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Aggrecans

Aggrecans are large proteoglycans found in the extracellular matrix of cartilage and other connective tissues.
They play a crucial role in maintaining the structural integrity and hydration of these tissues.
Aggrecans consist of a core protein to which numerous glycosaminoglycan chains are attached, providing the tissue with its characteristic compressive stregth.
Depletion or disruption of aggrecans is associated with the development of osteoarthritis and other degenerative joint disorders.
Understanding the biology and function of aggrecans is key to advancing research into cartilage health and disease.
PubCompare.ai can help optimize your aggrecan research by enhancing reproducibility and accurecy, assisting you in locating the best protocols from literature, preprints, and patents.

Most cited protocols related to «Aggrecans»

At sacrifice the operated knees (mid femur to mid tibia) of all mice, and non-operated knees from 3 animals, were harvested, and the skin and muscle removed. Specimens were fixed in 10% neutral buffered formalin for 24 hrs, decalcified for 3 days in 10% formic acid/5% formalin, and paraffin embedded. Serial 4μm sagittal sections were cut across the width of the medial femoro-tibial joint and mounted on superfrost plus glass slides (3 serial sections per slide) with heating at 85°C for 30 minutes then overnight at 55°C. Sections every 40μm were stained with 0.04% toluidine blue and counterstained with 0.1% fast green (12–15 slides per mouse).
Two observers (CBL, AB) blinded to genotype and post-operative time, scored cartilage aggrecan loss (0–3) and structural damage (0–7), with maximal and summed score (sum of all scores in all slides) recorded as previously described (7 (link)). Each slide received a single score for each parameter representing the maximal score in the three sections on the slide. The number of slides with scores for structural damage was recorded as a measure of the “stage” of OA (width of joint affected). The presence or absence of morphological chondrocyte hypertrophy (enlarged chondrocyte lacunae with lack of toluidine blue stain around a collapsed cell as typically observed in the growth plate or calcified cartilage) in the non-calcified articular cartilage was recorded. Osteophyte size (0 = none, 1 = small ~ the same thickness as the adjacent cartilage, 2 = medium ~ 1–3 × the thickness as the adjacent cartilage, 3 = large >3 × the thickness as the adjacent cartilage) and osteophyte maturity (0 = none, 1 = predominantly cartilaginous, 2 = mixed cartilage and bone with active vascular invasion and endochondral ossification, 3 = predominantly bone) were scored on coded digital images of the same location of the anterior-medial tibia in each animal.
Publication 2009
Aggrecans Animals Blood Vessel Bones Cartilage Cartilages, Articular Cells Chondrocyte Endochondral Ossification Epiphyseal Cartilage Fast Green Femur Formalin formic acid Genotype Hypertrophy Joints Knee Mus Muscle Tissue Osteophyte Paraffin Skin Stains Tibia Tolonium Chloride
The targeting vector plasmid for the Aggrecan knockin mice contains a 2.4 kb 5′ homologous arm, an IRES-CreERT2 cassette followed by a Pgk-neomycin (neo) cassette flanked with FRT sites, a 3.7 kb 3′ homologous arm, and a MC1-thymidine kinase cassette outside of the homology (Indra et al., 1999 (link); Mansour et al., 1988 (link)). The homologous arms were generated by PCR amplification using BAC template DNA from a clone isolated by a screening of a RPCI-22 129S6 Mouse BAC library (BAC PAC Resources). The nucleotide sequence of the PCR products were sequenced, and compared to sequences deposited in the mouse genome database using the BLAT algorithm (Kent et al., 2002 (link)). In the targeting vector, the neo