Immunoglobulins
They play a crucial role in the humoral immune response, binding to antigens and triggering downstream effector functions.
Immunoglobulins are categorized into different isotypes (IgA, IgD, IgE, IgG, IgM) based on their structural and functional properties.
Understanding the biology and applications of immunoglobulins is key for developing effective therapies and diagnostics.
PubCompare.ai's AI-powered tools can help researchers optimize their work with immunoglobulins, easily locating the best protocols and products from the literature with unparalled reproducibility and accurancy.
Most cited protocols related to «Immunoglobulins»
To facilitate exploration of available information on a given target protein, SWISS-MODEL provides cross-links to various other resources and databases. We include links to the RCSB (33 (link)), PDBsum (40 (link)), PDBe (41 (link)), CATH (42 (link)) and SwissDock (43 (link)). In addition, we also provide direct access to a specialised server for antibody modelling. The pre-screening of the target sequence has been extended in order to automatically identify whether an immunoglobulin sequence is present in the input. If a matching sequence signal is detected, data can be sent to the Prediction of Immunoglobulin Structure server PIGSPro (44–46 (link)) where the model of the antibody is generated according to the canonical structure method (47–49 (link)).
Specificity | Fluorophore | Clone | Note |
---|---|---|---|
CD3 | AF488 | UCHT1 | 10uL of antibody used |
CD8 | APC-Cy7 | SK1 | |
CD4 | AF700 | RPA-T4 | |
CD57 | PE | QA17A04 | |
CD56 | APC | 5.1H11 | |
CD103 | BV421 | Ber-ACT8 | |
Integrin 7 | PE | FIB504 | |
CD49a | APC | TS2/7 | BioLegend |
CD43 | PE | CD43-10G7 | BioLegend |
Post sorting, samples were each split into quintuplicates, and then cleaned up with 2x SPRI. Samples were then brought into reverse transcription in an adaptation of SMARTseq2 (Picelli et al., 2014 (link)) and SCRB-seq (Soumillon et al., 2014 (link)) as described here:
The pooled library was sequenced on an Illumina Nextseq (50 R1, 8 index, 34 R2). Post base calling, samples were aligned using a wrapper for DropSeqTools against the human reference hg19 to generate RNA counts matrices.
To assess the agreement between single-cell datasets and bulk-sorted experiments, we examined the top DE genes separating our gated populations in the CITE-seq reference dataset. We next visualized the relative expression of these genes in the heatmaps in
Most recents protocols related to «Immunoglobulins»
Example 14
The ability of anti-PD-L1 antibodies to modulate immune responsiveness was assessed using a mixed lymphocyte reaction (MLR). With this assay, the effects anti-PD-L1 antibodies on cell activation and the production of IL-2 were measured. The MLR was performed by culturing 105 purified human CD4+ cells from one donor with 104 monocyte derived dendritic cells prepared from another donor. To prepare the dendritic cells, purified monocytes were cultured with GM-CSF (1,000 U/ml) and IL-4 (500 U/ml) for seven days. Anti-PD-L1 or control antibodies were added to the allogeneic MLR cultures at 10 μg/ml unless stated otherwise. Parallel plates were set up to allow collection of supernatants at day 3 and at day 5 to measure IL-2 using a commercial ELISA kit (Biolegend). The antibodies used were the disclosed H6B1L, RSA1, RA3, RC5, SH1E2, SH1E4, SH1B11, and SH1C8 as compared to prior disclosed antibodies 10A5 (Bristol-Myers-Squibb/Medarex) and YW243.55S70 (Roche/Genentech) that were obtained via in-house production from prior-disclosed antibody sequences (U.S. Patent Application 2009/0055944 and U.S. Patent Application US 2010/0203056; the disclosure of which are incorporated by reference herein).
Production of IL-2 was enhanced by the addition of the anti-PD-L1 antibodies.
