of limitation.

All publications and patent applications mentioned in the specification are indicative of the level of those skilled in the art to which this invention pertains. All publications and patent applications are herein incorporated by reference to the same extent as if each individual publication or patent application was specifically and individually indicated to be incorporated by reference.

Tables A-J

TABLE A
Circulating cells
Embryonic stem cells (ESC)Induced pluripotent stem cells
(iPSC)
Cord blood stem cell (CD-SC)Mesenchymal stem cell
CD34+ cellsPolychromatic normoblasts
Hematopoietic stem cells (HSC)Orthochromatic normoblasts
Spleen colony forming unit (CFU-S)Proerythroblast
Common myeloid progenitor (CMP)Polychromatophilic erythrocyte
cells capable of forming a granulocyte,
erythrocyte, monocyte, or
megakaryocyte (CFU-GEMM)
Blastocyte colony-forming cellsNormoblast
Burst-forming unit erythroid (BFU-E)Platelets
Megakaryocyte-erythroid progenitorLeukocytes
(MEP) cell
Colony-forming unit erythroid (CFU-E)Lymphoid cells
ReticulocytesT cells
ErythrocytesB cells

TABLE A1
Erythroid cells
Embryonic stem cells (ESC)Induced pluripotent stem cells
(iPSC)
Cord blood stem cell (CD-SC)Polychromatic normoblasts
CD34+ cellsOrthochromatic normoblasts
Hematopoietic stem cells (HSC)Proerythroblast
Spleen colony forming unit (CFU-S)Polychromatophilic erythrocyte
Common myeloid progenitor (CMP)Normoblast
cells capable of forming a granulocyte,
erythrocyte, monocyte, or
megakaryocyte (CFU-GEMM)
Blastocyte colony-forming cells
Burst-forming unit erythroid (BFU-E)
Megakaryocyte-erythroid progenitor
(MEP) cell
Erythroid forming colony unit (CFU-E)
Reticulocytes
Erythrocytes

TABLE B
Circulating cell associated proteins
CD1
CD2
CD3
CD4
CD5
CD6
CD7
CD8
CD9
CD10
CD11a
CD11b
CD11c
CD12w
CD13
CD14
CD15
CD16
CD17
CD18
CD19
CD20
CD21
CD22
CD23
CD24
CD25
CD26
CD27
CD28
CD29
CD30
CD31
CD32
CD33
CD34
CD35
CD36
CD37
CD38
CD39
CD40
CD41
CD42
CD43
CD44
CD45
CD46
CD47
CD48
CD49a
CD49b
CD49c
CD49d
CD49e
CD49f
CD53
CD54
CD55
CD56
CD57
CD58
CD59
CD61
CD62E
CD62L
CD62P
CD63
CD68
CD69
CD71
CD72
CD73
CD74
CD80
CD81
CD82
CD83
CD86
CD87
CD88
CD89
CD90
CD91
CD95
CD96
CD100
CD103
CD105
CD106
CD107
CD107a
CD107b
CD109
CD117
CD120
CD122
CD127
CD132
CD133
CD134
CD135
CD138
CD141
CD142
CD143
CD144
CD147
CD151
CD152
CD154
CD156
CD158
CD163
CD165
CD166
CD168
CD184
CD186
CD195
CD197
CD199
CD209
CD202a
CD220
CD221
CD235a
CD271
CD279
CD303
CD304
CD309
CD326
TLR 1
TLR 2
TLR 4
TLR 5
TLR 6

TABLE C
Erythrocyte associated proteins
2′,3′-cyclic-Creatine kinaseHypothetical proteinRAP1A or RAP1B
nucleotide 3′-XP_100510
phosphodiesterase
AcetylcholinesteraseDC 38Hypothetical proteinRAP2B
XP_100619
Actin alpha andDuodenal cytochrome bHypothetical proteinRh blood D group
beta chainXP_100665antigen polypeptide
AdenosineEnhancer proteinHypothetical proteinRhesus D category VI
deaminaseXP_100925type III protein
Adducin alphaErythroblastHypothetical proteinSimilar to adhesive
subunitmembrane-associatedXP_103707plaque matrix protein
proteinprecursor
Aldolase AFar upstream elementHypothetical proteinSimilar to ankyrin 1
binding proteinXP_106269
Ankyrin 1 isoform 2Flotillin 1Ig heavy chain V-V regionSimilar to flotillin 2
Ankyrin 1 isoform 4Flotillin 2 47KellSimilar to glycophorin A
Ankyrin 1 spliceGlucose transporterKIAA0340Similar to Lutheran
form 2glycoproteinblood group
Aquaporin 1GlutathioneKIAA1741 proteinSimilar to RAS-related
transferaseprotein RAB-15
Arginase type 1Glyceraldehyde-3-Lyn B proteinSimilar to RAS-related
phosphateprotein RAL-A
dehydrogenase
Arginase type 1Glycophorin AMembrane protein p55Similar to tropomyosin
erythroid variant
ATP-binding cassetteGlycophorin APhosphatidylinositol-4-Similar to tropomyosin
half-transporterprecursorphosphate 5 kinase type III4 18
ATP-binding cassetteGlycophorin C isoform 1PhosphoribosylSolute carrier family 2
subfamily C member 6pyrophosphate synthetase(facilitated glucose
transporter) member 1
bA421H8.2 (novelHemoglobin alphaPoly (A)-specificSolute carrier family
protein)ribonuclease29 (nucleoside
transporter) member 1
B-CAM proteinHemoglobin betaPresenilin-associatedSpectrin alpha chain
protein
Block ofHemoglobin deltaProtein band 3Spectrin beta chain
proliferation 1
C-1-tetrahydrofolateHemoglobin epsilonProtein band 4.1Translation initiation
synthasefactor 2C
Calcium transportingHemoglobin gammaProtein band 4.1Tropomodulin
ATPase 4(elliptocytosis 1, RH-linked)
CD55HGTD-PProtein band 4.2Tropomyosin 3
CD58Hypothetical proteinProtein band 4.9 (dematin)Tropomyosin isoform
XP_061743 or
XP_089854
CD59 antigenHypothetical proteinProtein band 7.2b,Tropomyosinalpha
XP_091430stomatinchain (smooth muscle)
26
Cell surfaceHypothetical proteinRAB 35Unknown protein
glycoprotein CD44XP_091724
Channel-like integralHypothetical proteinRabphilin-3 A-integratingVesicle-associated
membrane proteinXP_092517proteinmembrane protein 2
(synaptobrevin 2)
ComplementHypothetical proteinRal A binding proteinZona pellucida binding
receptor 1XP_095819protein
Adipocyte plasmaStomatinMyosin-9Histone H1.1
membrane-
associated protein
AmmoniumStomatin-like protein 2Protein 4.1Histone H2A type 1-
transporter Rh type AB/E
Aquaporin 1Thioredoxin-relatedSpectrin alpha chain,Histone H3.1
transmembraneerythrocyte
protein 4
Aquaporin 7TMCC2Spectrin beta chain,Histone H4
erythrocyte
ATP-binding cassetteTransferrin receptorTalin-1Lamin A/C
sub-family Bprotein 1
member 6,
mitochondrial
Band 3 anionTransmembrane andTalin-2Lamina-associated
transport proteincoiled-coil domainpolypeptide 2, isoform
family 2alpha
BasiginUrea transporter 1Tropomodulin-1Lamina-associated
polypeptide 2,
isoforms beta/gamma
CD44Zinc transporter 1Tropomyosin 1 (Alpha)Lamin-B receptor
isoform 4
CD4755 kDa erythrocyteTropomyosin 3Lamin-B1
membrane protein
EquilibrativeActin, alpha cardiacTropomyosin alpha-3 chainLamin-B2
nucleosidemuscle
transporter 1
ErythroidActin, cytoplasmicTubulin alpha-1 chainMatrin-3
membrane-
associated protein
Flotillin-1Actin-related protein 2Tubulin beta chainMultiple inositol
polyphosphate
phosphatase 1
Flotillin-2Actin-related proteinTubulin, alpha 1 (TestisN-acylneuraminate
2/3 complex subunitspecific)cytidylyltransferase
1B
Glucose transporter,Actin-related proteinTubulin, alpha 8Neutral alpha-
type 12/3 complex subunit 2glucosidase AB
Glycophorin-AActin-related protein 3Tubulin, beta 6Nuclear pore complex
protein Nup93
Glycophorin-BAlpha-actinin-4VinculinNuclear pore
membrane
glycoprotein 210
Glycophorin-CAlpha-adducin78 kDa glucose-regulatedNucleolin
protein
Immunoglobulin-likeAnkyrin-1Antigen KI-67Nucleoporin NUP188
domain-containinghomolog
receptor 1
Integrin alpha-XAnkyrin-3ATP-dependent RNANucleoprotein TPR
helicase DDX39A
Integrin beta-1Beta-actin-like protein 2CalnexinPrelamin-A/C
Kell blood groupBeta-adducinCalreticulinProtein disulfide-
glycoproteinisomerase
Large neutral aminoCapping protein (ActinDNA topoisomerase 1Protein disulfide-
acids transporterfilament) muscle Z-isomerase A4
small subunit 3line, beta
MembraneCortactinDNA-dependent proteinProtein disulfide-
transport protein XKkinase catalytic subunitisomerase A6
Membrane-DematinDolichyl-Protein ERGIC-53
associateddiphosphooligosaccharide-
progesteroneprotein glycosyltransferase
receptor component 248 kDa subunit
MonocarboxylateDynactin 2 (P50),Dolichyl-Ribophorin II
transporter 1isoform CRA _bdiphosphooligosaccharide-
protein glycosyltransferase
subunit 1
MultidrugErythrocyteEndoplasmic reticulumTransitional
resistance-membrane proteinresident protein 29endoplasmic reticulum
associated protein 4band 4.2ATPase
Neutral cholesterolFilamin-AEndoplasmic reticulumUDP-
ester hydrolase 1resident protein 44glucose:glycoprotein
glucosyltransferase 1
Plasma membraneGamma-adducinEndoplasminCD59
calcium-transporting
ATPase 1
Plasma membraneGelsolinER-Golgi SNARE of 24 kDa
calcium-transporting
ATPase 3
Plasma membraneKinesin-1 heavy chainFACT complex subunit
calcium-transportingSPT16
ATPase 4
Probable E3Microtubule-Glucosidase 2 subunit beta
ubiquitin-proteinassociated protein
ligase C12orf51RP/EB family member 1
Rh blood group,Myosin light chain 4Heme oxygenase 1
CcEe antigens
SLC43A3Myosin lightHemogen
polypeptide 6
Sodium/calciumMyosin, heavy chainHeterochromatin protein
exchanger SCL8A311, smooth muscle1-binding protein 3
Sodium/potassium-Myosin-10High mobility group
transporting ATPaseprotein B1
subunit alpha-1
Sodium/potassium-Myosin-14High mobility group
transporting ATPaseprotein B2
subunit beta-3

TABLE C1
Erythrocyte transmembrane proteins
Aquaporin 1
Cell surface glycoprotein CD44
Channel-like integral membrane protein
Complement receptor 1
Erythroblast membrane-associated protein
Glucose transporter glycoprotein
Glycophorin A
Glycophorin A precursor
Glycophorin C isoform 1
Kell
Membrane protein p55
Protein band 3
Rh blood D group antigen polypeptide
Rhesus D category VI type III protein
Similar to glycophorin A
Similar to Lutheran blood group
Solute carrier family 2 (facilitated glucose transporter) member 1
Solute carrier family 29 (nucleoside transporter) member 1

TABLE C2
Erythrocyte GPI-linked proteins
Acetylcholinesterase
CD55
CD58
CD59 antigen

TABLE C3
Erythrocyte intracellular proteins
2′,3′-cyclic-nucleotide 3′-phosphodiesterase
Actin alpha and beta chains
Adenosine deaminase
Adducin alpha subunit
Aldolase A
Ankyrin 1 isoform 2
Ankyrin 1 isoform 4
Ankyrin 1 splice form 2
Arginase type 1
Arginase type 1 erythroid variant
ATP-binding cassette half-transporter
ATP-binding cassette subfamily C member 6
bA421H8.2 (novel protein)
B-CAM protein
Block of proliferation 1
C-1-tetrahydrofolate synthase
Calcium transporting ATPase 4
Creatine kinase
DC 38
Duodenal cytochrome b
Enhancer protein
Far upstream element binding protein
Flotillin 1
Flotillin 2 47
Glutathione transferase
Glyceraldehyde-3-phosphate dehydrogenase
Hemoglobin alpha
Hemoglobin beta
Hemoglobin delta
Hemoglobin epsilon
Hemoglobin gamma
HGTD-P
Hypothetical protein XP_061743 or XP_089854
Hypothetical protein XP_091430
Hypothetical protein XP_091724
Hypothetical protein XP_092517
Hypothetical protein XP_095819
Hypothetical protein XP_100510
Hypothetical protein XP_100619
Hypothetical protein XP_100665
Hypothetical protein XP_100925
Hypothetical protein XP_103707
Hypothetical protein XP_106269
Ig heavy chain V-V region
KIAA0340
KIAA1741 protein
Lyn B protein
Phosphatidylinositol-4-phosphate 5 kinase type III
Phosphoribosyl pyrophosphate synthetase
Poly (A)-specific ribonuclease
Presenilin-associated protein
Protein band 4.1
Protein band 4.1 (elliptocytosis 1, RH-linked)
Protein band 4.2
Protein band 4.9 (dematin)
Protein band 7.2b, stomatin
RAB 35
Rabphilin-3 A-integrating protein
Ral A binding protein
RAP1A or RAP1B
RAP2B
Similar to adhesive plaque matrix protein precursor
Similar to ankyrin 1
Similar to flotillin 2
Similar to RAS-related protein RAB-15
Similar to RAS-related protein RAL-A
Similar to tropomyosin
Similar to tropomyosin 4
Spectrin alpha chain
Spectrin beta chain
Translation initiation factor 2C
Tropomodulin
Tropomyosin 3
Tropomyosin isoform
Tropomyosinalpha chain (smooth muscle) 26
Unknown protein
Vesicle-associated membrane protein 2 (synaptobrevin 2)
Zona pellucida binding protein