cassette is in the reverse transcriptional orientation to the IRES-CreERT2 cassette. G4 ES cells (George et al., 2007 (link)) were electroporated with 25 micrograms of linearized targeting vector and placed under positive and negative selection according to standard procedures. Correctly targeted ES cell clones were screened by Southern blotting with flanking 5′ and 3′ probes. Chimeras generated by injection of C57BL/6 blastocysts were bred to C57BL/6 mice and all of the analysis was conducted in a mixed 129S6 × C57BL/6 genetic backround. Heterozygous Rosa26 reporter mice (Soriano, 1999b (link)) were bred to heterozygous aggrecan knockin mice (Agc1tm(IRES-creERT2)/+) and tissues from resulting progeny containing one copy of the R26R allele and the Aggrecan knockin allele were stained with X-gal (Gold Bio Technology). We used heterozygous Agc1tm(IRES-creERT2)/+ mice for all experiments, and the Frt-flanked Neo cassette was not removed.
Publication 2009
5-bromo-4-chloro-3-indolyl beta-galactoside Aggrecans Alleles Arm, Upper Blastocyst Chimera Clone Cells Cloning Vectors DNA Library Embryonic Stem Cells Genome Gold Heterozygote Internal Ribosome Entry Sites Mice, Inbred C57BL Mus Neomycin Plasmids Reverse Transcription Thymidine Kinase Tissues
After terminal anesthesia by barbiturate overdose mice were perfused transcardially with 10% formalin (Sigma). Spinal cords were removed, post-fixed overnight, and cryoprotected in buffered 30% sucrose for 48 hours. Frozen sections (30μm horizontal) were prepared using a cryostat microtome (Leica) and processed for immunofluorescence as described16 (link)–18 (link). Primary antibodies were: rabbit anti-GFAP (1:1000; Dako, Carpinteria, CA); rat anti-GFAP (1:1000, Zymed Laboratories); goat anti-CTB (1:1000, List Biology Lab); rabbit anti-5HT (1:2000, Immunostar); goat anti-5HT (1:1000, Immunostar); mouse anti-CSPG22 (link) (1:100, Sigma); rabbit-anti hemagglutinin (HA) (1:500 Sigma); mouse-anti HA (1:3000 Covance); sheep anti-BrdU (1:6000, Maine Biotechnology Services, Portland, ME); rabbit anti-laminin (1:80, Sigma, Saint Louis, MO); guinea pig anti-NG2 (CSPG4) (Drs. E.G. Hughes and D.W. Bergles57 (link), Baltimore, MA); goat anti-aggrecan (1:200, NOVUS); rabbit anti-brevican (1:300, NOVUS); mouse anti-neurocan (1:300, Milipore); mouse anti-phosphacan (1:500, Sigma); goat anti-versican (1:200, NOVUS); rabbit anti-neurglycan C (CSPG5) (1:200, NOVUS). Fluorescence secondary antibodies were conjugated to: Alexa 488 (green) or Alexa 350 (blue) (Molecular Probes), or to Cy3 (550, red) or Cy5 (649, far red) all from (Jackson Immunoresearch Laboratories). Mouse primary antibodies were visualized using the Mouse-on-Mouse detection kit (M.O.M. ®, Vector). BDA tract-tracing was visualized with streptavidin-HRP plus TSB Fluorescein geen or Tyr-Cy3 (Jackson Immunoresearch Laboratories). Nuclear stain: 4′,6′-diamidino-2-phenylindole dihydrochloride (DAPI; 2ng/ml; Molecular Probes). Sections were coverslipped using ProLong Gold anti-fade reagent (InVitrogen, Grand Island, NY). Sections were examined and photographed using deconvolution fluorescence microscopy and scanning confocal laser microscopy (Zeiss, Oberkochen, Germany).
Publication 2016
Aggrecans Alexa 350 Anesthesia Antibodies barbiturate Brevican Bromodeoxyuridine Cavia porcellus Cloning Vectors CSPG4 protein, human DAPI Domestic Sheep Drug Overdose Fluorescein Fluorescent Antibody Technique Formalin Frozen Sections Glial Fibrillary Acidic Protein Goat Gold Hemagglutinin Laminin Mice, House Microscopy, Confocal Microscopy, Fluorescence Microtomy Molecular Probes Neurocan Novus Protein Tyrosine Phosphatase, Receptor Type Z Rabbits Spinal Cord Stains Streptavidin Sucrose Versicans