Example 3
Reactivity of the antibodies of the invention against several species of mesothelin (cyno, rat, mouse) was tested using assays well known in the art. The data is summarized in
FACS binding assays were performed to evaluate the binding of the anti-Mesothlelin antibodies to murine, rat and cynomologous monkey mesothelin orthologues, using recombinant forms of the various receptors transiently expressed on 293T cells. FACs assays were performed by incubating hybridoma supernatants with 10,000 to 25,000 cells in PBS/2% Fetal bovine serum/2 mM Calcium Chloride at 4° C. for one hour followed by two washes with PBS/2% Fetal bovine serum/2 mM Calcium Chloride. Cells were then treated with florochrome-labeled secondary antibodies at 4° C. followed by one wash. The cells were resuspended in 50 μl of PBS/2% FBS and antibody binding was analyzed using a FACSCalibur™ instrument.
Example 10
This example provides in vitro IC50 data for the blocking of the interaction between recombinant human PD-1 (PD-1-Fc Chimera; Sino Biologics) and human PD-L1 expressed CHO cells by anti-PD-L1 antibody G12. Here, CHO cells expressing PD-L1 were pre-incubated with G12 prior to the addition of rhPD-1-Fc chimeric protein. After incubation and washing, PD-1 binding to cell surface expressed PD-L1 was detected using an Alexa-Fluor 647 tagged anti-PD-1 antibody by flow cytometry (Intellicyt HTFC; FL-4H). This example shows that anti-PD-L1 monoclonal antibody G12 was able to inhibit efficiently the binding of PD-1 to PD-L1 expressed on the surface of CHO cells.
Results: As shown in
Example 12
As a proof of concept, the patient population of this study is patients that (1) have moderate to severe ulcerative colitis, regardless of extent, and (2) have had an insufficient response to a previous treatment, e.g., a conventional therapy (e.g., 5-ASA, corticosteroid, and/or immunosuppressant) or a FDA-approved treatment. In this placebo-controlled eight-week study, patients are randomized. All patient undergo a colonoscopy at the start of the study (baseline) and at week 8. Patients enrolled in the study are assessed for clinical status of disease by stool frequency, rectal bleeding, abdominal pain, physician's global assessment, and biomarker levels such as fecal calprotectin and hsCRP. The primary endpoint is a shift in endoscopy scores from Baseline to Week 8. Secondary and exploratory endpoints include safety and tolerability, change in rectal bleeding score, change in abdominal pain score, change in stool frequency, change in partial Mayo score, change in Mayo score, proportion of subjects achieving endoscopy remission, proportion of subjects achieving clinical remission, change in histology score, change in biomarkers of disease such as fecal calprotectin and hsCRP, level of adalimumab in the blood/tissue/stool, change in cytokine levels (e.g., TNFα, IL-6) in the blood and tissue.
For example, treatment for a patient that is diagnosed with ulcerative colitis is an ingestible device programmed to release a single bolus of a therapeutic agent, e.g., 40 mg adalimumab, in the cecum or proximal to the cecum. Prior to administration of the treatment, the patient is fasted overnight and is allowed to drink clear fluids. Four hours after swallowing the ingestible device, the patient can resume a normal diet. An ingestible device is swallowed at the same time each day. The ingestible device is not recovered.
In some embodiments, there may be two different ingestible devices: one including an induction dose (first 8 to 12 weeks) and a different ingestible device including a different dose or a different dosing interval.
In some examples, the ingestible device can include a mapping tool, which can be used after 8 to 12 weeks of induction therapy, to assess the response status (e.g., based on one or more of the following: drug level, drug antibody level, biomarker level, and mucosal healing status). Depending on the response status determined by the mapping tool, a subject may continue to receive an induction regimen or maintenance regimen of adalimumab.
In different clinical studies, the patients may be diagnosed with Crohn's disease and the ingestible devices (including adalimumab) can be programmed to release adalimumab in the cecum, or in both the cecum and transverse colon.
In different clinical studies, the patients may be diagnosed with illeocolonic Crohn's disease and the ingestible devices (including adalimumab) can be programmed to release adalimumab in the late jejunum or in the jejunum and transverse colon.
