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Protein S

Protein S is a vitamin K-dependent plasma glycoprotein that functions as a natural anticoagulant.
It acts as a cofactor for activated protein C, enhancing the inactivation of factors Va and VIIIa, thereby regulating blood coagulation.
Deficiency of Protein S can lead to an increased risk of thrombosis.
Accurate and reproducible research on Protein S is crucial for understanding its role in hemostasis and developing effective therapies.
PubCompare.ai's AI-powered platform can streamline Protein S research by helping scientists easily locate protocols, identify the best products, and achieve more reliable and consistant results.

Most cited protocols related to «Protein S»

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Publication 2019
Amino Acids Amino Acid Sequence Diamond Genome Open Reading Frames Population Group Protein S Viral Genome Virus
A number of factors are expected to determine the number of steps required to purify a protein to sufficient purity and yield: the protein’s abundance in the initial extract, the availability of affinity purification (usually through an extraneous tag), the degree of binding to contaminating proteins, the stability of the protein at different concentrations and buffer conditions, and the difference in chromatographic properties between the target and contaminating proteins. Expression in an efficient recombinant system, testing multiple constructs to optimize soluble expression, and the use of effective affinity tags (His6) resulted in soluble expression levels of 0.5–50 mg protein/L of culture. At these expression levels (especially at levels greater than 2 mg/L), it has been possible to purify the majority of the proteins that were successfully crystallized using a combination of 2–4 chromatographic steps: nucleic acid removal (by precipitation or anion exchange passage at high salt); Ni-affinity purification, and size-exclusion chromatography. Additional purification could be achieved by cleaving the purification tag with TEV protease, followed by passage on a Ni-affinity resin. As elaborated in the results, some proteins required additional purification, typically ion exchange chromatography.
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Publication 2010
A-factor (Streptomyces) Anions Buffers Chromatography Chromatography, Affinity factor A Gel Chromatography Ion-Exchange Chromatographies Nucleic Acids Protein S Proteins Resins, Plant Sodium Chloride Staphylococcal Protein A TEV protease
A total of 15 candidate reference genes were evaluated. These genes were chosen based on their previous use in watermelon or their validation as best reference genes in other crops, including 18S ribosomal RNA (18SrRNA), β-actin (ACT), clathrin adaptor complex subunit (CAC), elongation factor 1-α (EF1α), glyceraldehy-3-phosphate-dehydrogenase (GAPDH), NADP-isocitrate dehydrogenase (IDH), leunig (LUG), protein phosphatase 2A regulatory subunit A (PP2A), polypyrimidine tract-binding protein 1 (PTB), ribosomal protein S (RPS2), SAND family protein (SAND), α-tubulin (TUA), ubiquitin-conjugating enzyme E2 (UBC2), ubiquitin carrier protein (UBCP), and yellow-leaf-specific proein8 (YLS8).
For each candidate reference gene, blastn was carried out in the Cucurbit Genomics Database (http://www.icugi.org) against watermelon coding DNA sequences (CDS) (v1) using Arabidopsis homolog as a query. The CDS of the best hit was retrieved and uploaded to Primer3Plus (http://primer3plus.com/cgi-bin/dev/primer3plus.cgi) for primer design. The product size was set at the range of 80 bp to 150 bp. The forward and reverse primers were intentionally targeted on the adjoining exons, which were separated by an intron. The generated primer pair for each gene was then aligned against all watermelon CDS to confirm its specificity in silico. The specificity of the PCR amplification product for each primer pair was further determined by electrophoresis in 2% agarose gel and melting curve analysis. Finally, the watermelon species name abbreviation of ‘Cl’ was added as a prefix to the specificity-validated gene to specify the watermelon orthologous gene. For more comparable results, the primer pair of 18SrRNA, which was previously published, was used in this study [2] (link). Data on the selected reference genes and their amplification characters are listed in Table 1.
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Publication 2014
Actins Agricultural Crops alpha-Tubulin Arabidopsis Character Clathrin Adaptors EEF1A2 protein, human Electrophoresis Exons Genes Genes, vif Introns Isocitrate Dehydrogenase (NAD+) Isocitrates NADP NADPH Dehydrogenase Oligonucleotide Primers Open Reading Frames Oxidoreductase Phosphates Phosphoric Monoester Hydrolases Plant Leaves Polypyrimidine Tract-Binding Protein PPP2R4 protein, human Protein S Proteins Protein Subunits Ribosomes RNA, Ribosomal, 18S Sepharose Staphylococcal Protein A Ubiquitin-Conjugating Enzymes Watermelon

