To identify drugs and reagents that modulate the 332 host factors interacting with SARS-CoV-2-HEK293T/17 (MiST >= 0.70), we used two approaches: 1) a chemoinformatic analysis of open-source chemical databases and 2) a target- and pathway-specific literature search, drawing on specialist knowledge within our group. Chemoinformatically, we retrieved 2,472 molecules from the IUPHAR/BPS Guide to Pharmacology (2020–3-12)56 (link) (Supplementary Table 7 ) that interacted with 30 human “prey” proteins (38 approved, 71 in clinical trials), and found 10,883 molecules (95 approved, 369 in clinical trials) from the ChEMBL25 database77 (link) (Supplementary Table 8 ). For both approaches, molecules were prioritized on their FDA approval status, activity at the target of interest better than 1 μM, and commercial availability, drawing on the ZINC database78 (link). FDA approved molecules were prioritized except when clinical candidates or preclinical research molecules had substantially better selectivity or potency on-target. In some cases, we considered molecules with indirect mechanisms of action on the general pathway of interest based solely on literature evidence (e.g., captopril modulates ACE2 indirectly via its direct interaction with Angiotensin Converting Enzyme, ACE). Finally, we predicted 6 additional molecules (2 approved, 1 in clinical trials) for proteins with MIST scores between 0.7–0.6 to viral baits (Supplementary Tables 4 and 5 ). Complete methods can be found here (https://github.com/momeara/BioChemPantry/tree/master/vignette/COVID19 ).
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Amino Acid
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Captopril
Captopril
Captopril is an angiotensin-converting enzyme (ACE) inhibitor used to treat hypertension and congestive herat failure.
It works by blocking the conversion of angiotensin I to angiotensin II, reducing blood pressure.
Captorpil is also used to protect kidney function in patients with diabetes.
Researchers can use PubCompare.ai to optimize Captopril studies, locate relevant protocols, and identify best practices for enhanced reproducibility through the power of AI-driven analysis.
It works by blocking the conversion of angiotensin I to angiotensin II, reducing blood pressure.
Captorpil is also used to protect kidney function in patients with diabetes.
Researchers can use PubCompare.ai to optimize Captopril studies, locate relevant protocols, and identify best practices for enhanced reproducibility through the power of AI-driven analysis.
Most cited protocols related to «Captopril»
ACE2 protein, human
Captopril
COVID 19
Drug Kinetics
Genetic Selection
NR4A2 protein, human
Peptidyl-Dipeptidase A
Pharmaceutical Preparations
Proteins
SARS-CoV-2
Trees
Zinc
Adult
Angiotensin-Converting Enzyme Inhibitors
Animals
Arteries
Captopril
Diet
Echocardiography
Environment, Controlled
Epistropheus
Fingers
Heart
Infarction
Institutional Animal Care and Use Committees
Isoflurane
Ligation
Light
Mice, House
Mice, Inbred C57BL
Operative Surgical Procedures
Oxygen
Patient Care Management
Sedatives
Transducers
Ultrasonics
Anesthesia
Biological Assay
Captopril
Colorimetry
Enalapril
Hemorrhage
Isoflurane
Kidney
Nitroprusside
Phlebotomy
Rattus norvegicus
Serum
Urease
Aminopropionitrile
Amlodipine
Aneurysm
Angiotensin-Converting Enzyme Inhibitors
Angiotensin II
Antihypertensive Agents
Aorta
Captopril
Desoxycorticosterone Acetate
Dilatation
High Blood Pressures
Males
Mice, House
Mice, Inbred C57BL
Operative Surgical Procedures
Osmosis
Protein-Lysine 6-Oxidase
The RCSB Protein Data Bank (www.rcsb.org ) was employed to retrieve the 3D-crystal structure of phosphodiesterase 5A1 (PDE5A1) catalytic domain in complex with sildenafil (PDB ID: 2H42), 3D-crystal structure of human angiotensin-converting enzyme (ACE) docked with captopril (PDB ID: 1UZF), 3D-crystal structure of jack bean urease (JBU; PDB ID: 3LA4), and 3D-structure of pGlu (SDF file ID: PCA). PyRx docking software fitted with Autodock VINA (version 0.8, The Scripps Research Institute, La Jolla, CA, USA) was exploited to accomplish the molecular docking studies and to assess the binding modes of pGlu in the active sites of the above-mentioned enzymes.
