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Capreomycin

Capreomycin is a polypeptaide antibiotic derived from Streptomyces capreolus.
It is effectice against Mycobacterium tuberculosis and other mycobacteria, including those resistant to other antitubercular drugs.
Capreomycin inhibits protein synthesis by binding to the 30S ribosomal subunit.
It is used in the treatment of multidrug-resistant tuberculosis (MDR-TB) and extensively drug-resistant tuberculosis (XDR-TB).
Capreomycin may cause ototoxicity and nephrotoxicity as adverse effects.

Most cited protocols related to «Capreomycin»

To examine the potential analytical advantage of whole genome sequencing comparison was made with three commercial tests: (1) the Xpert MTB/RIF (Cepheid Inc., USA) which targets the rpoB gene for RMP resistance; (2) the LPA MTBDRplus for MDR-TB (Hain Lifescience, Germany) which targets rpoB, katG and inhA for resistance to RMP and INH; and (3) the LPA MTBDRsl (Hain Lifescience, Germany) which targets gyrA, rrs and embB for resistance to the fluoroquinolones (FLQ), aminoglycosides and ethambutol, respectively. In silico versions were developed based on the polymorphisms used by these assays and their performance compared to the whole genome mutation library. In particular, in silico analysis of the six datasets was performed and analytical sensitivities and specificities of the inferred resistance relative to the reported phenotype were compared (Figure 2, Additional file 1: Figures S3 and S4). KvarQ [35 (link)], a new tool that directly scans fastq files of bacterial genome sequences for known genetic polymorphisms, was run across all 792 samples using the MTBC test suite and default parameters. Sensitivity and specificity achieved by this method using phenotypic DST results as the reference standard were calculated.

Inferred analytical accuracies of the whole genome mutation library and three commercial molecular tests for resistance. In silico analysis of published sequence data using mutation libraries derived from XpertMTB/RIF (Cepheid Inc., USA) (purple), MTBDRsl (red) and MTBDRplus (orange) (Hain Life Sciences, Germany), and the curated whole genome library (blue). For each library in silico inferred resistance phenotypes were compared to reported phenotypes obtained from conventional drug susceptibility testing. Errors bars correspond to 95% confidence intervals. Abbreviations: AMK, amikacin; CAP, capreomycin; EMB, ethambutol; ETH, ethionamide; INH, Isoniazid; KAN, kanamycin; MDR, multi-drug resistance; MOX, moxifloxacin; OFX, ofloxacin; PZA, pyrazinamide; RMP, rifampicin; STR, streptomycin; XDR, extensive drug resistance.

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Publication 2015
ADRB2 protein, human Amikacin Aminoglycosides Biological Assay Capreomycin DNA Library Ethambutol Ethionamide Fluoroquinolones Genes Genetic Polymorphism Genome, Bacterial Genomic Library INHA protein, human Isoniazid Kanamycin Moxifloxacin Multi-Drug Resistance Mutation Ofloxacin Phenotype Pyrazinamide Radionuclide Imaging Resistance, Drug Rifampin Sequence Analysis Streptomycin Susceptibility, Disease