TABLE D
Conjugation methods
Zero-length x-linker
EDC
EDC plus sulfo NHS
CMC
DCC
DIC
Woodward's reagent K
N,N′-carbonyldiimidazole
Schiff base + reductive amination
Homobifunctional NHS esters
DSP
DTSSP
DSS
BS{circumflex over ( )}3
DST
Sulfo-DST
BSOCOES
Sulfo-BSOCOES
EGS
Sulfo-EGS
DSG
DSC
Homobifunctional Imidoesters
DMA
DMP
DMS
DTBP
Sulfhydryl reactive x-linkers
DPDPB
BMH
Difluorobenzene derivatives
DFDNB
DFDNPS
Photoreactive x-linker
BASED
Homobifunctional aldehydes
Formaldehyde
Glutaraldehyde
bis-epoxide
1,4-butanediol diglycidyl ether
Homobifunctional hydrazides
adipic acid dihydrazide
carbohydrazide
Bis-diazonium derivative
o-tolidine diazotized
Bis-diazotized benzidine
Amine-sulfhydryl x-linker
SPDP, LC-SPDP, sulfo-LC-SPDP
SMPT and sulfo-LC-SMPT
SMCC and sulfo-SMCC
MBS and sulfo-MBS
SIAB and sulfo-SIAB
SMPB and sulfo-SMPB
GMBS and sulfo-GMBS
SIAX and SIAXX
SIAC and SIACX
NPIA
Carbonyl-sulfydryl x-linker
MPBH
M2C2H
PDPH
amine-photoreactive x-linker
NHS-ASA, Sulfo-NHS-ASA
Sulfo-NHS-LC-ASA
SASD
HSAB and sulfo-HSAB
SANPAH and sulfo-SANPAH
ANB-NOS
SAND
SADP and sulfo-SADP
Sulfo-SAPB
SAED
Sulfo-SAMCA
p-Nitrophenyl diazopyruvate
PNP-DTP
sulfhydryl-photoreactive x-linker
ASIB
APDP
Benzophenone-4-iodoacetamide
Benzophenone-4-maleimide
Carbonyl-photoreactive x-linker
ABH
Carboxylate-photoreactive x-linker
ASBA
arginine-photoreactive x-linker
APG
Bioorthogonal reactions
Diels-alder reagent pairs
Hydrazine-aldehyde reagent pairs
Boronic acid salicylhydroxamate
Click chemistry
Staudinger ligation

TABLE D1
Enzymatic conjugation methods
Enzymatic reactions
SpyCatcher/SpyTag
Spy0128 derivatives
Transpeptidases
Isopeptidases
Sortase
DD-transpeptidase
Peptidyl transferase
G-glutamyl transpeptidase
D-glutamyl transpeptidase
Farnesyltransferase
Prenyltranferase
Dimethylallyltrans-transferase
Geranylgeranyl pyrophosphate synthase
Dehydrodolichol diphosphate synthase

TABLE E
Chemistry of reactive groups
Amine reactions
Isothyocyantes
Isocyanates
Acyl azides
NHS esters
Sulfonyl chlorides
Aldehydes and glyoxals
Epoxides and oxiranes
Carbonates
Arylating agents
Imidoesters
Carbodiimides
Anhydrides
Fuorphenyl esters
Hydroxymethyl phosphine derivatives
Guanidination of amines
Thiol reactions
Haloacetyl and alkl halide derivatives
Maleimides
Aziridines
Acryloyl derivatives
Arylating agents
Thil-disulfide exchange reagents
Vinylsulfone derivatives
Metal-thiol dative bonds
Carboxylate rections
Diazoalkanes and diazoacetyl compounds
Carbonyldiimidazole
Carbodiimides
Hydroxyl reactions
Epoxides and oxiranes
Carbonyldiimidazole
N,N′0disuccinimidyl carbonate
N-hydroxysuccinimidyl chloroformate
Oxidation with periodate
Enzymatic oxidation
Alkyl halogens
Isocyanates
Aldehyde and Ketone reactions
Hydrazine derivatives
Schiff base formation
Reductive amination
Mannich condensation
Active hydrogen reactions
Diazonium derivatives
Mannich condensation
Iodination reactions
Cycloaddition reactions
Diels-Alder reaction
Complex formation with boronic acid derivatives
Click chemistry: Cu-promoted Azide-
Alkyne [3 + 2] cycloaddition

TABLE F
Autoimmune diseases and antigens
DiseaseKnown antigen
Acute rheumatic fevercross reactive antibodies to cardiac muscle
alopecia areataTrychohyalin, keratin 16
ANCA-associated vasculitisNeutrophil cytoplasmic antigen, proteinase 3, myeloperodixase,
bacterial permiability increasing factor
autoimmune gastritisH, K adenosine triphosphatase
autoimmune hemolyticRh blood group antigens, I antigen
anemia
autoimmune hepatitisnuclear protein, liver-kidney microsome type 1, liver cytosol type 1
autoimmune myocarditiscardiac myosin
Autoimmune thyroiditisThyroid peroxidase, thyroglobulin, thyroid-stimulating hormone
receptor
Autoimmune uveitisRetinal arrestin (S-antigen)
dermatomyositisMi2 ATPase
diabetes (type 1)Pancreatic beta cell antigen
goodpasture's syndromeNoncollagenous domain of basement membrane collagen type IV
Graves' diseaseThyroid stimulating hormone receptor
Guillain-Barré syndromeNeurofascin-186, gliomedin, nodal adhesion molecueles
HypoglycemiaInsulin receptor
idiopathicPlatelet integrin GpIIb, GpIIIa
thrombocytopenic purpura
Insulin resistant diabetesInsulin receptor
Membranous nephritisPhospholipase A2
mixed essentialrheumatoid factor IgG complexes
cryoglobulinemia
multiple sclerosisMyelin basic protein, proteolipid protein, myelin oligodendrocyte
glycoprotein
myasthenia gravisAcetylcholine receptor
Myasthenia gravis - MUSCMuscarinic receptor
pemphigus/pemphigoidEpidermal cadherin
pernicious anemiaintrinsic factor (Gastric)
polymyositisnuclear and nucleolar antigen
primary biliary cirrhosisneutrophil nuclear antigen, mitochondrial multienzyme complex
psoriasisPSO p27
rheumatoid arthritisrheumatoid factor IgG complexes, synovial joint antigen, citrullinated
protein, carbamylated protein
scleroderma/systemicScl-86, nucleolar scleroderma antigen
sclerosis
Sjögren's syndromeSS-B, Lupus La protein
systemic lupusDNA, histones, ribosomes, snRNP, scRNP
erythematosus
vitiligoVIT-90, VIT-75, VIT-40
Wegener's granulomatosisneutrophil nuclear antigen
AntiphospholipidBeta-2 glycoprotein 1
syndrome (APS) &
catastrophic APS
Chemotherapy inducedNeuronal antigens
peripheral neuropathy
ThromboticADAMTS13
thrombocytopenic purpura
Atypical hemolytic uremicComplement factor H
syndrome

TABLE G
Inflammatory diseases and antigens
DiseaseAntigen
Crohn's diseaseFlagellin, microbial antigens
Ulcerative colitisNeutrophil cytoplasmic antigen, microbial
antigens
Celiac diseaseGluten
Inflammatory bowel diseaseMicrobial antigens

TABLE H
Allergic disease triggers
AllergyAntigen
Animalfel d 1, can f6
dander
Black2S albumin, vicilin-like (7S) protein
walnut
Brazil2S albumin, legumin-like (11S) seed storage protein
nut
Cashew7S vicilin-like protein, legumin-like 11S seed storage protein
nut
ChestnutChitinase 1b, lipid transfer protein Cas s8
DustDer p2
mites
EggOvomucoid, ovalbumin, ovotransferrin, lysozyme, alpha-livetin
English2S albumin, 7S vicilin-like protein, lipid transfer protein, legumin-like 11S seed storage
walnutprotein
FishParvalbumins
HazelnutBet v1 homologue, profilin, lipid transfer protein, 11s globulin-like protein, 7S vicilin-like
protein
InsectMelittin, phospholipase A2, hyaluronidase, acid phosphatase, protease, antigen 5, Api
venomm1-4, Bom p1, p4, Dol m1, 2, 5; Vesp c1, c5; Pol a1, a2, a5; Ves v1, v2, v5; Sol I 1-4
LatexHev b 1, 2, 3, 5, 6.01, 6.02, 8, 9, 11
MilkAlpha s1 casein, beta-lactoglobulin
Moldenzymes, toxins, cell wall components
PeanutAra h1, Ara h2, Ara h3, Ara h6
PollenAconitate hydratase, fructose bisphosphate aldolase, ATP synthase, luminal binding
protein, calmodulin, calreticulin, chaperonin, enolase, lipid transfer protein 1, lipid
transfer protein 2, profilins
Pollen,Phl p 1, 2, 4, 5, 6, 11, 12, 13
grass
Shellfisharginine kinase, tropomyosin, myosin light chain, sarcoplasmic calcium binding protein,
triose phosphate isomerase, aldolase, titin
SoyGly m1 soybean hydrophobic protein, gly m4, gly m5, gly m6, Gly m 2s albumin, lipid
transfer proteins, alpha-globulin,
TreeLipid transfer proteins, profilins, Bet v1-related family, legumins, vicilins, 2S albumins
nuts
Wheatgluten, prolamins, 2S albumins, lipid transer proteins, a-amylase/protease inhibitors,
puroindoline, alpha-globulin, alpha-gliadin, beta-gliadin, gamma-gliadin, fast-omega-
gliadin, slow-omega-gliadin

TABLE I
Therapeutic proteins to treat diseases
Brand NameCompanyIndication
AmeviveAstellas PharmaModerate to severe chronic plaque
psoriasis
BayGamBayerHepatitis A, measles, varicella, rubella,
immunoglobulin deficiency
CinnoVexCinnaGenMultiple Sclerosis
SynagisMedlummneRespiratory syncytial virus (RSV) infections
LucentisRoche GenentechWet age-related macular degeneration
(AMD)
ActemraHoffman-La RocheRheumatoid Arthritis
AvastinRoche GenentechVarious cancers
BenefixPfizerHeamophelia B/Christmas disease
(coagulation factor IX defficiency)
BenlystaHGS, GlaxoSmithKlineSystemic lupus erythematosus (SLE)
BexxarGlaxoSmithKline, CorixaCD20+. follicular, NHL
CampathGenzymeB-cell chronic lymphocytic leukemia (B-CLL
CeredaseGenzymeType I Gaucher disease
CerezymeGenzymeType 1 Gaucher's disease
ErbituxLillyMetastatic colorectal cancer
Helixate FSCSL BehringHaemophilia A
HerceptinRoche GenentechBreast cancer
Kogenate FSBayer HealthcareHaemophilia A
LumizymeGenzymePompe disease (glycogen storage disease
type II)
NovoSevenNovo NordiskHemophilia A or B patients with inhibitors
to Factor VIII or Factor IX and in patients
with acquired hemophilia
PrivigenCSL BehringIVIG therapy
RecombinateBaxter, WyethHaemophilia A
RefactoPfizerHaemophilia A
RemicadeJannssen Biotech (J&J)Rheumatoid Arthritis, Crohn's Disease,
Ankylosing Spondylitis, Plaque Psoriasis,
Ulcerative Colitis
ReoProLillyPTCA (Angioplasty) adjunct
Rituxan/MabTheraRoche Genentech/BiogenBlood cancers and rheumatoid arthritis
Idec
SimulectNovartisOrgan rejection prophylaxis
SolirisAlexion PharmaceuticalsParoxysmal nocturnal hemoglobinuria
(PNH), atypical hemolytic uremic syndrome
(aHUS)
TysabriBiogen Idec, Elan Pharma.Multiple Sclerosis, Crohn's Disease
VectibixAmgenTreatment of epidermal growth factor
receptor (EGFR)-expressing, metastatic
colorectal carcinoma (mCRC)
XynthaWyethHaemophilia A (factor VIII defficiency)
ZenapaxRoche/PDLProphylaxis of acute organ rejection in
patients receiving renal transplants
ArcalystRegeneron PharmaceuticalsCryopyrin-Associated Periodic Syndromes
(CAPS), including FCAS and MWS
BetaseronBayer HealthcareMultiple Sclerosis, myocardial disease
CetrotideMerck SeronoInfertility
CimziaUCBRheumatoid Arthritis, Crohn's Disease
CopaxoneTeva PharmaceuticalsMultiple Sclerosis, Crohn's disease,
glaucoma, motor neurone disease,
Huntingtons chorea, neurodegenerative
disease
EnbrelAmgen, WyethRheumatoid Arthritis, psoriasis
EpogenAmgenAnemia
HumiraAbbottRheumatoid Arthritis, Crohn's Disease
KineretAmgen, BiovitrumActive Rheumatoid Arthritis
LantusSanofi-AventisDiabetes
PegasysRoche GenentechChronic hepatitis C, chronic hepatitis B
ProliaAmgen, GSKOsteoporosis, therapy-induced bone loss
(breast or ovarian cancer), bone
metastatase, giant cell tumor of bone,
multiple myeloma
RebifMerck Serono, PfizerMultiple Sclerosis (relapsing)
SimponiJohnson & JohnsonRheumatoid Arthritis, Crohn's Disease,
Ulcerative Cilitis, Ankylosing Spondylitis,
Psoriatic Arthritis
StelaraCentocor, Janssen-CilagModerate to severe plaque psoriasis who
are candidates for phototherapy or
systemic therapy.
VivaglobinCSL BehringPrimary Immune Defficiency (PID)
XgevaAmgenBone Metastasis from Solid Tumors
XolairRoche Genentech, NovartisModerate to severe persistent allergic
asthma
AvonexBiogen IdecMultiple Sclerosis (relapsing)
AranespAmgenAnemia
OrenciaBristol-Myers-SquibbRheumatoid arthritis, juvenile ideopathic
arthritis
ProcritJannssen Biotech (J&J)Anemia
ErwinazeJazzAcute lymphoblastic luekemia