To ascertain the optimal parameters for reliable docking analyses, sildenafil was extracted from the 3D-crystal structure of (PDB ID: 2H42) and further re-docked back into the crystal structure of the enzyme, while captopril was erased from the 3D-crystal structure of (PDB ID: 1UZF) and re-docked back into the enzyme. All optimal parameters, settings, calculations, protonation conditions, and the overall charges were tracked, as previously designated [28 (link),29 (link)]. Additionally, Zn+2 and Mg+2 ions were assigned during the processing of docking analysis for PDE5A1. All graphical presentations of the docked complexes were illustrated using Discovery studio visualizer version v19.1.0.18287 (BIOVIA, San Diego, CA, USA) [30 ].
To ascertain the optimal parameters for reliable docking analyses, sildenafil was extracted from the 3D-crystal structure of (PDB ID: 2H42) and further re-docked back into the crystal structure of the enzyme, while captopril was erased from the 3D-crystal structure of (PDB ID: 1UZF) and re-docked back into the enzyme. All optimal parameters, settings, calculations, protonation conditions, and the overall charges were tracked, as previously designated [28 (link),29 (link)]. Additionally, Zn+2 and Mg+2 ions were assigned during the processing of docking analysis for PDE5A1. All graphical presentations of the docked complexes were illustrated using Discovery studio visualizer version v19.1.0.18287 (BIOVIA, San Diego, CA, USA) [30 ].
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ACE protein, human
Captopril
Catalytic Domain
Enzymes
Homo sapiens
Hydrolases, Phosphoric Diester
Ions
Sildenafil
Urease
Most recents protocols related to «Captopril»
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Captopril
CCL4 protein, human
Choledochus
Cholestasis
Cytochrome P450
Fibrosis, Liver
Ligation
Losartan
Mus
Phenobarbital
ACE2 activity in tissue lysates was measured using specific fluorogenic ACE2 substrate (Mca-APK-(Dnp) (AnaSpec, San Jose, CA) in the presence or absence of the ACE2 inhibitor (MLN-4760) (Sigma-Aldrich, St. Louis, MO) as previously described [85 (link)]. Tissue samples were homogenized in lysis buffer (75 mM Tris-HCl, pH 7.5, 1 M NaCl, 0.5 mM ZnCl2, 0.01 mM Captopril, 0.1 mM Z-Pro-Prolinal, 1mM PMSF, EDTA-free inhibitor cocktail tablet from Roche, and 0.5% Triton X-100) and centrifuged at 14,000 x g for 10 minutes at 4°C. Protein concentration in tissue lysates was measured using the Bradford method. Tissue lysates (10 μg of protein for kidney extracts and 40 μg of protein for heart, lung, trachea, and sinus extracts) were pre incubated with 70 μL of assay buffer (75 mM Tris-HCl, pH 7.5, 1 M NaCl, 0.5 mM ZnCl2, 0.01 mM Captopril, 0.1 mM Z-Pro-Prolinal, and EDTA-free inhibitor cocktail tablet from Roche) with or without ACE inhibitor MLN-4760 (10 μM final) for 30 minutes at room temperature. After the incubation with ACE2 inhibitor, 30 μL of ACE2 substrate buffer (75 mM Tris-HCl, pH 7.5, 1 M NaCl, 0.5 mM ZnCl2, 0.01 mM Captopril, 0.1 mM Z-Pro-Prolinal, and 0.167 mM Mca-APK-Dpn) was added to each well to initiate the reaction. Samples were incubated in the dark for 1 hour at room temperature, and fluorescence values were measured at an excitation wavelength of 320 nm and emission wavelength of 420 nm using a BioTek Cytation5 plate reader (BioTek instruments, Winooski, VT). Results were expressed as ΔRFU (Relative Fluorescence Unit) after subtraction of RFU values obtained in the presence of MLN-4760. BALF was collected from mice as previously described, and urine was collected during necropsy.
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ACE2 protein, human
Angiotensin-Converting Enzyme Inhibitors
Autopsy
Biological Assay
Buffers
Captopril
Edetic Acid
Fluorescence
Fluorogenic Substrate
Heart
Kidney
Lung
MLN 4760
Mus
N-benzyloxycarbonylprolylprolinal
Proteins
Sinuses, Nasal
Sodium Chloride
Tablet
Tissues
Trachea
Triton X-100
Tromethamine
Urine
The diagnosis of PA was confirmed if patients met the following three criteria: (1) aldosterone-to-renin ratio > 35, (2) a TAIPAI score > 60%, and (3) post-saline loading PAC > 10 ng/dl or aldosterone-to-renin ratio > 35 (ng/dl)/(ng/ml/h) in the post-captopril test; or PAC > 6 ng/dl in the fludrocortisone suppression test. Details of the protocol can be found in our previous study.12 (link)The treatment of PA was either pharmaceutical with mineralocorticoid receptor antagonists or surgical resection with laparoscopic adrenalectomy via a lateral transperitoneal approach performed by experienced operators.