Example 49
The functional activity of compounds was determined in a cell line where p70S6K is constitutively activated. Test article was dissolved in DMSO to make a 10 μM stock. PathScan® Phospho-S6 Ribosomal Protein (Ser235/236) Sandwich ELISA Kit was purchased from Cell Signaling Technology. A549 lung cancer cell line, was purchased from American Type Culture Collection. A549 cells were grown in F-12K Medium supplemented with 10% FBS. 100 μg/mL penicillin and 100 μg/mL streptomycin were added to the culture media. Cultures were maintained at 37° C. in a humidified atmosphere of 5% CO2 and 95% air. 2.0×105 cells were seeded in each well of 12-well tissue culture plates for overnight. Cells were treated with DMSO or test article (starting at 100 μM, 10-dose with 3 fold dilution) for 3 hours. The cells were washed once with ice cold PBS and lysed with 1× cell lysis buffer. Cell lysates were collected and samples were added to the appropriate wells of the ELISA plate. Plate was incubated for overnight at 4° C. 100 μL of reconstituted Phospho-S6 Ribosomal Protein (Ser235/236) Detection Antibody was added to each well and the plate was incubated at 37° C. for 1 hour. Wells were washed and 100 μl of reconstituted HRP-Linked secondary antibody was added to each well. The plate was incubated for 30 minutes at 37° C. Wash procedure was repeated and 100 μL of TMB Substrate was added to each well. The plate was incubated for 10 minutes at 37° C. 100 μL of STOP Solution was added to each well and the absorbance was read at 460 nm using Envision 2104 Multilabel Reader (PerkinElmer, Santa Clara, CA). IC50 curves were plotted and IC50 values were calculated using the GraphPad Prism 4 program based on a sigmoidal dose-response equation.
Unless otherwise noted, compounds that were tested had an IC50 of less than 50 μM in the S6K Binding assay. A=less than 0.05 μM; B=greater than 0.05 μM and less than 0.5 μM; C=greater than 0.5 μM and less than 10 μM;
Top products related to «Immunoglobulins»
More about "Immunoglobulins"
These specialized proteins bind to antigens, triggering downstream effector functions to protect the body from harmful pathogens.
The different immunoglobulin isotypes (IgA, IgD, IgE, IgG, IgM) exhibit unique structural and functional properties, allowing them to perform specialized roles in the immune system.
Understanding the biology and applications of these versatile biomolecules is key for developing effective therapies and diagnostics.
Researchers can leverage PubCompare.ai's AI-powered tools to optimize their work with immunoglobulins.
These advanced solutions can help locate the best protocols and products from the literature, preprints, and patents with unparalleled reproducibility and accuracy.
By harnessing the power of artificial intelligence, scientists can identify the most reliable and effective immunoglobulin techniques, streamlining their research and unlocking new possibilities.
In addition to immunoglobulins, related biomolecules and techniques play a crucial role in immunological research.
PVDF membranes are commonly used for Western blotting to detect and quantify specific proteins, including immunoglobulins.
DAPI, a fluorescent dye, is often employed to stain and visualize cellular nuclei.
Bovine serum albumin (BSA) is a widely used blocking agent in immunoassays to prevent non-specific binding.
RIPA lysis buffer helps extract and solubilize proteins, including immunoglobulins, for further analysis.
Alexa Fluor 488, a fluorescent dye, can be used to label and track immunoglobulins and other proteins of interest.
Triton X-100, a non-ionic detergent, is often utilized to permeabilize cell membranes for intracellular staining of immunoglobulins.
Protease inhibitor cocktails help preserve the integrity of immunoglobulins and other proteins during sample preparation.
Finally, the BCA protein assay kit provides a reliable method for quantifying the concentration of immunoglobulins and other proteins in a sample.
By leveraging the insights and tools provided by PubCompare.ai, researchers can streamline their immunoglobulin-related research, leading to more efficient and accurate results.
This comprehensive understanding of immunoglobulins and related techniques can unlock new discoveries and advancements in the field of immunology and beyond.