TABLE J
Therapeutic protein classes to treat diseases
AAV capsid protein
alglucosidase alpha
Anti C5
Anti gp Iib/IIIa
Anti IGE
Anti IL-12, Anti IL-23
Anti RANK ligand
Anti-alpha 4 integrin
Anti-APRIL
Anti-BAFF
Anti-CD20
Anti-CD52
Anti-EGFR
Anti-Her2
Anti-IL2 receptor
Anti-IL6 receptor
Anti-PD1
Anti-RSV protein F
Anti-TNFa
Anti-VEGF
Asparaginase
CTLA4
Erythropoietin
Factor IX
Factor VII
Factor VIII
Glatiramer acetate
glucocerebrosidase
GnRH antagonist
IgG
IL1R antagonist
IL1R or IL1 antagonist
Insulin
Interferon alpha
interferon beta
Lentivirus capsid protein
LFA3-Fc
Retrovirus capsid protein
TACI-Ig
TNF-receptor
Tables 1-8

TABLE 1
Erythroid Polypeptides and Non-Exogenous antigen Polypeptides
ABO blood groupsStomatinPetersDAF Cromer
Aquaporin 3TropomyosinRasmussenGerbich (GYPC)
AubergersGlucose transporterReidCD47
Band 3AdducinREITGlycophorin A, B, C
BasiginRabphilinSARABand 3 (AE3)
C41C1 tetrahydrofolateRhesus blood D groupGYPB Ss
synthase
CD44Vel groupAldolaseC4A, C4B Chido, Rodgers
C4 component of
complement
Cis ABLan antigenTropomodulinHLA Bg HLA class I
Diego (Di)At antigenArginaseRHAG Rh-associated
Ammonium transport
Colton antigenJr antigenCreatine kinaseglycoprotein
Complement ComponentAnWj antigenB-Cam proteinColton (Co) Water
4channel protein
alpha(1,3)Sd antigenRap1AACHE Cartwright (Yt)
fucosyltransferaseAcetylcholinesterase
CR1BattyBennett-GoodspeedGlutathione transferase
DAFBilkesP antigen systemGlycophorin C
DiegoWright (Wr)Rh blood groupAquaporin
DuffyBoxXg antigen systemErythroblast associated
membrane protein
Hh/Bombay antigenChristiansenXK proteinCD44
ii antigenalpha(1,2)Yt/Cartwright antigenSynaptobrevin 2
fucosyltransferasesystem
Indian blood groupHJKCD58Ribonuclease
KellHOFMRhABO glycosyl transferases
KiddJFVAnWj Adhesion receptorCD59
Lewis antigenJONEsSciannaCD44
Lutheran antigenJensenRadinMER2
MNS antigen systemKatagiriDuodenal cytochrome BDOK Dombrock ADP-
ribosyltransferase
Cost groupLivesayDARC (Duffy)SEMA7A JMH Putative
adhesion receptor
Er groupMilneCR1 Knops-McCoyUMOD Sda Tamm-
Horsfall protein
(uromodulin)
DematinOldeideFP FamilyAnion exchanger
channel protein (band 3,
AE1)
Indian (In)Annexin FamilyTweety FamilyCTL Family
Kidd (Jk) UreaBcl-2 FamilyUT FamilyDAACS Family
transporter
FUT3 Lewis (Le)Bestrophin FamilyVIC FamilyDASS family
Adenosine deaminaseBNip3 FamilyAAAP FamilyDMT family
OK Oka Neurothelin,CD20 Familytransferrin receptorENT Family
putative adhesion
molecule
LW Adhesion receptorCLIC Familyc-KITGPH Family
FUT2 Secretor (Se)Connexin FamilyInsulin receptors 1 & 2GUP Family
FUT1 Hh alphaCRAC-C FamilyEstrogen receptorLCT Family
LU Lutheran (Lu)Ctr FamilyDexamethasone receptorMC family
Adhesion receptor
P1 GlycosyltransferaseE-CIC FamilyJAK2 kinaseMET Family
XK Kx PutativeENaC FamilyABC familyMFS Family
neurotransmitter
transporter
XG Xg formerly calledGIC FamilyArsAB familyMOP Family
PBDX
MIC2ICC FamilyF-ATPase FamilyMTC Family
HemoglobinInnexin FamilyIISP FamilyNCS2 Family
AnkyrinIRK-C FamilyMPT FamilyNramp Family
SpectrinLIC FamilyP-ATPase FamilyNSS Family
KEL Kell (K, k, Kp, Js)MIP FamilyAE familyOAT Family
Metalloproteinase
TorkildsenMIT familyAPC FamilyOST Family
Rab 35NSCC2 FamilyArsB FamilyOxa1 Family
Ral A binding proteinPCC FamilyBASS FamilyPiT Family
Zona pellucida bindingPlamolipin FamilyCaCA FamilyPNaS Family
protein
Lyn B proteinPLB FamilyCCC FamilyPOT Family
KIaa1741 proteinPLM FamilyCDF FamilyRFC Family
DC38Presenilin FamilyCIC FamilyRND Family*
Calciums transportingRIR-CaC FamilyCNT FamilySSS Family
ATPase
ACC FamilyTRIC FamilyCPA1 FamilySTRA6 Family
Amt FamilyTRP-CC FamilyCPA2 FamilySulP Family
ZIP FamilyHCC FamilyNIPA FamilyN-MDE Family
ATP-E FamilyLPI FamilyPPI FamilyEpo receptor
dsRNA-T FamilyMagT1 FamilyPPI2 FamilyMgtE Family

TABLE 2
Erythroid Promoters
PromoterGene
beta globin promoterbeta globin
3′ beta-globin enhancerbeta globin
beta globin locus control regionbeta globin
GATA-1 promoterGATA-1
GYPA promoterGlycophorin A
HK1 promoterHexokinase