Differentiation of MSCs was induced by culture under specific conditions for 21 days. For adipogenesis, MSCs were plated at 104 cells/cm2 in complete Dulbecco's modified Eagle's medium (DMEM)-F12 (Invitrogen) with 16 µM biotin, 18 µM panthotenic acid, 100 µM ascorbic acid, 5 µg/ml insulin, 0.03 µM dexamethasone, 1 µg/ml transferring, 2 ng/ml triiodothyronine (T3) and 100 nM rosiglitazone (Sigma-Aldrich, Saint-Quentin Fallavier, France). Formation of lipid droplets was visualized by Oil red O staining on cells fixed by 3% glutaraldehyde for 1 h. For osteogenesis and chondrogenesis, inductive conditions were already reported [46] (link). Chondrogenesis was assessed by RT-qPCR and immunohistochemistry on paraffin sections of pellets using a 1/50 dilution of anti-aggrecan antibody (Chemicon, Millipore, Molsheim) and the "Ultravision detection system anti-polyvalent HRP/DAB" kit (Lab Vision, Francheville, France). Sections were counterstained with Mayer's hematoxylin (Lab Vision) for 3 min and mounted with Eukitt (Sigma-Aldrich). Osteogenic differentiation of MSCs was assessed by RT-qPCR and extracellular matrix mineralization detected as already described [46] (link).
Publication 2010
Acids Adipogenesis Aggrecans Antibodies, Anti-Idiotypic Ascorbic Acid Biotin Cells Chondrogenesis Dexamethasone Extracellular Matrix Glutaral Hematoxylin Immunohistochemistry Insulin Liothyronine Lipogenesis Osteogenesis Paraffin Pellets, Drug Physiologic Calcification Rosiglitazone Technique, Dilution Vision
Real-time PCR (polymerase chain reaction) was performed using a MxPro3000 QPCR system (Agilent Technologies, Stockport, UK). A real-time qPCR assay based on SYBR green detection, using Brilliant III Ultra-Fast SYBR® QPCR mix (Agilent Technologies, Stockport, UK) was used for the transcriptional profiling of eight reference genes including 18s16 (link), GAPDH17 (link), ACTB, HPRT, SDHA (Succinate dehydrogenase complex, subunit A), RPL4 (Ribosomal Protein L4), PPIA and YWHAZ (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein)18 (link). The choice of selected reference gene targets for analysis was largely based on reference gene suitability previously analysed in loaded, isolated chondrocytes3 (link), reported to be stable under mechanical perturbation in other tissues19 (link), 20 (link) or reported to be stable in chondrocytes under other experimental conditions21 (link). In addition, the analysis of two commonly examined cartilage genes matrix metalloproteinase 3 (MMP3)22 (link) and aggrecan (ACAN)17 (link) (Table I) were performed. Both the in-house primers and those primer sequences taken from the literature all span intron-exon boundaries. All reactions were carried out at an annealing temperature of 60°C; cycling conditions were: 95°C–3 minutes (1 cycle), 95°C–15 s followed by 60°C–30 s (40 cycles), 95°C–1 minute followed by 60°C–30 s followed by 95°C–30 s (1 cycle). Primers were purchased from MWG-Biotech AG (Ebersberg, Germany), each utilised at a final concentration of 200 nM and validated using a standard curve of five serial dilutions so that all primer efficiencies were between 90 and 110%23 (link). Reactions where sterile water replaced template cDNA were used as negative controls to ensure product specificity. For MMP3 and ACAN expression, relative quantification was calculated using the 2−ΔΔCT method24 (link), using the unloaded controls as a reference group to quantify relative changes in target gene expression.
Publication 2016
Aggrecans Biological Assay Cartilage Chondrocyte DNA, Complementary Exons Gene Expression Genes Genetic Selection Introns Matrix Metalloproteinase 3 Oligonucleotide Primers Polymerase Chain Reaction Proteins Protein Subunits Real-Time Polymerase Chain Reaction ribosomal protein L4 Sterility, Reproductive Succinate Dehydrogenase SYBR Green I Technique, Dilution Transcription, Genetic Tryptophan Tyrosine 3-Monooxygenase