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Publication 2015
Amikacin Capreomycin Cetrimonium Bromide Ciprofloxacin Communicable Diseases Cortex, Cerebral Ethambutol Gene Deletion Genome Insertion Mutation Isoniazid Kanamycin Moxifloxacin Mycobacterium Mycobacterium tuberculosis Ofloxacin Pharmaceutical Preparations Phenotype Pyrazinamide Reconstructive Surgical Procedures Rifampin Single Nucleotide Polymorphism Streptomycin Susceptibility, Disease
We selected 337 clinical isolates of M. tuberculosis with diverse drug susceptibility patterns. Strains were collected both retrospectively and prospectively from 2008 to 2013 from all 11 districts of KwaZulu-Natal (Table 1). Strains were chosen for study inclusion on the basis of a predetermined drug resistance pattern so that the dataset was heavily weighted toward drug-resistant strains rather than accurately reflecting the epidemiology of the region. Written informed consent was obtained from study participants prior to cohort enrollment. Biomedical Research Ethics Council (BREC) approval from the University of KwaZulu-Natal was granted for whole genome sequencing of clinical strains. On all study isolates, drug susceptibility testing (DST) was performed by the critical concentration method, using the WHO recommended concentrations [27 ]. The following drugs were assayed in all strains, with their respective critical concentration in parentheses (in μg/mL): rifampicin (1.0), isoniazid (0.2 and/or 1.0), streptomycin (2.0), kanamycin (6.0), and ofloxacin (2.0). Extended DST was performed for key isolates (Table 1) with the following drugs: capreomycin (10.0), ethambutol (7.5), and ethionamide (10.0). Pyrazinamide resistance testing was performed using PZA MGIT (100.0) or Nicotinamide (500.0). Subject data included age, gender, AFB smear, and HIV status, when available. Study participants were assigned GPS coordinates corresponding to their home provincial district or site of sputum collection.
We also selected for sequencing three historical strains previously collected in KwaZulu-Natal for resequencing [25 (link),24 (link)]: KZN4207 (drug susceptible, collected in Durban in 1995), KZN1435 (MDR, collected in Durban in 1994), and KZN605 (XDR, collected in Tugela Ferry in 2005).
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Publication 2015
Capreomycin Ethambutol Ethionamide Isoniazid Kanamycin Mycobacterium tuberculosis Niacinamide Ofloxacin Pharmaceutical Preparations Pyrazinamide Resistance, Drug Rifampin Sputum Strains Streptomycin Susceptibility, Disease
Following review of available data, a library of mutations predictive of drug resistance was compiled. First, mutations from two publically available web-based tools TBDreaMDB [18 (link)] and MUBII-TB-DB [19 (link)] were extracted. Second, phylogenetic SNPs at drug resistance loci were removed (see Additional file 1: Table S2 for the full list), as they have been historically misclassified as drug resistance markers [20 (link),21 (link)]. And third, recent literature was consulted to include mutations and loci not described in TBDreaMDB and MUBII-TB-DB. (See Additional file 1: Table S1 for a list of source materials). Drugs included were amikacin (AMK), capreomycin (CAP), ethambutol (EMB), ethionamide (ETH), isoniazid (INH), kanamycin (KAN), moxifloxacin (MOX), ofloxacin (OFX), pyrazinamide (PZA), rifampicin (RMP), streptomycin (STR), para-aminosalicylic acid (PAS), linezolid (LZD), clofazimine (CFZ) and bedaquiline (BDQ). As presented in Table 1, the library comprised 1,325 polymorphisms (SNPs and indels) at 992 nucleotide positions from 31 loci, six promoters and 25 coding regions (see [22 ] for full list). In addition to examining individual drugs we considered the cumulative loci for MDR- and XDR-TB. Circos software [23 (link)] was used to construct circular genomic region variation maps. Polymorphisms associated with MDR- and XDR-TB are shown in Figure 1 (See Additional file 1: Figure S1 for full details).

Summary of mutations included in the curated whole genome drug resistance library

DrugLociNo. variable sitesSNPsIndels
INHkatG24128625
katG promoter330
inhA12150
inhA promoter9110
ahpC880
ahpC promoter13140
kasA8110
RMPrpoB8913519
rpoC880
EMBembB1231531
embA550
embA promoter330
embC25260
embR22240
STRrrs21250
rpsL14190
PZApncA21526964
pncA promoter460
rpsA340
panD9111
ETHethA33295
ethR340
inhA promoter330
inhA330
FLQsgyrA15220
gyrB22290
AMKrrs890
CAPrrs340
tlyA261810
KANrrs340
eis promoter9100
PASthyA23175
folC16190
ribB110
LZDrrl220
rplC110
BDQ CFZRv0678752

AMK, amikacin; BDQ, bedaquiline; CAP, capreomycin; CFZ, clofazimine; EMB, ethabutol; ETH, ethionamide; FLQs, fluoroquinolones; INH, isoniazid; KAN, kanamycin; LZD, linezolid; PAS, para-aminosalycylic acid; PZ, pyrazinamide; RMP, rifampicin; STR, streptomycin.