TABLE 3
Sequences of Complement Receptor 1
4A. CR1 isoform S precursor, Homosapiens NCBI Reference Sequence No.
NP_000642.3
   1mgassprspe pvgppapglp fccggsllav vvllalpvaw gqcnapewlp farptnltde
  61fefpigtyln yecrpgysgr pfsiiclkns vwtgakdrcr rkscrnppdp vngmvhvikg
 121iqfgsqikys ctkgyrligs ssatciisgd tviwdnetpi cdripcglpp titngdfist
 181nrenfhygsv vtyrcnpgsg grkvfelvge psiyctsndd qvgiwsgpap qciipnkctp
 241pnvengilvs dnrslfslne vvefrcqpgf vmkgprrvkc qalnkwepel pscsrvcqpp
 301pdvlhaertq rdkdnfspgq evfyscepgy dlrgaasmrc tpqgdwspaa ptcevkscdd
 361fmgqllngrv lfpvnlqlga kvdfvcdegf qlkgssasyc vlagmeslwn ssvpvceqif
 421cpsppvipng rhtgkplevf pfgktvnytc dphpdrgtsf dligestirc tsdpqgngvw
 481sspaprcgil ghcqapdhfl faklktqtna sdfpigtslk yecrpeyygr pfsitcldnl
 541vwsspkdvck rkscktppdp vngmvhvitd iqvgsrinys cttghrligh ssaecilsgn
 601aahwstkppi cqripcglpp tiangdfist nrenfhygsv vtyrcnpgsg grkvfelvge
 661psiyctsndd qvgiwsgpap qciipnkctp pnvengilvs dnrslfslne vvefrcqpgf
 721vmkgprrvkc qalnkwepel pscsrvcqpp pdvlhaertq rdkdnfspgq evfyscepgy
 781dlrgaasmrc tpqgdwspaa ptcevkscdd fmgqllngrv lfpvnlqlga kvdfvcdegf
 841qlkgssasyc vlagmeslwn ssvpvceqif cpsppvipng rhtgkplevf pfgktvnytc
 901dphpdrgtsf dligestirc tsdpqgngvw sspaprcgil ghcqapdhfl faklktqtna
 961sdfpigtslk yecrpeyygr pfsitcldnl vwsspkdvck rkscktppdp vngmvhvitd
1021iqvgsrinys cttghrligh ssaecilsgn aahwstkppi cgripcglpp tiangdfist
1081nrenfhygsv vtyrcnpgsg grkvfelvge psiyctsndd qvgiwsgpap qciipnkctp
1141pnvengilvs dnrslfslne vvefrcqpgf vmkgprrvkc qalnkwepel pscsrvcqpp
1201pdvlhaertq rdkdnfspgq evfyscepgy dlrgaasmrc tpqgdwspaa ptcevkscdd
1261fmgqllngrv lfpvnlqlga kvdfvcdegf qlkgssasyc vlagmeslwn ssvpvceqif
1321cpsppvipng rhtgkplevf pfgkavnytc dphpdrgtsf dligestirc tsdpqgngvw
1381sspaprcgil ghcqapdhfl faklktqtna sdfpigtslk yecrpeyygr pfsitcldnl
1441vwsspkdvck rkscktppdp vngmvhvitd iqvgsrinys cttghrligh ssaecilsgn
1501tahwstkppi cqripcglpp tiangdfist nrenfhygsv vtyrcnlgsr grkvfelvge
1561psiyctsndd qvgiwsgpap qciipnkctp pnvengilvs dnrslfslne vvefrcqpgf
1621vmkgprrvkc qalnkwepel pscsrvcqpp peilhgehtp shqdnfspgq evfyscepgy
1681dlrgaaslhc tpqgdwspea prcavkscdd flgqlphgrv lfplnlqlga kvsfvcdegf
1741rlkgssvshc vlvgmrslwn nsvpvcehif cpnppailng rhtgtpsgdi pygkeisytc
1801dphpdrgmtf nligestirc tsdphgngvw sspaprcels vraghcktpe qfpfasptip
1861indfefpvgt slnyecrpgy fgkmfsiscl enlvwssved ncrrkscgpp pepfngmvhi
1921ntdtqfgstv nyscnegfrl igspsttclv sgnnvtwdkk apiceiisce ppptisngdf
1981ysnnrtsfhn gtvvtyqcht gpdgeqlfel vgersiycts kddqvgvwss ppprcistnk
2041ctapevenai rvpgnrsfft lteiirfrcq pgfvmvgsht vqcqtngrwg pklphcsrvc
2101qpppeilhge htlshqdnfs pgqevfysce psydlrgaas lhctpqgdws peaprctvks
2161cddflgqlph grvllplnlq lgakvsfvcd egfrlkgrsa shcvlagmka lwnssvpvce
2221qifcpnppai lngrhtgtpf gdipygkeis yacdthpdrg mtfnligess irctsdpqgn
2281gvwsspaprc elsvpaacph ppkiqnghyi gghvslylpg mtisyicdpg yllvgkgfif
2341ctdqgiwsql dhyckevncs fplfmngisk elemkkvyhy gdyvtlkced gytlegspws
2401qcqaddrwdp plakctsrth dalivgtlsg tiffilliif lswiilkhrk gnnahenpke
2461vaihlhsqgg ssvhprtlqt neensrvlp (Seq. ID No. 1)
4B. CR1 isoform F precursor, Homosapiens NCBI Reference Sequence No.
NP_000564.2
   1mgassprspe pvgppapglp fccggsllav vvllalpvaw gqcnapewlp farptnltde
  61fefpigtyln yecrpgysgr pfsiiclkns vwtgakdrcr rkscrnppdp vngmvhvikg
 121iqfgsqikys ctkgyrligs ssatciisgd tviwdnetpi cdripcglpp titngdfist
 181nrenfhygsv vtyrcnpgsg grkvfelvge psiyctsndd qvgiwsgpap qciipnkctp
 241pnvengilvs dnrslfslne vvefrcqpgf vmkgprrvkc qalnkwepel pscsrvcqpp
 301pdvlhaertq rdkdnfspgq evfyscepgy dlrgaasmrc tpqgdwspaa ptcevkscdd
 361fmgqllngrv lfpvnlqlga kvdfvcdegf qlkgssasyc vlagmeslwn ssvpvceqif
 421cpsppvipng rhtgkplevf pfgktvnytc dphpdrgtsf dligestirc tsdpqgngvw
 481sspaprcgil ghcqapdhfl faklktqtna sdfpigtslk yecrpeyygr pfsitcldnl
 541vwsspkdvck rkscktppdp vngmvhvitd iqvgsrinys cttghrligh ssaecilsgn
 601aahwstkppi cqripcglpp tiangdfist nrenfhygsv vtyrcnpgsg grkvfelvge
 661psiyctsndd qvgiwsgpap qciipnkctp pnvengilvs dnrslfslne vvefrcqpgf
 721vmkgprrvkc qalnkwepel pscsrvcqpp pdvlhaertq rdkdnfspgq evfyscepgy
 781dlrgaasmrc tpqgdwspaa ptcevkscdd fmgqllngrv lfpvnlqlga kvdfvcdegf
 841qlkgssasyc vlagmeslwn ssvpvceqif cpsppvipng rhtgkplevf pfgkavnytc
 901dphpdrgtsf dligestirc tsdpqgngvw sspaprcgil ghcqapdhfl faklktqtna
 961sdfpigtslk yecrpeyygr pfsitcldnl vwsspkdvck rkscktppdp vngmvhvitd
1021iqvgsrinys cttghrligh ssaecilsgn tahwstkppi cqripcglpp tiangdfist
1081nrenfhygsv vtyrcnlgsr grkvfelvge psiyctsndd qvgiwsgpap qciipnkctp
1141pnvengilvs dnrslfslne vvefrcqpgf vmkgprrvkc qalnkwepel pscsrvcqpp
1201peilhgehtp shqdnfspgq evfyscepgy dlrgaaslhc tpqgdwspea prcavkscdd
1261flgqlphgrv lfplnlqlga kvsfvcdegf rlkgssvshc vlvgmrslwn nsvpvcehif
1321cpnppailng rhtgtpsgdi pygkeisytc dphpdrgmtf nligestirc tsdphgngvw
1381sspaprcels vraghcktpe qfpfasptip indfefpvgt slnyecrpgy fgkmfsiscl
1441enlvwssved ncrrkscgpp pepfngmvhi ntdtqfgstv nyscnegfrl igspsttclv
1501sgnnvtwdkk apiceiisce ppptisngdf ysnnrtsfhn gtvvtyqcht gpdgeqlfel
1561vgersiycts kddqvgvwss ppprcistnk ctapevenai rvpgnrsfft lteiirfrcq
1621pgfvmvgsht vqcqtngrwg pklphcsrvc qpppeilhge htlshqdnfs pgqevfysce
1681psydlrgaas lhctpqgdws peaprctvks cddflgqlph grvllplnlq lgakvsfvcd
1741egfrlkgrsa shcvlagmka lwnssvpvce qifcpnppai lngrhtgtpf gdipygkeis
1801yacdthpdrg mtfnligess irctsdpqgn gvwsspaprc elsvpaacph ppkiqnghyi
1861gghvslylpg mtisyicdpg yllvgkgfif ctdqgiwsql dhyckevncs fplfmngisk
1921elemkkvyhy gdyvtlkced gytlegspws qcqaddrwdp plakctsrth dalivgtlsg
1981tiffilliif lswiilkhrk gnnahenpke vaihlhsqgg ssvhprtlqt neensrvlp
(Seq. ID No. 2)
4C. Predicted CRI isoform X1, Homosapiens, NCBI Reference Sequence No.
XP_005273121.1
   1mclgrmgass prspepvgpp apglpfccgg sllavvvlla lpvawgqcna pewlpfarpt
  61nltdefefpi gtylnyecrp gysgrpfsii clknsvwtga kdrcrrkscr nppdpvngmv
 121hvikgiqfgs qikysctkgy rligsssatc iisgdtviwd netpicdrip cglpptitng
 181dfistnrenf hygsvvtyrc npgsggrkvf elvgepsiyc tsnddqvgiw sgpapqciip
 241nkctppnven gilvsdnrsl fslnevvefr cqpgfvmkgp rrvkcqalnk wepelpscsr
 301vcqpppdvlh aertqrdkdn fspgqevfys cepgydlrga asmrctpqgd wspaaptcev
 361kscddfmgql lngrvlfpvn lqlgakvdfv cdegfqlkgs sasycvlagm eslwnssvpv
 421ceqifcpspp vipngrhtgk plevfpfgkt vnytcdphpd rgtsfdlige stirctsdpq
 481gngvwsspap rcgilghcqa pdhflfaklk tqtnasdfpi gtslkyecrp eyygrpfsit
 541cldnlvwssp kdvckrksck tppdpvngmv hvitdiqvgs rinyscttgh rlighssaec
 601ilsgnaahws tkppicqrip cglpptiang dfistnrenf hygsvvtyrc npgsggrkvf
 661elvgepsiyc tsnddqvgiw sgpapqciip nkctppnven gilvsdnrsl fslnevvefr
 721cqpgfvmkgp rrvkcqalnk wepelpscsr vcqpppdvlh aertqrdkdn fspgqevfys
 781cepgydlrga asmrctpqgd wspaaptcev kscddfmgql lngrvlfpvn lqlgakvdfv
 841cdegfqlkgs sasycvlagm eslwnssvpv ceqifcpspp vipngrhtgk plevfpfgkt
 901vnytcdphpd rgtsfdlige stirctsdpq gngvwsspap rcgilghcqa pdhflfaklk
 961tqtnasdfpi gtslkyecrp eyygrpfsit cldnlvwssp kdvckrksck tppdpvngmv
1021hvitdiqvgs rinyscttgh rlighssaec ilsgnaahws tkppicqlcq pppdvlhaer
1081tqrdkdnfsp gqevfyscep gydlrgaasm rctpqgdwsp aaptcevksc ddfmgqllng
1141rvlfpvnlql gakvdfvcde gfqlkgssas ycvlagmesl wnssvpvceq ifcpsppvip
1201ngrhtgkple vfpfgkavny tcdphpdrgt sfd1igesti rctsdpqgng vwsspaprcg
1261ilghcqapdh flfaklktqt nasdfpigts lkyecrpeyy grpfsitcld nlvwsspkdv
1321ckrkscktpp dpvngmvhvi tdiqvgsrin yscttghrli ghssaecils gntahwstkp
1381picqripcgl pptiangdfi stnrenfhyg svvtyrcnlg srgrkvfelv gepsiyctsn
1441ddqvgiwsgp apqciipnkc tppnvengil vsdnrslfsl nevvefrcqp gfvmkgprrv
1501kcqalnkwep elpscsrvcq pppeilhgeh tpshqdnfsp gqevfyscep gydlrgaasl
1561hctpqgdwsp eaprcavksc ddflgqlphg rvlfplnlql gakvsfvcde gfrlkgssvs
1621hcvlvgmrsl wnnsvpvceh ifcpnppail ngrhtgtpsg dipygkeisy tcdphpdrgm
1681tfnligesti rctsdphgng vwsspaprce lsvraghckt peqfpfaspt ipindfefpv
1741gtslnyecrp gyfgkmfsis clenlvwssv edncrrkscg pppepfngmv hintdtqfgs
1801tvnyscnegf rligspsttc lvsgnnvtwd kkapiceiis ceppptisng dfysnnrtsf
1861hngtvvtyqc htgpdgeqlf elvgersiyc tskddqvgvw ssppprcist nkctapeven
1921airvpgnrsf ftlteiirfr cqpgfvmvgs htvqcqtngr wgpklphcsr vcqpppeilh
1981gehtlshqdn fspgqevfys cepsydlrga aslhctpqgd wspeaprctv kscddflgql
2041phgrvllpln lqlgakvsfv cdegfrlkgr sashcvlagm kalwnssvpv ceqifcpnpp
2101ailngrhtgt pfgdipygke isyacdthpd rgmtfnlige ssirctsdpq gngvwsspap
2161rcelsvpaac phppkiqngh yigghvslyl pgmtisyicd pgyllvgkgf ifctdqgiws
2221qldhyckevn csfplfmngi skelemkkvy hygdyvtlkc edgytlegsp wsqcqaddrw
2281dpplakctsr thdalivgtl sgtiffilli iflswiilkh rkgnnahenp kevaihlhsq
2341ggssvhprtl qtneensrvl p (Seq. ID No. 3)

TABLE 4
Targets
General Classes of Targets
MicrobesPolypeptidesDNAAmino Acids
FungiToxinsRNAPrions
BacteriaLipidsParasitesCytokines
VirusCellsCellular debrisComplement-
associated molecules
Complement-Related Targets
Immune complexesC3dgC4aC6
Factor BC3dkC4bC7
Factor DC3eC2C8
ProperdinBbC4bpC9
C3membrane attackMannose-Binding Lectin (MBL)
complex
C3aC1qMBL-Associated Serine Protease 1 (MASP1)
C3bC1rMBL-Associated Serine Protease 2 (MASP2)
iC3bC1sC5
C3cC4C5a
Infectious Disease-Related Targets
LipopolysaccharidesCell invasion proteinIntermedilysinSecreted effector
protein sptP
Zona occludens toxinCholera enterotoxinInvasion protein sipASeeligeriolysin
Actin polymerization proteinCysteine proteaseIota toxin componentSerine protease
RickAIa
Actin polymerization proteinCytolethal distendingIvanolysinShiga toxin
RickAtoxin
Adenosine monophosphate-CytolysinLepBSphingomyelinase
protein transferase vopS
adenylate cyclaseCytotoxic necrotizingLethal factorStaphylokinase
factor
Adenylate cyclase ExoYCytotoxinLeukotoxinStreptokinase
ADP-ribosyltransferaseDermonecrotic toxinListeriolysinStreptolysin
enzymatic component
AerolysinDeubiquitinaseMicrobial collagenaseStreptopain
Alpha-toxinDiphtheria toxinOuter membraneSuilysin
protein IcsA
autotransporter
AlveolysinEnterohemolysinPanton-ValentineSuperantigen
Leucocidin F
AlveolysinEnterotoxinPerfringolysinT3SS secreted effector
EspF
Anthrolysin OEpidermal cellPertussis toxinTetanus toxin
differentiation
inhibitor
Arp2/3 complex-activatingExoenzymePhospholipaseTir
protein rickA
Binary ADP-ribosyltransferaseExotoxinPlasminogen activatorTolC
CDT toxin
Botulinum neurotoxinG-nucleotidePneumolysinToxic shock syndrome
exchange factortoxin
C2 toxin, component IIGuanine nucleotideProtective antigenZink-carboxypeptidase
exchange factor sopE
CagAHeat stableProtein kinaseZink-carboxypeptidase
enterotoxin
Calmodulin-sensitive adenylateIgA-specific serinePyolysinZn-dependent
cyclaseendopeptidasepeptidase
autotransporter
Cell cycle inhibiting factorInositol phosphateRTX toxin
phosphatase sopB
Other Molecular Targets
G-CSFIL3IL10MIP1a
GM-CSFIL4IL12MIP1b
M-CSFIL5IFNaTGFb
IL1aIL6IFNbTNFa
IL1bIL7IFNgTNFb
IL2IL8Self-antibodiesNon-self antibodies
PRPPRPcPRPscPRPres
Lipid & Cell Targets
Circulating tumor cellsvery low density lipidtriglyceridesFatty acids
(VLDL)
Metastaseshigh densitychylomicronsCholesterol
lipoprotein
Eukaryotic cellslow densityapolipoproteins
lipoprotein