Adrenalectomy
Aldosterone
Captopril
Diagnosis
Fludrocortisone
Mineralocorticoid Receptor Antagonists
Patients
Pharmaceutical Preparations
Renin
Saline Solution
Surgical Procedures, Laparoscopic
The peptides with the highest Peptide Ranker scores IGNNPAKGGLF, with a peptide ranker value of 0.82, and YIGNNPAKGGLF, with a value of 0.81,were selected for synthesis. Once made, peptides were re-tested using in vitro screening assays. ACE-1 activity was tested using an assay kit supplied by Cambridge BioSciences (Cambridge, UK) as described previously. Captopril© (a known ACE-1 inhibitor) dissolved in distilled water was used as a positive control.
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Anabolism
Angiotensin-Converting Enzyme Inhibitors
Biological Assay
Captopril
Peptides
A total of 96 rats were subdivided into 3 groups (n = 32 per group) and subjected to 4 different experimental protocols. The first group contained nondiabetic rats. All hearts isolated from these animals in this group were subdivided into 4 subgroups subjected to acute hyperglycemia which was created by adding 6 g/L to the perfusion buffer. One subgroup (Ctr) was subjected to only I/R and served as control. The second subgroup (Cap) was subjected to I/R and treated with Captopril (100 μM; cat. #:C4042 Sigma-Aldrich (St Louis, MI, USA)). The third subgroup (Los) was subjected to I/R and treated with Losartan (4.5 μM, Santa Cruz Biotechnology). The fourth subgroup (Cap + Los) was subjected to I/R and treated with Losartan (4.5 μM) and Captopril (100 μM). All drugs were injected 5 min before the end of ischemia and continued for 10 min thereafter (Figure 9 ). The second group was subjected to DM for four weeks, then divided into four subgroups, Ctr, Cap, Los, and Los + Cap (Figure 9 ). The third group was subjected to DM for six weeks, then like the previous groups, was subdivided into four similar subgroups (Ctr, Cap, Los, and Cap + Los (Figure 9 ).
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Animals
Buffers
Captopril
Heart
Hyperglycemia
Ischemia
Losartan
Perfusion
Pharmaceutical Preparations
Rattus norvegicus
Top products related to «Captopril»
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Captopril is a laboratory equipment product used in the pharmaceutical industry. It is a peptidase inhibitor that acts as an angiotensin-converting enzyme (ACE) inhibitor. Captopril is used in the development and production of various pharmaceutical drugs.
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Methanol is a clear, colorless, and flammable liquid that is widely used in various industrial and laboratory applications. It serves as a solvent, fuel, and chemical intermediate. Methanol has a simple chemical formula of CH3OH and a boiling point of 64.7°C. It is a versatile compound that is widely used in the production of other chemicals, as well as in the fuel industry.
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The Folin-Ciocalteu reagent is a colorimetric reagent used for the quantitative determination of phenolic compounds. It is a mixture of phosphomolybdic and phosphotungstic acid complexes that undergo a color change when reduced by phenolic compounds.
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Formic acid is a colorless, pungent-smelling liquid chemical compound. It is the simplest carboxylic acid, with the chemical formula HCOOH. Formic acid is widely used in various industrial and laboratory applications.
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Hippuric acid is a chemical compound used as a reference standard in analytical testing. It is a metabolite produced in the human body and is commonly used in analytical laboratories to validate and calibrate instrumentation for the detection and quantification of similar metabolites.
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Losartan is a pharmaceutical compound used as an active ingredient in various prescription medications. It functions as an angiotensin II receptor antagonist, which helps to regulate blood pressure by blocking the action of angiotensin II, a hormone that constricts blood vessels. Losartan is commonly used in the treatment of hypertension and other cardiovascular conditions.
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Hippuryl-L-histidyl-L-leucine is a synthetic peptide compound used as a laboratory standard in various biochemical and analytical applications. It is composed of three amino acids: hippuric acid, histidine, and leucine. This compound can be utilized as a reference material or calibrant in assays and analytical procedures where the detection or quantification of related peptides or amino acids is required.
More about "Captopril"
ACE inhibitor, Hypertension, Congestive heart failure, Diabetes, Angiotensin I, Angiotensin II, Blood pressure, Kidney function, PubCompare.ai, Protocol comparison, Reproducibility, Cardiovascular, Renal, Acetonitrile, DMSO, Methanol, Folin-Ciocalteu reagent, Formic acid, Hippuric acid, Losartan, Gallic acid, Hippuryl-L-histidyl-L-leucine, AI-driven analysis, Research optimization