Polymorphism in the curated library used for predicting multi-drug resistant TB (MDR-TB) and extensive-drug resistant TB (XDR-TB). (A) Polymorphisms associated with MDR-TB. (B) Polymorphisms associated with XDR-TB. Colour-coded bars in the Circos plot represent genes described to be involved in drug resistance (from Table 1). On top of each of these bars a grey histogram shows the mutation density (calculated as the number of polymorphic sites within windows of 20 bp) derived from the curated list of DR-associated mutations. These grey areas highlight the presence of DR-associated regions in candidate genes, which in some cases span the whole gene (for example, katG) or are confined to a certain region of the gene (for example, rpoB). Vertical black lines indicate the frequency of mutations (that is, the number of times the mutation has been observed) in phenotypically resistance isolates. Internal black lines show co-occurring mutations both within and between genes. The thickness of these lines is proportional to the frequency of the mutations appearing together.

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Publication 2015
Acids ADRB2 protein, human Amikacin Aminosalicylic Acid bedaquiline Capreomycin Clofazimine DNA Library Ethambutol Ethionamide Extensively Drug-Resistant Tuberculosis Fluoroquinolones Genes Genetic Polymorphism Genome INDEL Mutation Isoniazid Kanamycin Linezolid Moxifloxacin Multi-Drug Resistance Mutation Neutrophil Nucleotides Ofloxacin Pharmaceutical Preparations Pyrazinamide Resistance, Drug Rifampin Single Nucleotide Polymorphism Streptomycin
Three sputum specimens were obtained from each patient at NTP sputum microscopy centers throughout the country. Direct smears with Ziehl-Neelsen staining were examined by light microscopy at local microscopy centers. One AFB smear positive sputum sample was sent to NRL in Tbilisi where it was processed using standard methodologies (decontaminated in a BSL3 area with N-acetyl-L-cysteine-sodium hydroxide, centrifuged, and the sediment was then suspended in 1.5 ml of phosphate buffer) [11] (link). The processed specimen was inoculated on to both Löwenstein-Jensen (LJ) based solid medium and the BACTEC MGIT 960 broth culture system. The duration of incubation for LJ solid culture was 60 days and for MGIT broth culture 42 days. Positive cultures by either method were confirmed to be Mycobacterium tuberculosis complex (MTBC) using the MTBDRplus assay along with colony morphology [6] . DST for INH and RIF was performed using either the absolute concentration method on LJ medium (INH 0.2 µg/ml, RIF 40 µg/ml) or in 7H9 broth with the BACTECT MGIT 960 system (INH 0.1 µg/ml, RIF 1 µg/ml) [12] . DST to second-line drugs (SLDs) was performed using the proportion method on LJ medium with the following drug concentrations: ethionamide-40.0 µg/ml; ofloxacin-2.0 µg/ml; para-aminosalicylic acid-0.5 µg/ml, capreomycin-40.0 µg/ml and KM-30.0 µg/ml [13] . The NRL has undergone external quality assessment by the Antwerp WHO Supranational TB Reference Laboratory annually since 2005. The last round of quality control for first-line drugs was performed in 2009 with 97% accuracy for INH and 100% for RIF.
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Publication 2012
Aminosalicylic Acid Biological Assay Buffers Capreomycin Culture Techniques Ethionamide hydroxide ion Light Microscopy Microscopy Mycobacterium tuberculosis Ofloxacin Patients Pharmaceutical Preparations Phosphates Sodium, Acetylcysteine Sputum

Most recents protocols related to «Capreomycin»