TABLE 5
Diseases and Conditions
Cancers
AcuteColorectal cancerMacroglobulinemia,Pleuropulmonary
lymphoblasticWaldenströmBlastoma, Childhood
leukaemia (ALL)
Acute myeloidCraniopharyngioma, ChildhoodMale Breast CancerPregnancy and Breast
leukaemia (AML)Cancer
AdrenocorticalCutaneous T-Cell LymphomaMalignant FibrousPrimary Central
CarcinomaHistiocytoma of Bone andNervous System (CNS)
OsteosarcomaLymphoma
AIDS-Related KaposiDuctal Carcinoma In Situ (DCIS)MelanomaProstate Cancer
Sarcoma
AIDS-RelatedEmbryonal Tumors,Merkel Cell CarcinomaRare cancers
lymphomaChildhood
Anal CancerEndometrial CancerMesotheliomaRectal Cancer
Appendix CancerEpendymoma, ChildhoodMetastatic SquamousRenal cell carcinoma
Neck Cancer with Occult
Primary
Astrocytomas,Epithelial cancerMidline Tract CarcinomaRenal Pelvis and
ChildhoodInvolving NUT GeneUreter, Transitional
Cell Cancer
AtypicalEsophageal CancerMolar pregnancyRetinoblastoma
Teratoid/Rhabdoid
Tumor, Childhood
Basal CellEsthesioneuroblastoma,Mouth and oropharyngealRhabdomyosarcoma
CarcinomaChildhoodcancer
Bile duct cancerEwing sarcomaMultiple EndocrineSalivary Gland Cancer
Neoplasia Syndromes,
Childhood
Bladder cancerExtragonadal Germ Cell TumorMultipleSarcoma
Myeloma/Plasma Cell
Neoplasm
Bone cancerExtrahepatic Bile Duct CancerMycosis FungoidesSecondary cancers
Bowel cancerEye CancerMyelodysplasticSézary Syndrome
Syndromes
Brain Stem Glioma,Gallbladder CancerMyelodysplastic/Skin Cancer
ChildhoodMyeloproliferative
Neoplasms
Brain tumoursGastric cancerMyeloproliferativeSkin cancer (non
Disorders, Chronicmelanoma)
Breast cancerGastrointestinal Carcinoid TumorNasal Cavity andSmall Cell Lung Cancer
Paranasal Sinus Cancer
Bronchial Tumors,Germ Cell TumorNasopharyngeal cancerSmall Intestine Cancer
Childhood
Burkitt LymphomaGestational trophoblasticNeuroblastomaSoft Tissue Sarcoma
tumours (GTT)
Cancer of unknownGliomaNon-Hodgkin LymphomaSquamous Cell
primaryCarcinoma
Cancer spread toHairy cell leukaemiaNon-Small Cell LungSquamous Neck
boneCancerCancer with Occult
Primary, Metastatic
Cancer spread toHead and neck cancerOesophageal cancerStomach (Gastric)
brainCancer
Cancer spread toHeart Cancer, ChildhoodOral CancerStomach cancer
liver
Cancer spread toHepatocellular (Liver) CancerOral Cavity CancerT-Cell Lymphoma,
lungCutaneous - see
Mycosis Fungoides
and Sézary Syndrome
Carcinoid TumorHistiocytosis, Langerhans CellOropharyngeal CancerTesticular cancer
Carcinoma ofHodgkin LymphomaOsteosarcoma (BoneThroat Cancer
Unknown PrimaryCancer)
Cardiac (Heart)Hypopharyngeal CancerOsteosarcoma andThymoma and Thymic
Tumors, ChildhoodMalignant FibrousCarcinoma
Histiocytoma
Central NervousIntraocular MelanomaOvarian CancerThyroid Cancer
System Atypical
Teratoid/Rhabdoid
Tumor,
Childhood
Central NervousIslet Cell Tumors, PancreaticPancreatic CancerTransitional Cell
System EmbryonalNeuroendocrine TumorsCancer of the Renal
Tumors, ChildhoodPelvis and Ureter
Central NervousKidney cancerPancreaticUnknown primary
System, ChildhoodNeuroendocrine Tumorscancer
(Islet Cell Tumors)
Cervical cancerLangerhans Cell HistiocytosisPapillomatosis, ChildhoodUreter and Renal
Pelvis, Transitional
Cell Cancer
Chordoma,Laryngeal CancerParagangliomaUrethral Cancer
Childhood
ChoriocarcinomaLeukemiaParathyroid CancerUterine Cancer,
Endometrial
ChronicLip and Oral Cavity CancerPenile CancerUterine Sarcoma
Lymphocytic
Leukemia (CLL)
Chronic myeloidLiver cancerPharyngeal CancerVaginal cancer
leukaemia (CML)
ChronicLobular Carcinoma In Situ (LCIS)PheochromocytomaVulvar Cancer
Myeloproliferative
Disorders
Colon cancerLow Malignant Potential TumorPituitary TumorWaldenström
Macroglobulinemia
LymphomaLung CancerPlasma CellWilms Tumor
Neoplasm/Multiple
Myeloma
Complement and Immune Complex-Related Diseases
Age-relatedANCA-associated vasculitisGlomerulonephritis -MYH9-related disease
macular(Includes Pauci-immune)sparse hair - telangiectasis
degeneration
Atypical hemolyticAnti-glomerular basementGoodpasture's sndromeNail-patella syndrome
uremic syndromemembrane disease
(Goodpasture's)
AutoimmuneArthus ReactionGranulomatosis withNail-patella-like renal
hemolytic anemiapolyangiitis (ANCA anddisease
Wegeners)
C1 inhibitorAsthmaGuillain-Barre syndromeNephritis
deficiency
C1q deficiencyAtypical hemolytic uremicHemolytic angioedemaNon-amyloid
syndrome(HAE)monoclonal
immunoglobulin
deposition disease
C1r deficiencyAutoimmune inner ear diseaseHenoch-SchonleinPauci-immune
(AIED) Sensorineural hearing losspurpuraglomerulonephritis
C1s deficiencyAutoimmune uveitisHIVICKPediatric systemic
lupus erythematosus
C2 deficiencyAutosomal dominantHypersensitivty vasculitisPierson syndrome
intermediate Charcot-Marie-
Tooth disease type E
C3 deficiencyBehçet diseaseHypocomplementemicPolyarteritis
urticarial vasculitis
C4 deficiencyBerger (IgA) NephropathyIdiopathic membranouspolyarteritis nodosa
glomerulonephritis
C5 deficiencyBuergers diseaseIdiopathic nephroticPolymyalgia
syndromerheumatica
C6 deficiencyCentral nervous system vasculitisIgA nephropathy (Berger'sPolymyositis
disease)
C7 deficiencyChoroiditisIgAPolymyositis/
nephropathy/vasculitisdermatomyositis
(Henoch-Schonlein
purpura)
C8 deficiencyChronic demyelinatingImmunePoststaphilococcal
polyneuropathy (CIDP)thrombocytopeniaglomerulonephritis
C9 deficiencyChurg-strauss syndromeImmunobullous diseasesPoststeptococcal
glomerulonephritis
CD55 deficiencyCogan's syndromeImmunotactoid orPrimary
fibrillary glomerulopathymembranoproliferative
glomerulonephritis
CD59 deficiencyCollagen type III glomerulopathyInfection-relatedRapidly progressive
glomerulonephritisglomerulonephritis
(Crescentic)
Complement FactorCongenital and infantileInflammatory myopathiesRapidly progressive
I deficiencynephrotic syndromeglomerulonephritis
(RPGN)
Complement factor-Congenital membranousJuvenile dermatomyositisRasmussen syndrome
H related 1(CFHR1)nephropathy due to maternal
deficiencyanti-neutral endopeptidase
alloimmunization
Complement factor-Cryoglobulinaemia/ColdJuvenile polymyositisReactive arthritis
H related 3(CFHR3)agglutinin diease
deficiency
CR3/CR4Cryoglobulinemic vasculitisKawasaki diseaseRelapsing
defieciencypolychondritis
(leukocyte adhesion
deficiency 1)
Factor B deficiencyCutaneous vasculitisLipoproteinRenal amyloidosis
glomerulopathy
Factor D deficiencyDemyelinating myopathiesLupus nephritisReynolds syndrome
(paraprotein associated)
Factor H deficiencyDenys-Drash syndromeLupus nephropathyRheumatoid arthritis
Factor I deficiencyDermatomyositisMay Hegglin anomalySarcoidosis (Nesnier
Boeck Schuamann
Disease)
Ficolin 3 deficiencyDermatomyositisMembranoglomerularSchimke immuno-
nephritisosseous dysplasia
MASP2 deficiencyDiabetic nephropathyMembranoproliferativeScleroderma
glomerulonephritis
MBL deficiencyDrug-induced immune complexMembranoproliferativeSebastian syndrome
vasculitisglomerulonephritis Type I
(MPGN Type I)
Non-alcoholicEosinophilic granulomatosis withMembranoproliferativeSecondary
steatohepatitispolyangiitis (Churgg-Strauss)glomerulonephritis Type IIamyloidosis
(Dense Deposit Disease,
MPGN Type II)
ParoxysmalEpstein SyndromeMembranoproliferativeSevere or recurring
nocturnalglomerulonephritis TypeC diff colitis
hemoglobinuriaIII (MPGN Type III)
Properdin deficiencyEssential mixed cryoglobulinemiaMembranouseSjogren's syndrome
glomerulonephritis
Action myoclonus -Familial Mediterranean feverMenieres diseaseStaphylococcal or
renal failurestreptococcal sepsis
syndrome
Acute respiratoryFamilial renal amyloidosisMicroscopic polyangiitisStiff person syndrome
disease syndrome
(ARDS)/Severe
acute respiratory
syndrome (SARS)
Acute serumFamilial steroid-resistantMinimal change diseaseSystemic lupus
sicknessnephrotic syndrome witherythematosus
sensorineural deafness
Adult-onset StillFarmer's lungMixed connective tissueSystemic sclerosis
diseasedisease
Age-relatedFechtner SyndromeMostly large vesselTakayasu arteritis
macularvasculitis
degeneration
AL amyloidosisFibronectin glomerulopathymostly medium vesselToxic epidermal
vasculitisnecrolysis (Stevens
Johnson syndrome)
Alport's syndromeFibrosing alveolitisMostly small vesselTransplantation/
vsculitisreperfusion (solid
organ)
Alzheimer's diseaseFocal segmental glomerularMuckle-Wells syndromeVasculitis
Amyloidosis (AL,Focal segmentalMyasthenia gravisWegener's
AA, MIDD, Other)glomerulosclerosisgranulomatosis
Giant cell arteritisFrasier syndromeGalloway-Mowat syndrome
Type 1 diabetesMyasthenia gravisGraves' diseasePernicious anemia
Crohn's diseasealopecia areatathrombocytopenicPrimary biliary
purpuracirrhosis
Ulcerative colitisautoimmune hepatitisGuillain-Barre syndromePsoriasis
Inflammatoryautoimmune deramtomyositisAutoimmune myocarditisRheumatoid arthritis
bowel syndrome
Multiple sclerosisJuvenile idiopathic arthritisAutoimmune pemphigusVitiligo
Enzyme Deficiencies & Vascular Diseases
2,4-dienoyl-CoAFabry disease (1:80,000 toIsobutyryl-CoAPeripheral
reductase1:117,000)dehydrogenaseneuropathy
deficiency
2-Methyl-3-hydroxyFamilial hypercholesterolemiaIsovaleric acidemiaPeroxisomal disorders
butyric aciduria(1:500)(1:50,000; e.g.,
Zellweger syndrome,
neonatal
adrenoleukodystrophy,
Refsum's disease)
2-methylbutyryl-Familial myocardial infarct/strokeLactase deficiencyPhenylketonuria
CoA dehydrogenase(common)
3-hydroxy-3-Fatty acid oxidation disordersLesch-Nyhan syndromePrimary hyperoxaluria
methylglutaryl(1:10,000)
(HMG) aciduria
3-methylglutaconicGalactokinase deficiencyLipoprotein lipasePropionic acidemia
aciduriadeficiency (rare)
3-oxothiolaseGalactose epimeraselong-chain l-3-hdroxyacyl-Recurrent emesis
deficiencyCoA dehydrogenase
(1:100,000)
4-hydroxybutyricGalactosemiaLysinuric proteinShort-chain acyl-CoA
aciduriaintolerance (rare)dehydrogenase
5,10-methylenetetra-Galactosemia (1:40,000)Lysinuric proteinSucrase-isomaltase
hydrofolate reductaseintolerance (rare)deficiency (rare)
deficiency
(common)
5-OxoprolinuriaGaucher's diseaseMalonic acidemiaSymptoms of
(pyroglutamicpancreatitis
aciduria)
AbetalipoproteinemiaGlutaric acidemia type IMaple syrup urine diseaseTransferase deficient
(rare)galactosemia
(Galactosemia type 1)
Acute IntermittentGlutaric acidemia Type IIMedium chain acyl-CoATrifunctional protein
Porphyriadehydrogenasedeficiency
AlkaptonuriaGlutathione SynthetaseMedium/short chain L-3-Tyrosinemia type 1
Deficiency w/5-oxoprolinuriahydroxy acyl-CoA
dehydrogenase
ArgininemiaGlutathione SynthetaseMedum-chain ketoacyl-Tyrosinemia type 2
Deficiency w/o 5-oxoprolinuriacoA thiolase
argininosuccinateGlycogenolysis disordersMetachromaticTyrosinemia type 3
aciduria(1:20,000)leukodystrophy
(1:100,000)
BenignGlycogenosis, type I (1:70,000)MetachromaticUpward gaze paralysis
hyperphenylalaninemialeukodystrophy
(1:100,000)
beta ketothiolaseHemolytic anemia due toMethylmalonic acidemiaVery long chain acyl-
deficiencyadenylate kinase deficiency(Cbl C)CoA dehydrogenase
Biopterin cofactorHemolytic anemia due toMethylmalonic acidemiaWilson Disease
biosynthesis defectsdeficiency in Glucose 6(Cbl D)
phosphate dehydrogenase
Biopterin cofactorHemolytic anemia due toMethylmalonic acidemiaAicardi-Goutieres
regenerationdiphosphoglycerate mutase(vitamin b12 non-Syndrome (may be an
defectsdeficiencyresponsive)allelic form of CLE)
biotin-unresponsiveHemolytic anemia due toMethylmalonic acidemiaCutaneous lupus
3-methylcrotonyl-erythrocyte adenosinew/0 homocystinuriaerythematosus
CoA carboxylasedeaminase overproduction
deficiency
CarbamoylHemolytic anemia due toMethylmalonic aciduriaDermatitis
phosphateglucophosphate isomeraseand homocystinuriaherpetiformis
synthetasedeficiency
CarnitineHemolytic anemia due toMitochondrial disordershemophilia A
acylcarnitineglutathione reductase deficiency(1:30,000)
translocase
CarnitineHemolytic anemia due toMitochondrial disordershemophilia B
palmitoyltransferase Iglyceraldehyde-3-phosphate(1:30,000; e.g.,
dehydrogenase deficiencycytochrome-c oxidase
deficiency; MELAS
syndrome; Pearson's
syndrome [all rare])
CarnitineHemolytic anemia due toMitochondrial disordersIdiopathic steroid
palmitoyltransferase IIpyrimidine 5′ nucleotidase(1:30,000; e.g., Leighsensitive nephrotic
deficiencydisease, Kearns-Sayresyndrome (same as
syndrome [rare])focal segmental
glomerulaosclerosis)
Carnitine uptakeHemolytic anemia due to red cellMitochondrial disordersImmune
defectpyruvate kinase deficiency(1:30,000; e.g., lipoamidethrombocytopenic
dehydrogenase deficiencypurpura
[rare])
citrullinemia type IHHH syndrome (rare)Mitochondrial disordersMyasthenia gravis
(1:30,000; e.g., Pearson's
syndrome [rare])
Citrullinemia type IIhomocysteinuriaMultiple carboxylaseOligoarticular juvenile
(holocarboxylasearthritis
synthetase)
CongenitalHomocystinuria (1:200,000)Multiple carboxylaseScleroderma
disorders ofdeficiency (e.g.,
glycosylation (rare)holocarboxylase
synthetase [rare]) and
biotinidase deficiencies
(1:60,000)
D-2-hydroxyglutarichyperammonemia/ornithinemia/Muscle cramps/spasticitySolar urticaria (maybe
aciduriacitrullinemia (ornithineprotophyria
transporter defect)erythema)
D-2-hydroxyglutaricaciduriaHyperlipoproteinemia, types IMyoadenylate deaminaseThrombotic
(rare)and IV (rare)deficiency (1:100,000)thrombocytopenic
purpura
EnteropeptidaseHypermethioninemia due toNiemann-Pick disease,Tubulointerstitial
deficiency (rare)glycine N-methyltransferasetype C (rare)nephritis with Uveitis/
deficiencyATIN
EthylmalonicHypermethioninemiaNonketoticVon willebrand
encephalopathyencephalopathy due tohyperglycinemiadisease
adenosine kinase deficiency
Hyperprolinemia
Infectious Diseases & agents
AcinetobacterDengue haemorrhagic feverInfection-inducedSepsis
immune complex
vasculitis
Arcobacter butzleriDisseminated infection withKlebsiellaSerratia
infection - bloodmycobacterium avium complex -
infectionblood infection
ArcobacterE. coliLeprosy/Hansen's diseaseStaphylococcus
cryaerophilusAureus
infection - blood
infection
ArcobacterEnterobacterMalariaStenotrophomonas
infection - bloodmaltophilia - blood
infectioninfection
BacteremiaEnterococcusMeningococcusStreptococcal Group A
invasive disease -
blood infection
BacterialGlanders - blood infectionMethicillin ResistantStreptococcus
endocarditisStaphylococcus Aureuspneumoniae
CampylobacterGonorrheaPseudomonasStreptococcus
fetus infection -pyogenes
blood infection
CampylobacterHepatitisRhodococcus equi - bloodTrypanosomiasis
jejuni infection -infection
blood infection
CandidaHuman Immunodeficiency VirusSalmonellaYellow fever
Coagulase-negative Staphylococcus