Most recents protocols related to «Aggrecans»

Example 3

Pluripotent stem cell-derived cells (2.5×105 cells), having been passaged at least five times, were collected in 15-ml conical tubes and centrifuged at 150 g for 5 min after which they were transferred to serum-free chondrogenic media (Lonza Basel Switzerland) in the presence or absence of TGFβ3 (10 ng/ml; Peprotech, Rocky Hill, N.J.). The media was changed twice weekly. At the end of 3 weeks, some cell pellets were fixed with Z-Fix (Anatech, Battle Creek, Mich.), paraffin-embedded, sectioned, and assessed for their chondrogenic differentiation status as detailed below for histochemical stains, immunocytochemical markers, and mRNA as described below.

Total RNA was extracted from cell pellets with RNeasy kit (Invitrogen, Carlsbad, Calif.) and was reverse transcribed to cDNA with SuperScript (Invitrogen, Carlsbad, Calif.). Real-time RT-PCR of collagen IIA1 and aggrecan was performed using Taqman-® Gene expression assays as per manufacturer's instructions (Applied Biosystems, Foster City, Calif.).

Patent 2024
Aggrecans Biological Assay Cells Chondrogenesis Collagen Culture Media, Serum-Free DNA, Complementary Gene Expression Paraffin Pellets, Drug Pluripotent Stem Cells Real-Time Polymerase Chain Reaction RNA, Messenger Staining
Expression of proteins of interest in chondrocytes and articular cartilage tissues were explored through western blot analysis. Briefly, cultured chondrocytes and previously ground tissues powder (100 mg) were lysed for 1 h using ice cold 1 × RIPA lysis buffer (Beyotime) supplemented with phenylmethanesulfonyl fluoride (PMSF, 1 mM, Beyotime). The lysates were centrifugated for 10 min at 4 °C and 12,000 rpm. The supernatant was transferred to a new tube for protein quantification. A standard curve was prepared with gradient concentration of BSA according to the instructions of a BCA quantification kit (Beyotime, China). For western blotting assay, the protein samples were mixed with 5 × loading buffer and heated for 10 min at 98 °C. Thereafter, 30 ug protein samples were separated by 10%–12.5% SDS-PAGE gels and transferred to polyvinylidene fluoride membranes (Bio-Rad, USA). The membrane was rinsed with TBS-T, following with 5% nonfat milk for 1.5 h. Then, the membranes were incubated with primary antibodies specific to HBEGF (1:200, Abcam, Cat# ab92620), MMP3 (1:1000, Abcam, Cat# ab137659), MMP13 (1:1000, Abcam, Cat# ab84594), ADAMTS4 (1:1000, Abcam, Cat# ab84792), COL2A1 (1:1000, Abcam, Cat# ab34712), Aggrecan (1:100, ABclonal, Cat# A8536), or β-actin (1:2000) (Cell Signaling Technology, Cat# 4970) at 4 °C overnight. The blots were then rinsed and probed with secondary HRP-conjugated anti-rabbit or anti-mouse antibodies (Beyotime Institute of Biotechnology, Nantong, China), and proteins were detected using an ECL kit (Santa Cruz Biotechnology, TX, USA).
Publication 2023
Actins Aggrecans Anti-Antibodies Antibodies Buffers Cartilages, Articular Chondrocyte Cold Temperature Gels HBEGF protein, human Milk, Cow's MMP3 protein, human MMP13 protein, human Mus Phenylmethylsulfonyl Fluoride polyvinylidene fluoride Powder Proteins Rabbits Radioimmunoprecipitation Assay SDS-PAGE Tissue, Membrane Tissues Western Blot
Referring to the common experimental animal randomization method and the 3R principle, 36 C57BL/6 male mice (6 weeks old) were randomized into the following three groups: a sham surgery group (incision of the right knee, lack of ACL transection surgery) and two groups in which the right knee articular cartilage underwent anterior cruciate ligament transection (ACLT) to establish an animal model of OA (n = 12). The two OA experimental groups were administered intra-articular injections of either AAV-miR-760 mimic or AAV-miR-760 mimic + AAV-OE HBEGF immediately after ACLT surgery (0 weeks). The injection procedure was repeated after 4 weeks, and the mice were sacrificed at 4 weeks after the second injection. The right knee joints of each group were harvested for the extraction of RNA (n = 3) and proteins (n = 3), with OA progression being assessed based on the expression of HBEGF, MMP3, MMP13, ADAMTS4, COL2A1, and Aggrecan. Briefly, mice were sacrificed with the nape facing up. Then, the front legs were immobilized and the skin and soft tissue were removed on the hind leg to make an incision at the knee joint. After exposing the tibial plateau, the surface resembling a regular translucent sphere (articular cartilage) was severed and processed for RNA and protein studies. In addition, the right knee joints of the remaining mice (n = 6) were dissected and processed for safranin-O/fast green staining and immunohistochemistry staining.
Publication 2023
Aggrecans Animal Model Animals, Laboratory Anterior Cruciate Ligament Cartilages, Articular Disease Progression Fast Green Heparin-binding EGF-like Growth-Factor Intra-Articular Injections Knee Joint Males Mice, Inbred C57BL Mice, Laboratory MMP3 protein, human MMP13 protein, human Operative Surgical Procedures Proteins safranine T Skin Tibia Tissues