Drug resistance was defined as resistance to at least one of the aforementioned anti-TB drugs. MDR was defined as TB resistance to at least RFP and INH. Mono-resistance (MR) refers to resistance to only one of the aforementioned anti-TB drugs. Polydrug resistance (PDR) refers to resistance to >1 first-line anti-TB drug, other than resistance to both RFP and INH.[9 (link)] Extensively drug-resistant (XDR) was defined as resistance to at least RFP and INH, as well as any fluoroquinolone (levofloxacin) and at least one of the injectable second-line anti-TB drugs (amikacin and capreomycin). Pre-extensive drug-resistant (pre-XDR)-TB was defined as resistance to RFP, INH, and either the fluoroquinolones or one of the injectable second-line anti-TB drugs, but not both. New cases were defined as cases who had never been previously treated for TB or had taken anti-TB drugs for <1 month. Relapse cases were defined as cases that had received 1 month or more of anti-TB drugs before the current TB episode.[10 ] However, the definitions of pre-XDR and XDR were revised and applied in January 2021. As all TB cases included in this study were from 2012 to 2020, we followed the old definitions.
Publication 2023
Amikacin Capreomycin Extensively Drug-Resistant Tuberculosis Fluoroquinolones Levofloxacin Pharmaceutical Preparations Relapse Resistance, Drug
Clinical specimens from suspected TB patients were collected for preparing an acid-fast bacillus smear, and culture.[8 ] Species identification was performed using p-nitrobenzoic acid, and 2-thiophene carboxylic acid hydrazide testing. Patients with Nontuberculosis mycobacteria infection were excluded. DST for TB strains was performed using the proportion method on Löwenstein–Jensen medium, with the following concentrations of anti-TB drugs: rifampicin (RFP), 40 μg/mL; isoniazid (INH), 0.2 μg/mL; streptomycin, 4.0 μg/mL; ethambutol, 2.0 μg/mL; levofloxacin, 2.0 μg/mL; amikacin, 30.0 μg/mL; capreomycin, 40.0 μg/mL. TB strains were deemed to be resistant to a specific drug when the growth rate was ≥1% of that of the control. The standard strain H37Rv was used as an internal quality control and included for each batch of culture.
Publication 2023
2-thiophene carboxylic acid 4-nitrobenzoic acid Acids Amikacin Bacillus Batch Cell Culture Techniques Capreomycin Ethambutol Hydrazide Levofloxacin Mycobacterium Infections Patients Pharmaceutical Preparations Rifampin Strains Streptomycin
Capreomycin, D-LAK peptides (D-LAK120-A or D-LAK120-HP13) and mannitol were dissolved in ultra-pure water at different mass ratios (Table I) to make a final solute concentration of 1% (w/v). The solutions were spray dried using a laboratory spray dryer (Mini Spray Dryer B-290, Büchi Labortechnik, Flawil, Switzerland) coupled with a high-performance cyclone under the following parameters: inlet temperature 80°C; nitrogen atomization flow rate 742 L/h; air aspiration 38 m3/min; liquid feed rate 2.1 mL/min. A two-fluid spray nozzle with an internal diameter of 0.7 mm (Büchi Labortechnik, Flawil, Switzerland) was used and the spray dryer was operated at the open-loop configuration. D-LAK120-A and D-LAK120-HP13 correspond to A series and B series, respectively. A total of 16 formulations were produced, with eight formulations for each peptide (Table I). The mass ratios of peptide to capreomycin (4:1 or 8:1, w/w) used in the formulations were determined according to their minimum inhibitory concentrations (MICs) that produced synergistic effect against M. smegmatis mc2 and Mtb Bleupan strains [4 (link), 6 (link)]. The total drug content ranged from 2 to 20%.