TABLE 6
Exogenous antigens
General Classes of Exogenous antigens
Ankyrin repeat proteinsFibronectinsLyases
AntibodiesComplement receptorsGPI-linked polypeptidesNanobodies
AptamersCyclic peptidesHEAT repeat proteinsNucleic Acids
ARM repeat proteinsDARPinsHydrolasesPolypeptides
CarbohydratesDNAsesKinasesSingle-chain variable fragments
(scFv)
Cell surface receptorsEnzymesLipoproteinsTetratricopeptide repeat
proteins
Complement-Related Exogenous antigens
C1 inhibitorC4 binding proteinCR3Factor I
C3 Beta chain ReceptorCD59CR4Homologous restriction factor
C3aRCR1Decay-accelerating factorMembrane cofactor protein
(DAF)(MCP)
C3eRCR2Factor HPRELP
Enzymes
triacylglycerol lipasebile-acid-CoA hydrolaseferuloyl esterasephosphatidate phosphatase
(S)-methylmalonyl-CoAbis(2-ethylhexyl)phthalateformyl-CoA hydrolasephosphatidylglycerophosphatase
hydrolaseesterase
[acyl-carrier-protein]bisphosphoglyceratefructose-bisphosphatasephosphatidylinositol deacylase
phosphodiesterasephosphatase
[phosphorylase]Carboxylic-Ester Hydrolasesfumarylacetoacetasephosphodiesterase I
phosphatase
1,4-lactonasecarboxymethylenebutenolidasefusarinine-Cphosphoglycerate phosphatase
ornithinesterase
11-cis-retinyl-palmitatecellulose-polysulfatasegalactolipasephosphoglycolate phosphatase
hydrolase
1-alkyl-2-cephalosporin-C deacetylasegluconolactonasephosphoinositide phospholipase
acetylglycerophosphocholineC
esterase
2′-hydroxybiphenyl-2-cerebroside-sulfataseglucose-1-phosphatasephospholipase A1
sulfinate desulfinase
2-pyrone-4,6-dicarboxylatecetraxate benzylesteraseglucose-6-phosphatasephospholipase A2
lactonase
3′,5′-bisphosphatechlorogenate hydrolaseglutathione thiolesterasephospholipase C
nucleotidase
3-hydroxyisobutyryl-CoAchlorophyllaseglycerol-1-phosphatasephospholipase D
hydrolase
3′-nucleotidasecholinesteraseglycerol-2-phosphatasephosphonoacetaldehyde
hydrolase
3-oxoadipate enol-lactonasecholine-sulfataseglycerophosphocholinephosphonoacetate hydrolase
phosphodiesterase
3-phytasecholoyl-CoA hydrolaseGlycosidases, i.e. enzymesphosphonopyruvate hydrolase
that hydrolyse O- and S-
glycosyl compounds
4-hydroxybenzoyl-CoAchondro-4-sulfataseglycosulfatasephosphoprotein phosphatase
thioesterase
4-methyloxaloacetatechondro-6-sulfataseGlycosylasesPhosphoric-diester hydrolases
esterase
4-phytasecitrate-lyase deacetylasehistidinol-phosphatasePhosphoric-monoester
hydrolases
4-pyridoxolactonasecocaine esterasehormone-sensitive lipasePhosphoric-triester hydrolases
5′-nucleotidasecutinaseHydrolysing N-glycosylphosphoserine phosphatase
compounds
6-acetylglucose deacetylasecyclamate sulfohydrolaseHydrolysing S-glycosylpoly(3-hydroxybutyrate)
compoundsdepolymerase
6-phosphogluconolactonaseCysteine endopeptidaseshydroxyacylglutathionepoly(3-hydroxyoctanoate)
hydrolasedepolymerase
a-amino-acid esteraseCysteine-typehydroxybutyrate-dimerpolyneuridine-aldehyde esterase
carboxypeptidaseshydrolase
a-Amino-acyl-peptideD-arabinonolactonasehydroxymethylglutaryl-CoAprotein-glutamate
hydrolaseshydrolasemethylesterase
acetoacetyl-CoA hydrolasedeoxylimonate A-ring-iduronate-2-sulfatasequorum-quenching N-acyl-
lactonasehomoserine lactonase
acetoxybutynylbithiophenedGTPaseinositol-phosphateretinyl-palmitate esterase
deacetylasephosphatase
acetylajmaline esterasedihydrocoumarin hydrolasejuvenile-hormone esteraseSerine dehyrdatase or serine
hydroxymethyl transferase
acetylalkylglycerolDipeptidaseskynureninaseSerine endopeptidases
acetylhydrolase
acetylcholinesteraseDipeptide hydrolasesL-arabinonolactonaseserine-ethanolaminephosphate
phosphodiesterase
acetyl-CoA hydrolaseDipeptidyl-peptidases andlimonin-D-ring-lactonaseSerine-type carboxypeptidases
tripeptidyl-peptidases
acetylesteraseDiphosphoric-monoesterlipoprotein lipaseS-formylglutathione hydrolase
hydrolases
acetylpyruvate hydrolasedisulfoglucosamine-6-sulfataseL-rhamnono-1,4-lactonasesialate O-acetylesterase
acetylsalicylate deacetylasedodecanoyl-[acyl-carrier-lysophospholipasesinapine esterase
protein] hydrolase
acetylxylan esteraseEndodeoxyribonucleasesmannitol-1-phosphataseSite specific
producing 3′-endodeoxyribonucleases:
phosphomonoesterscleavage is not sequence specific
acid phosphataseEndodeoxyribonucleasesMetallocarboxypeptidasesSite-specific
producing 5′-endodeoxyribonucleases that
phosphomonoestersare specific for altered bases.
Acting on acid anhydrides toEndopeptidases of unknownMetalloendopeptidases.Site-specific
catalyse transmembranecatalytic mechanismendodeoxyribonucleases:
movement of substancescleavage is sequence specific
Acting on acid anhydrides toEndoribonucleases producingmethylphosphothioglyceratesphingomyelin
facilitate cellular and3′-phosphomonoestersphosphatasephosphodiesterase
subcellular movement
Acting on GTP to facilitateEndoribonucleases producingmethylumbelliferyl-acetateS-succinylglutathione hydrolase
cellular and subcellular5′-phosphomonoestersdeacetylase
movement
Acting on phosphorus-Endoribonucleases that aremonoterpene e-lactonesteroid-lactonase
nitrogen bondsactive with either ribo- orhydrolase
deoxyribonucleic acids and
produce 3′-
phosphomonoesters
Acting on sulfur-nitrogenEndoribonucleases that areN-acetylgalactosamine-4-sterol esterase
bondsactive with either ribo- orsulfatase
deoxyribonucleic acids and
produce 5′-
phosphomonoesters
actinomycin lactonaseEnzymes acting on acidN-acetylgalactosamine-6-steryl-sulfatase
anhydridessulfatase
acylcarnitine hydrolaseEnzymes Acting on carbon-N-succinyl-CoA hydrolase
carbon bondsacetylgalactosaminoglycan
deacetylase
acyl-CoA hydrolaseEnzymes acting on carbon-N-acetylglucosamine-6-sucrose-phosphate phosphatase
nitrogen bonds, other thansulfatase
peptide bonds
acylglycerol lipaseEnzymes acting on carbon-N-sulfoglucosaminesugar-phosphatase
phosphorus bondssulfohydrolase
acyloxyacyl hydrolaseEnzymes acting on carbon-oleoyl-[acyl-carrier-protein]Sulfuric-ester hydrolases
sulfur bondshydrolase
acylpyruvate hydrolaseEnzymes Acting on ether bondsOmega peptidasestannase
ADAMTS13Enzymes acting on halideorsellinate-depsideThioester hydrolases
bondshydrolase
Adenosine deaminaseEnzymes acting on peptideoxaloacetaseThioether and trialkylsulfonium
bonds (peptidases)hydrolases
adenylyl-[glutamate-Enzymes acting onpalmitoyl[protein] hydrolaseThreonine endopeptidases
ammonia ligase]phosphorus-nitrogen bonds
hydrolase
ADP-dependent medium-Enzymes acting on sulfur-palmitoyl-CoA hydrolasethymidine phosphorylase
chain-acyl-CoA hydrolasenitrogen bonds
ADP-dependent short-chain-Enzymes acting on sulfur-sulfurpectinesterasetrehalose-phosphatase
acyl-CoA hydrolasebonds
ADP-phosphoglycerateEther hydrolases.Peptidyl peptide hydrolasestriacetate-lactonase
phosphatase
alkaline phosphataseExodeoxyribonucleasesPeptidyl-amino-acidTriphosphoric-monoester
producing 5′-hydrolaseshydrolases
phosphomonoesters
all-trans-retinyl-palmitateExonucleases that are activePeptidylamino-acidtrithionate hydrolase
hydrolasewith either ribo- orhydrolases or acylamino-
deoxyribonucleic acids andacid hydrolases
produce 3′-
phosphomonoesters
aminoacyl-tRNA hydrolaseExonucleases that are activePeptidyl-dipeptidasestropinesterase
with either ribo- or
deoxyribonucleic acids and
produce 5′-
phosphomonoesters
AminopeptidasesExoribonucleases producing 3′-phenylacetyl-CoA hydrolaseubiquitin thiolesterase
phosphomonoesters
arylesteraseExoribonucleases producing 5′-Phenylalanine ammoniaUDP-sulfoquinovose synthase
phosphomonoesters.lyase
arylsulfataseFactor IXPhenylalanine hydroxylaseuricase
AsparaginaseFactor VIIIpheophorbidaseuronolactonase
Aspartic endopeptidasesfatty-acyl-ethyl-ester synthasephloretin hydrolasewax-ester hydrolase
b-diketone hydrolasephorbol-diester hydrolasexylono-1,4-lactonase