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Publication 2023
Aggrecans anti-IgG Buffers Cells Fluorescein-5-isothiocyanate Glycerin Goat Hyperostosis, Diffuse Idiopathic Skeletal Microscopy, Fluorescence paraform Rabbits Serum Albumin, Bovine Triton X-100

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Publication 2023
Aggrecans Antibodies BCL2 protein, human Biological Assay Buffers Caspase 3 Cells Centrifugation Chemiluminescence Cold Temperature Collagen Goat Mitogen-Activated Protein Kinase 3 MMP2 protein, human MMP3 protein, human MMP13 protein, human Mus NFE2L2 protein, human polyvinylidene fluoride Proteins Rabbits Radioimmunoprecipitation Assay SDS-PAGE SOD2 protein, human SOX9 protein, human Super C resin Tissue, Membrane

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Aggrecan is a large proteoglycan found in the extracellular matrix of cartilage and other connective tissues. It plays a key role in maintaining the structural integrity and function of these tissues.
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MMP13 is a matrix metalloproteinase enzyme that plays a role in the breakdown of extracellular matrix components. It is involved in the remodeling and degradation of the extracellular matrix.

More about "Aggrecans"

Aggrecans, also known as proteoglycans, are essential components of the extracellular matrix (ECM) in cartilage and other connective tissues.
These large molecules play a crucial role in maintaining the structural integrity, hydration, and compressive strength of these tissues.
Aggrecans consist of a core protein to which numerous glycosaminoglycan (GAG) chains are attached, providing the tissue with its characteristic properties.
Depletion or disruption of aggrecans is strongly associated with the development of osteoarthritis and other degenerative joint disorders.
Understanding the biology and function of aggrecans is key to advancing research into cartilage health and disease.
This research often involves techniques like RNA extraction using TRIzol reagent or the RNeasy Mini Kit, as well as Western blotting with antibodies like Ab34712, Ab39012, Ab36861, and Ab3778 to detect and quantify aggrecan and related proteins like MMP13.
PubCompare.ai, an AI-driven platform, can optimize your aggrecan research by enhancing reproducibility and accuracy.
The tool helps you locate the best protocols from the literature, preprints, and patents, streamlining your research process and helping you achieve better results.
By utilizing the insights gained from MeSH term descriptions and metadescriptions, you can leverage the power of PubCompare.ai to advance your understanding of this crucial cartilage component and its role in joint health and disease.