The Composition of Co-Spray Dried Formulations Containing Capreomycin Sulfate (Cap), D-LAK Peptide and Mannitol

SamplePeptideCap (%, w/w)Peptide (%, w/w)Mannitol (%, w/w)
A0D-LAK120-ANil2.098.0
A10.52.097.5
A20.54.095.5
A31.04.095.0
A41.08.091.0
A52.08.090.0
A62.016.082.0
A74.016.080.0
B0D-LAK120-HP13Nil2.098.0
B10.52.097.5
B20.54.095.5
B31.04.095.0
B41.08.091.0
B52.08.090.0
B62.016.082.0
B74.016.080.0
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Publication 2023
Capreomycin Capreomycin Sulfate Cyclonic Storms Mannitol Minimum Inhibitory Concentration Nitrogen Peptides Pharmaceutical Preparations Strains
The production yield was calculated as the mass of powder collected after spray drying divided by the total mass of solid input. To measure the drug content in the co-spray dried powder, weighed powder was dissolved in ultra-pure water to prepare a 5 mL solution. The dissolved sample was filtered through a 0.45-µm nylon membrane filter and quantified with high-performance liquid chromatography (HPLC, Agilent 1260 Infinity, Agilent Technologies, Santa Clara, USA). The contents of capreomycin, peptide and mannitol were measured separately and were calculated as the measured amount with respect to the powder mass. The HPLC method for quantification of capreomycin was adopted and modified according to a previous study [14 (link)]. The mobile phase consisted of 0.1% TFA aqueous solution (pH = 2) and acetonitrile (95:5, v/v) was run at a rate of 1 mL/min for 10 min. Each sample containing 50 μL solution was injected and passed through the C18 column (5 μm, 250 mm, Agilent, USA) at room temperature, and the capreomycin was detected by UV at wavelength 268 nm. The capreomycin IIA/IIB eluted at approximately 4.6 min and capreomycin IA/IB at around 5.4 min. Linearity for total capreomycin was demonstrated between 5.0 μg/mL and 200 μg/mL (R2 = 0.9999). D-LAK peptides were quantified using an established HPLC method [9 (link)]. The mobile phase consisted of acetonitrile and ultra-pure water with 0.1% TFA. A linear gradient from 20 to 80% acetonitrile was applied over 20 min at 1 mL/min. Each sample containing 100 μL of solution was injected by an auto-sampler and passed through a C18 column (250 mm × 4.6 mm, 5 μm, VydacTM GraceTM, IL, USA) at ambient temperature. The peptide was detected by UV at wavelength 220 nm. The retention time of D-LAK peptides was around 9.85 min. Linearity for D-LAK peptides was demonstrated between 8.0 μg/mL and 200 μg/mL (R2 = 0.9998). The HPLC method for mannitol measurement was detailed in Sect. “Aerosol performance and quantification of mannitol”.
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Publication 2023
acetonitrile Capreomycin GZMB protein, human High-Performance Liquid Chromatographies Mannitol Nylons Peptides Powder Retention (Psychology) Tissue, Membrane
Drug susceptibility was determined using the 1% proportion method on L–J medium according to the guidelines of the WHO [10 (link)], with rifampin (RIF), 40 μg/ml; isoniazid (INH), 0.2 μg/ml; streptomycin (SM), 10 μg/ml; ethambutol (EMB), 2 μg/ml; capreomycin (CM), 40 μg/ml; kanamycin (KM), 30 μg/ml; ofloxacin (OFX), 2 μg/ml; amikacin (AM). The MDR-TB was defined as resistance to at least INH and RIF. Extensively drug-resistant tuberculosis (XDR-TB) isolates were defined as MDR-TB isolates with additional resistance to both OFX and KM [11 (link)].
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Publication 2023
Amikacin Capreomycin Ethambutol Extensively Drug-Resistant Tuberculosis Kanamycin Ofloxacin Pharmaceutical Preparations Rifampin Streptomycin Susceptibility, Disease