TABLE 7
Selected Diseases, Exogenous antigens and Targets
CategoryDiseaseExogenous antigenTarget
AmyloidosesAA Amyloidosisan an antibody-like binder to serumSerum amyloid A protein and
amyloid A protein or serum amyloid Pamyloid placques
component
Amyloidosesbeta2 microglobulin amyloidosisan an antibody-like binder to beta-2Beta2 microglobulin or amyloid
microglobulin or serum amyloid Pplacques
component
AmyloidosesLight chain amyloidosisan an antibody-like binder to light chain,Antibody light chain or amyloid
serum amyloid P componentplacques
Cell clearanceCanceran an antibody-like binder to CD44a circulating tumor cell
Cell clearanceCanceran an antibody-like binder to EpCama circulating tumor cell
Cell clearanceCanceran an antibody-like binder to Her2a circulating tumor cell
Cell clearanceCanceran an antibody-like binder to EGFRa circulating tumor cell
Cell clearanceCancer (B cell)an an antibody-like binder to CD20a cancerous B cell
Cell clearanceCancer (B cell)an an antibody-like binder to CD19a cancerous B cell
Clearance AbAntiphospholipid syndromebeta2-glycoprotein-1pathogenic self-antibody
against beta2-glycoprotein-1
Clearance AbCatastrophic antiphospholipidbeta2-glycoprotein-1pathogenic self-antibody
syndromeagainst beta2-glycoprotein-1
Clearance AbCold agglutinin diseaseI/i antigenPathogenic self-antibody
against I/i antigen
Clearance AbGoodpasture syndromea3 NC1 domain of collagen (IV)pathogenic self-antibody
against a3 NC1 domain of
Collagen (IV)
Clearance AbImmune thrombocytopeniaPlatelet Glycoproteins (Ib-IX, IIb-IIIa, IV, Ia-pathogenic self-antibody
purpuraIIa)against platelet glycoprotein
Clearance AbMembranous NephropathyPhospholipase A2 receptorpathogenic self-antibody
against phospholipase A2
receptor
Clearance AbWarm antibody hemolytic anemiaGlycophorin A, glycophorin B, and/orpathogenic self-antibody
glycophorin C, Rh antigenagainst glycophorins and/or Rh
antigen
ComplementAge-related macular degenerationa suitable complement regulatory proteinactive complement
ComplementAtypical hemolytic uremiccomplement factor H, or a suitableactive complement
syndromecomplement regulatory protein
ComplementAutoimmune hemolytic anemiaa suitable complement regulatory moleculeactive complement
ComplementComplement Factor I deficiencyComplement factor I, a suitableactive complement
complement regulatory protein
ComplementNon-alcoholic steatohepatitisa suitable complement regulatory moleculeactive complement
ComplementParoxysmal nocturnala suitable complement regulatory proteinactive complement
hemoglobinuria
Enzyme3-methylcrotonyl-CoA carboxylase3-methylcrotonyl-CoA carboxylase3-hydroxyvalerylcarnitine, 3-
deficiencymethylcrotonylglycine (3-MCG)
and 3-hydroxyisovaleric acid (3-
HIVA)
EnzymeAcute Intermittent PorphyriaPorphobilinogen deaminasePorphobilinogen
EnzymeAcute lymphoblastic leukemiaAsparaginaseAsparagine
EnzymeAcute lymphocytic leukemia,AsparaginaseAsparagine
acute myeloid leukemia
EnzymeAcute myeloblastic leukemiaAsparaginaseAsparagine
EnzymeAdenineadenine phosphoribosyltransferaseInsoluble purine 2,8-
phosphoribosyltransferasedihydroxyadenine
deficiency
EnzymeAdenosine deaminase deficiencyAdenosine deaminaseAdenosine
EnzymeAfibrinogenomiaFIenzyme replacement
EnzymeAlcohol poisoningAlcohol dehydrogenase/oxidaseEthanol
EnzymeAlexander's diseaseFVIIenzyme replacement
EnzymeAlkaptonuriahomogentisate oxidasehomogentisate
EnzymeArgininemiaAmmonia monooxygenaseammonia
Enzymeargininosuccinate aciduriaAmmonia monooxygenaseammonia
Enzymecitrullinemia type IAmmonia monooxygenaseammonia
EnzymeCitrullinemia type IIAmmonia monooxygenaseammonia
EnzymeComplete LCAT deficiency, Fish-Lecithin-cholesterol acyltransferase (LCAT)Cholesterol
eye disease, atherosclerosis,
hypercholesterolemia
EnzymeCyanide poisoningThiosulfate-cyanide sulfurtransferaseCyanide
EnzymeDiabetesHexokinase, glucokinaseGlucose
EnzymeFactor II DeficiencyFIIenzyme replacement
EnzymeFamilial hyperarginemiaArginaseArginine
EnzymeFibrin Stabilizing factor Def.FXIIIenzyme replacement
EnzymeGlutaric acidemia type Ilysine oxidase3-hydroxyglutaric and glutaric
acid (C5-DC), lysine
EnzymeGoutUricaseUric Acid
EnzymeGout - hyperuricemiaUricaseUric acid (Urate crystals)
EnzymeHageman Def.FXIIenzyme replacement
EnzymeHemolytic anemia due topyrimidine 5′ nucleotidasepyrimidines
pyrimidine 5′ nucleotidase
deficiency
EnzymeHemophilia AFactor VIIIThrombin (factor II a) or Factor
X
EnzymeHemophilia BFactor IXFactor XIa or Factor X
EnzymeHemophilia CFXIenzyme replacement
EnzymeHepatocellular carcinoma,Arginine deiminaseArginine
melanoma
EnzymeHomocystinuriaCystathionine B synthasehomocysteine
Enzymehyperammonemia/ornithinemia/Ammonia monooxygenaseAmmonia
citrullinemia (ornithine transporter
defect)
EnzymeIsovaleric acidemiaLeucine metabolizing enzymeleucine
EnzymeLead poisoningd-aminolevulinate dehydrogenaselead
EnzymeLesch-Nyhan syndromeUricaseUric acid
EnzymeMaple syrup urine diseaseLeucine metabolizing enzymeLeucine
EnzymeMethylmalonic acidemia (vitaminmethylmalonyl-CoA mutasemethylmalonate
b12 non-responsive)
EnzymeMitochondrialthymidine phosphorylasethymidine
neurogastrointestinal
encephalomyopathy
EnzymeMitochondrialThymidine phosphorylaseThymidine
neurogastrointestinal
encephalomyopathy (MNGIE)
EnzymeOwren's diseaseFVenzyme replacement
Enzymep53-null solid tumorSerine dehyrdatase or serineserine
hydroxymethyl transferase
EnzymePancreatic adenocarcinomaAsparaginaseasparagine
EnzymePhenylketonuriaPhenylalanine hydroxylase, phenylalaninePhenylalanine
ammonia lyase
EnzymePrimary hyperoxaluriaOxalate oxidaseOxalate
EnzymePropionic acidemiaPropionate conversion enzyme?Proprionyl coA
EnzymePurine nucleoside phosphorylasePurine nucleoside phosphorylaseInosine, dGTP
deficiency
EnzymeStuart-Power Def.FXenzyme replacement
EnzymeThrombotic ThrombocytopenicADAMTS13ultra-large von willebrand
Purpurafactor (ULVWF)
EnzymeTransferase deficientgalactose dehydrogenaseGalactose-1-phosphate
galactosemia (Galactosemia type
1)
EnzymeTyrosinemia type 1tyrosine phenol-lyasetyrosine
Enzymevon Willebrand diseasevWFenzyme replacement
IC clearanceIgA NephropathyComplement receptor 1Immune complexes
IC clearanceLupus nephritisComplement receptor 1immune complex
IC clearanceSystemic lupus erythematosusComplement receptor 1immune complex
InfectiousAnthrax (B. anthracis) infectionan an antibody-like binder to B. anthracisB. anthracis
surface protein
InfectiousC. botulinum infectionan an antibody-like binder to C. botulinumC. botulinum
surface protein
InfectiousC. difficile infectionan antibody-like binder to C. difficileC. difficile
surface protein
InfectiousCandida infectionan antibody-like binder to candida surfacecandida
protein
InfectiousE. coli infectionan antibody-like binder to E. coli surfaceE. coli
protein
InfectiousEbola infectionan antibody-like binder to Ebola surfaceEbola
protein
InfectiousHepatitis B (HBV) infectionan antibody-like binder to HBV surfaceHBV
protein
InfectiousHepatitis C (HCV) infectionan antibody-like binder to HCV surfaceHCV
protein
InfectiousHuman immunodeficiency virusan antibody-like binder to HIV envelopeHIV
(HIV) infectionproteins or CD4 or CCR5 or
InfectiousM. tuberculosis infectionan antibody-like binder to M. tuberculosisM. tuberculosis
surface protein
InfectiousMalaria (P. falciparum) infectionan antibody-like binder to P. falciparumP. falciparum
surface protein
LipidHepatic lipase deficiency,Hepatic lipase (LIPC)Lipoprotein, intermediate
hypercholesterolemiadensity (IDL)
LipidHyperalphalipoproteinemia 1Cholesteryl ester transfer protein(CETP)Lipoprotein, high density (HDL)
Lipidhypercholesterolemiaan antibody-like binder to low-densityLDL
lipoprotein (LDL), LDL receptor
Lipidhypercholesterolemiaan antibody-like binder to high-densityHDL
lipoprotein (HDL) or HDL receptor
Lipidlipoprotein lipase deficiencylipoprotein lipasechilomicrons and very low
density lipoproteins (VLDL)
LipidLipoprotein lipase deficiency,lipoprotein lipase (LPL)Lipoprotein, very low density
disorders of lipoprotein(VLDL)
metabolism
Lysosomal storageAspartylglucosaminuria (208400)N-Aspartylglucosaminidaseglycoproteins
Lysosomal storageCerebrotendinous xanthomatosisSterol 27-hydroxylaselipids, cholesterol, and bile acid
(cholestanol lipidosis; 213700)
Lysosomal storageCeroid lipofuscinosis Adult formPalmitoyl-protein thioesterase-1lipopigments
(CLN4, Kufs' disease; 204300)
Lysosomal storageCeroid lipofuscinosis InfantilePalmitoyl-protein thioesterase-1lipopigments
form (CLN1, Santavuori-Haltia
disease; 256730)
Lysosomal storageCeroid lipofuscinosis Juvenile formLysosomal transmembrane CLN3 proteinlipopigments
(CLN3, Batten disease, Vogt-
Spielmeyer disease; 204200)
Lysosomal storageCeroid lipofuscinosis Late infantileLysosomal pepstatin-insensitive peptidaselipopigments
form (CLN2, Jansky-Bielschowsky
disease; 204500)
Lysosomal storageCeroid lipofuscinosis ProgressiveTransmembrane CLN8 proteinlipopigments
epilepsy with intellectual disability
(600143)
Lysosomal storageCeroid lipofuscinosis Variant lateTransmembrane CLN6 proteinlipopigments
infantile form (CLN6; 601780)
Lysosomal storageCeroid lipofuscinosis Variant lateLysosomal transmembrane CLN5 proteinlipopigments
infantile form, Finnish type (CLN5;
256731)
Lysosomal storageCholesteryl ester storage diseaselisosomal acid lipaselipids and cholesterol
(CESD)
Lysosomal storageCongenital disorders of N-Phosphomannomutase-2N-glycosylated protein
glycosylation CDG Ia (solely
neurologic and neurologic-
multivisceral forms; 212065)
Lysosomal storageCongenital disorders of N-Mannose (Man) phosphate (P) isomeraseN-glycosylated protein
glycosylation CDG Ib (602579)
Lysosomal storageCongenital disorders of N-Dolicho-P-Glc: Man9GlcNAc2-PP-dolicholN-glycosylated protein
glycosylation CDG Ic (603147)glucosyltransferase
Lysosomal storageCongenital disorders of N-Dolicho-P-Man: Man5GlcNAc2-PP-dolicholN-glycosylated protein
glycosylation CDG Id (601110)mannosyltransferase
Lysosomal storageCongenital disorders of N-Dolichol-P-mannose synthaseN-glycosylated protein
glycosylation CDG Ie (608799)
Lysosomal storageCongenital disorders of N-Protein involved in mannose-P-dolicholN-glycosylated protein
glycosylation CDG If (609180)utilization
Lysosomal storageCongenital disorders of N-Dolichyl-P-mannose: Man-7-GlcNAc-2-PP-N-glycosylated protein
glycosylation CDG Ig (607143)dolichyl-α-6-mannosyltransferase
Lysosomal storageCongenital disorders of N-Dolichyl-P-glucose: Glc-1-Man-9-GlcNAc-2-N-glycosylated protein
glycosylation CDG Ih (608104)PP-dolichyl-α-3-glucosyltransferase
Lysosomal storageCongenital disorders of N-α-1,3-MannosyltransferaseN-glycosylated protein
glycosylation CDG Ii (607906)
Lysosomal storageCongenital disorders of N-Mannosyl-α-1,6-glycoprotein-β-1,2-N-N-glycosylated protein
glycosylation CDG IIa (212066)acetylglucosminyltransferase
Lysosomal storageCongenital disorders of N-Glucosidase IN-glycosylated protein
glycosylation CDG IIb (606056)
Lysosomal storageCongenital disorders of N-GDP-fucose transporter-1N-glycosylated protein
glycosylation CDG IIc (Rambam-
Hasharon syndrome; 266265
Lysosomal storageCongenital disorders of N-β-1,4-GalactosyltransferaseN-glycosylated protein
glycosylation CDG IId (607091)
Lysosomal storageCongenital disorders of N-Oligomeric Golgi complex-7N-glycosylated protein
glycosylation CDG IIe (608779)
Lysosomal storageCongenital disorders of N-UDP-GlcNAc: dolichyl-P NAcGlcN-glycosylated protein
glycosylation CDG Ij (608093)phosphotransferase
Lysosomal storageCongenital disorders of N-β-1,4-MannosyltransferaseN-glycosylated protein
glycosylation CDG Ik (608540)
Lysosomal storageCongenital disorders of N-α-1,2-MannosyltransferaseN-glycosylated protein
glycosylation CDG Il (608776)
Lysosomal storageCongenital disorders of N-α-1,2-MannosyltransferaseN-glycosylated protein
glycosylation, type I (pre-Golgi
glycosylation defects)
Lysosomal storageCystinosisCystinosin (lysosomal cystine transporter)Cysteine
Lysosomal storageFabry's disease (301500)Trihexosylceramide α-galactosidaseglobotriaosylceramide
Lysosomal storageFarber's diseaseCeramidaselipids
(lipogranulomatosis; 228000)
Lysosomal storageFucosidosis (230000)α-L-Fucosidasefucose and complex sugars
Lysosomal storageGalactosialidosis (Goldberg'sProtective protein/cathepsin A (PPCA)lysosomal content
syndrome, combined
neuraminidase and β-
galactosidase deficiency; 256540)
Lysosomal storageGaucher's diseaseGlucosylceramide β-glucosidasesphingolipids
Lysosomal storageGlutamyl ribose-5-phosphateADP-ribose protein hydrolaseglutamyl ribose 5-phosphate
storage disease (305920)
Lysosomal storageGlycogen storage disease type 2alpha glucosidaseglycogen
(Pompe's disease)
Lysosomal storageGM1 gangliosidosis, generalizedGanglioside β-galactosidaseacidic lipid material,
gangliosides
Lysosomal storageGM2 activator protein deficiencyGM2 activator proteingangliosides
(Tay-Sachs disease AB variant,
GM2A; 272750)
Lysosomal storageGM2 gangliosidosisGanglioside β-galactosidasegangliosides
Lysosomal storageInfantile sialic acid storageNa phosphate cotransporter, sialinsialic acid
disorder (269920)
Lysosomal storageKrabbe's disease (245200)Galactosylceramide β-galactosidasesphingolipids
Lysosomal storageLysosomal acid lipase deficiencyLysosomal acid lipasecholesteryl
(278000)esters and triglycerides
Lysosomal storageMetachromatic leukodystrophyArylsulfatase Asulfatides
(250100)
Lysosomal storageMucolipidosis ML II (I-cell disease;N-Acetylglucosaminyl-1-N-linked glycoproteins
252500)phosphotransfeerase catalytic subunit
Lysosomal storageMucolipidosis ML III (pseudo-N-acetylglucosaminyl-1-N-linked glycoproteins
Hurler's polydystrophy)phosphotransfeerase
Lysosomal storageMucolipidosis ML III (pseudo-Catalytic subunitN-linked glycoproteins
Hurler's polydystrophy) Type III-A
(252600)
Lysosomal storageMucolipidosis ML III (pseudo-Substrate-recognition subunitN-linked glycoproteins
Hurler's polydystrophy) Type III-C
(252605)
Lysosomal storageMucopolysaccharidosis MPS I H/Sα-I-Iduronidaseglycosaminoglycans
(Hurler-Scheie syndrome; 607015)
Lysosomal storageMucopolysaccharidosis MPS I-Hα-I-Iduronidaseglycosaminoglycans
(Hurler's syndrome; 607014)
Lysosomal storageMucopolysaccharidosis MPS IIIduronate sulfate sulfataseglycosaminoglycans
(Hunter's syndrome; 309900)
Lysosomal storageMucopolysaccharidosis MPS IIIHeparan-S-sulfate sulfamidaseglycosaminoglycans
(Sanfilippo's syndrome) Type III-A
(252900)
Lysosomal storageMucopolysaccharidosis MPS IIIN-acetyl-D-glucosaminidaseglycosaminoglycans
(Sanfilippo's syndrome) Type III-B
(252920)
Lysosomal storageMucopolysaccharidosis MPS IIIAcetyl-CoA-glucosaminide N-glycosaminoglycans
(Sanfilippo's syndrome) Type III-Cacetyltransferase
(252930)
Lysosomal storageMucopolysaccharidosis MPS IIIN-acetyl-glucosaminine-6-sulfate sulfataseglycosaminoglycans
(Sanfilippo's syndrome) Type III-D
(252940)
Lysosomal storageMucopolysaccharidosis MPS I-Sα-I-Iduronidaseglycosaminoglycans
(Scheie's syndrome; 607016)
Lysosomal storageMucopolysaccharidosis MPS IVGalactosamine-6-sulfate sulfataseglycosaminoglycans
(Morquio's syndrome) Type IV-A
(253000)
Lysosomal storageMucopolysaccharidosis MPS IVβ-Galactosidaseglycosaminoglycans
(Morquio's syndrome) Type IV-B
(253010)
Lysosomal storageMucopolysaccharidosis MPS IXHyaluronidase deficiencyglycosaminoglycans
(hyaluronidase deficiency;
601492)
Lysosomal storageMucopolysaccharidosis MPS VIN-Acetyl galactosamine α-4-sulfateglycosaminoglycans
(Maroteaux-Lamy syndrome;sulfatase (arylsulfatase B)
253200)
Lysosomal storageMucopolysaccharidosis MPS VIIβ-Glucuronidaseglycosaminoglycans
(Sly's syndrome; 253220)
Lysosomal storageMucosulfatidosis (multipleSulfatase-modifying factor-1sulfatides
sulfatase deficiency; 272200)
Lysosomal storageNiemann-Pick disease type ASphingomyelinasesphingomyelin
Lysosomal storageNiemann-Pick disease type BSphingomyelinasesphingomyelin
Lysosomal storageNiemann-Pick disease TypeNPC1 proteinsphingomyelin
C1/Type D ((257220)
Lysosomal storageNiemann-Pick disease Type C2Epididymal secretory protein 1 (HE1; NPC2sphingomyelin
(607625)protein)
Lysosomal storageProsaposin deficiency (176801)Prosaposinsphingolipids
Lysosomal storagePycnodysostosis (265800)Cathepsin Kkinins
Lysosomal storageSandhoff's disease; 268800β-Hexosaminidase Bgangliosides
Lysosomal storageSaposin B deficiency (sulfatideSaposin Bsphingolipids
activator deficiency)
Lysosomal storageSaposin C deficiency (Gaucher'sSaposin Csphingolipids
activator deficiency)
Lysosomal storageSchindler's disease Type IN-Acetyl-galactosaminidaseglycoproteins
(infantile severe form; 609241)
Lysosomal storageSchindler's disease Type IIN-Acetyl-galactosaminidaseglycoproteins
(Kanzaki disease, adult-onset
form; 609242)
Lysosomal storageSchindler's disease Type IIIN-Acetyl-galactosaminidaseglycoproteins
(intermediate form; 609241)
Lysosomal storageSialidosis (256550)Neuraminidase 1 (sialidase)mucopolysaccharides and
mucolipids
Lysosomal storageSialuria Finnish type (Salla disease;Na phosphate cotransporter, sialinsialic acid
604369)
Lysosomal storageSialuria French type (269921)UDP-N-acetylglucosamine-2-epimerase/N-sialic acid
acetylmannosamine kinase, sialin
Lysosomal storageSphingolipidosis Type I (230500)Ganglioside β-galactosidasesphingolipids
Lysosomal storageSphingolipidosis Type II (juvenileGanglioside β-galactosidasesphingolipids
type; 230600)
Lysosomal storageSphingolipidosis Type III (adultGanglioside β-galactosidasesphingolipids
type; 230650)
Lysosomal storageTay-Sachs disease; 272800β-Hexosaminidase Agangliosides
Lysosomal storageWinchester syndrome (277950)Metalloproteinase-2mucopolysaccharides
Lysosomal storageWolman's diseaselysosomal acid lipaselipids and cholesterol
Lysosomal storageα-Mannosidosis (248500), type Iα-D-Mannosidasecarbohydrates and
(severe) or II (mild)glycoproteins
Lysosomal storageβ-Mannosidosis (248510)β-D-Mannosidasecarbohydrates and
glycoproteins
Toxic Moleculealpha hemolysin poisoningan antibody-like binder to alpha hemolysinalpha hemolysin
Toxic Moleculeantrax toxin poisoningan antibody-like binder to anthrax toxinanthrax toxin
Toxic Moleculebacterial toxin-induced shockan antibody-like binder to bacterial toxinbacterial toxin
Toxic Moleculebotulinum toxin poisoningan antibody-like binder to botulinum toxinbotulinum toxin
Toxic MoleculeHemochromatosis (ironiron chelatormolecular iron
poisoning)
Toxic MoleculeMethanol poisoningMethanol dehdrogenaseMethanol
Toxic MoleculeNerve gas poisoningButyryl cholinesteraseSarin
Toxic MoleculePrion disease caused by PRPan antibody-like binder to prion proteinPrion protein PRP
PRP
Toxic MoleculePrion disease caused by PRPcan antibody-like binder to prion proteinPrion protein PRPc
PRPc
Toxic MoleculePrion disease caused by PRPscan antibody-like binder to prion proteinPrion protein PRPsc
PRPsc
Toxic MoleculePrion disease cuased by PRPresan antibody-like binder to prion proteinPrion protein PRPres
PRPres
Toxic MoleculeSepsis or cytokine storman antibody-like binder to cytokines orcytokines
Duffy antigen receptor of chemokines
(DARC)
Toxic Moleculespider venom poisoningan antibody-like binder to spider venomspider venom
Toxic MoleculeWilson diseasecopper chelatormolecular copper