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The MGIT 960 is a laboratory instrument designed for the automated detection and identification of mycobacteria in clinical samples. It utilizes liquid culture technology to rapidly detect the presence of mycobacteria, including Mycobacterium tuberculosis, in a controlled and efficient manner.
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The BACTEC MGIT 960 system is a fully automated mycobacterial growth indicator tube (MGIT) system designed for the detection and identification of mycobacteria in clinical specimens. The system utilizes fluorescent technology to continuously monitor for bacterial growth in liquid culture media.
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The MGIT 960 system is a fully automated, high-throughput diagnostic instrument designed for the detection and identification of mycobacteria from clinical specimens. The system utilizes fluorescent technology to monitor the growth of mycobacteria in liquid culture, providing a rapid and efficient method for the diagnosis of tuberculosis and other mycobacterial infections.
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Ofloxacin is a synthetic antibacterial agent that belongs to the class of fluoroquinolone drugs. It is a broad-spectrum antibiotic that is effective against a variety of gram-positive and gram-negative bacteria. Ofloxacin is commonly used in the treatment of various bacterial infections.
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Capreomycin is an antibiotic used in the treatment of tuberculosis. It is a polypeptide antibiotic produced by the bacterium Streptomyces capreolus. Capreomycin functions by inhibiting protein synthesis in bacterial cells.
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The BACTEC MGIT 960 is a fully automated mycobacterial detection system that utilizes liquid culture technology to facilitate the rapid detection of mycobacteria, including Mycobacterium tuberculosis, in clinical specimens. The system employs fluorescence-based technology to continuously monitor the growth of mycobacteria in culture tubes, providing timely and accurate results.
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The Xpert MTB/RIF is a molecular diagnostic test developed by Cepheid. It is designed to detect the presence of Mycobacterium tuberculosis (MTB) and identify resistance to the antibiotic rifampicin (RIF) directly from sputum samples. The test utilizes real-time PCR technology to provide rapid and accurate results.
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Amikacin is a laboratory-grade antibiotic used for research and analytical purposes. It is a broad-spectrum aminoglycoside antibiotic effective against a variety of bacterial species. Amikacin functions by inhibiting bacterial protein synthesis, which leads to cell death. This product is intended for research use only and not for use in diagnostic or therapeutic procedures.
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AlamarBlue is a cell viability reagent that uses a colorimetric/fluorometric growth indicator based on the detection of metabolic activity. It provides a quantitative measure of cell proliferation and cytotoxicity.

More about "Capreomycin"

Capreomycin is a polypeptide antibiotic derived from the bacterium Streptomyces capreolus.
It is a powerful weapon in the fight against multidrug-resistant tuberculosis (MDR-TB) and extensively drug-resistant tuberculosis (XDR-TB), two of the most challenging forms of this deadly disease.
This antibiotic works by inhibiting protein synthesis in Mycobacterium tuberculosis and other mycobacteria, including those that have developed resistance to other antitubercular drugs.
Capreomycin binds to the 30S ribosomal subunit, disrupting the bacterial cells' ability to produce the proteins they need to survive and thrive.
The MGIT 960 system and BACTEC MGIT 960 system are commonly used diagnostic tools that can detect the presence of Mycobacterium tuberculosis, including strains that are resistant to Capreomycin and other antibiotics.
Ofloxacin, Amikacin, and Kanamycin are other antibiotics that may be used in combination with Capreomycin to treat MDR-TB and XDR-TB.
While Capreomycin is a valuable tool in the fight against drug-resistant tuberculosis, it is not without its drawbacks.
Potential side effects include ototoxicity (damage to the ears) and nephrotoxicity (kidney damage).
Careful monitoring and management of these side effects is crucial for ensuring the safe and effective use of Capreomycin in the treatment of this deadly disease.
The Xpert MTB/RIF assay is another diagnostic tool that can rapidly detect the presence of Mycobacterium tuberculosis and identify rifampicin resistance, which is a key indicator of MDR-TB.
This assay, coupled with the use of Capreomycin and other antibiotics, can help clinicians make informed decisions about the best course of treatment for their patients.
Overall, Capreomycin is a critical component in the fight against drug-resistant tuberculosis, and its use must be carefully balanced with the potential risks of ototoxicity and nephrotoxicity.
With the help of advanced diagnostic tools and a comprehensive treatment approach, Capreomycin can play a vital role in saving lives and combating this global health threat.