TABLE 8
Complement & Complement Regulatory Molecules
Soluble molecules
Alternative Pathway
Factor B
Factor D
Properdin
C3
C3a
C3b
iC3b
C3c
C3dg
C3dk
C3e
Bb
Factor I
Classical Pathway
C1q
C1r
C1s
C4
C4a
C4b
C2
C4bp
Lectin Pathway
Mannose-Binding Lectin (MBL)
MBL-Associated Serine Protease 1 (MASP1)
MBL-Associated Serine Protease 2 (MASP2)
Late Components
C5
C5a
C6
C7
C8
C9
Receptors
CR1
CR2
CR3
CR4
C3aR
C3eR
Decay-accelerating factor (DAF)
Membrane cofactor protein (MCP)
CD59
C3 Beta chain Receptor
Homologous restriction factor
Control Proteins
C1 inhibitor
C4 binding protein
Factor I
Factor H

Full text: Click here
Patent 2023

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Actinomycin D is a laboratory-grade chemical compound used in various research applications. It is a polypeptide antibiotic produced by the bacterium Streptomyces parvullus. Actinomycin D is known for its ability to inhibit DNA-dependent RNA synthesis, making it a valuable tool for researchers studying cellular processes and gene expression.
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More about "Actinomycin D1"

Actinomycin D1, also known as dactinomycin, is a potent antitumor antibiotic produced by Streptomyces bacteria.
It functions as a DNA-binding agent, inhibiting RNA synthesis and cell division.
Actinomycin D1 has been utilized in the treatment of various cancers, including Wilms' tumor, testicular carcinoma, and Ewing's sarcoma.
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Actinomycin D, a closely related compound, is also a DNA-binding agent that inhibits RNA synthesis.
Penicillin/streptomycin is a common antibiotic mixture used in cell culture to prevent bacterial contamination.
MG132 is a proteasome inhibitor used to study protein degradation, while p27Kip1 is a cyclin-dependent kinase inhibitor involved in cell cycle regulation.
GAPDH is a commonly used housekeeping gene for normalizing gene expression data, and Mouse anti-cyclin D3 is a specific antibody used to detect this cell cycle regulator.
Calyculin A is a protein phosphatase inhibitor, and Rabbit anti-53BP1 (4937) is an antibody that recognizes the DNA damage response protein 53BP1.
The SpectraMax L luminometer is a device used for quantifying luminescent signals, such as those generated by luciferase reporter assays.
Mimosine is an amino acid that can induce cell cycle arrest at the G1/S transition.
By incorporating these related terms and concepts, researchers can enhance their understanding and optimization of Actinomycin D1 studies, leveraging the power of PubCompare.ai's AI-driven insights to streamline their research workflow and achieve better results.
One typo: 'Actnomycin D1' should be 'Actinomycin D1'.