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Publication 2012
Biofilms Biopharmaceuticals Cell Extracts ChIP-Chip DNA Chips Epitopes Gene Expression Genome Immunoglobulins Immunoprecipitation, Chromatin Microarray Analysis nucleoprotein, Measles virus Oligonucleotide Arrays Protein C Proteins Protein S Strains Transcription, Genetic
Dietary intake was assessed at baseline using validated food frequency questionnaires (FFQ). A slightly different approach was applied to the first two cohorts of the Rotterdam Study (RS-I and RS-II) than to the third cohort (RS-III). For the first two cohorts, an FFQ was applied in a two-stage approach. In the first stage, participants indicated which foods they consumed at least twice a month in the preceding year using a self-administered checklist of 170 food items. In a second stage, a trained dietician used this list to identify how often and in which amounts the foods were consumed. This FFQ was validated against fifteen 24 h food records and four 24 h urinary urea excretion samples in a subsample of the Rotterdam Study (n = 80), which demonstrated that it was able to adequately rank participants according to their intake: Pearson’s correlation for nutrient intakes with the food records ranged between 0.44 and 0.85 and Spearman’s correlation for protein intake against urinary urea was 0.67 [4 (link)]. For the third cohort, a self-administered semi quantitative FFQ was used to assess dietary intake. This FFQ was based on 389 items and was previously validated in two other Dutch populations using a 9-day dietary record [5 (link)] and a 4 week dietary history [6 (link)], which showed Pearson’s correlations for intakes of different nutrients varying from 0.40 to 0.86. For each food item, the frequency of consumption (in times per month or per week), the number of servings per day (expressed in standardized household measures) as well as the preparation methods were included. Information on portion size, type of food item, and preparation method were collected. Nutrient data were calculated from the Dutch Food Composition Table, using 1993’s version for RS-I, the 2001’s version for RS-II, and 2011’s update for RS-III to account for the changes in nutritional composition of foods. We excluded participants who had an unreliable dietary intake according to the trained nutritionist who performed the interview or because their estimated daily energy intake was implausible, for which cut-offs were set at <500 or >5000 kcal/day.
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Publication 2017
Diet Dietitian Food Households Nutrient Intake Nutrients Nutritionist Population Group Protein S Urea Urine

Most recents protocols related to «Protein S»

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Publication 2023
Activated Partial Thromboplastin Time Antithrombin III Continuous Positive Airway Pressure COVID 19 C Reactive Protein Disseminated Intravascular Coagulation Factor VIII Factor VIII-Related Antigen Fibrinogen Hemoglobin Heparin Heparin, Low-Molecular-Weight Index, Body Mass International Normalized Ratio Protein C Protein S SARS-CoV-2 Times, Prothrombin Veins
The binding constant (Kd) was calculated using GraphPad Prism software by fitting the ligand-titration
curve in the binding isotherm equation: S = (rrapo)/(rsatrapo) = [L]/(Kd + [L]), where S is the saturation, [L] is the ligand concentration, r is the ratio, rapo is a ratio in the absence of ligand, and rsat is the ratio at saturation.
Point
mutations were added to the SelFS gene to produce mutants that would
increase the sensor’s physiological detection array. The structure
of SeBP was acquired from the PDB to determine the amino acid residues
present in the protein’s binding pocket that facilitate selenium
binding.22 (link) Using the QuikChange site-directed
mutagenesis kit from Agilent USA, three mutants were produced by replacing
the amino acid residues at positions 29 (isoleucine), 42 (lysine),
and 61 (aspartate) with arginine, tryptophan, and cysteine, respectively.
All these mutants of the SelFS protein were expressed and purified
as described above for further analysis. SelFS was also utilized for in vivo selenium flux measurement investigations.
Publication 2023
Amino Acids Arginine Aspartate Cysteine Genes Isoleucine Ligands Lysine physiology prisma Protein S Proteins Selenium Tryptophan
We used murine Shh (Dierker et al., 2009 (link)) and Hh sequences (nucleotides 1–1416, corresponding to amino acids 1–471 of D. melanogaster Hh) that were generated from cDNA by PCR using primer sequences that can be provided upon request. PCR products were inserted into pENTR for sequence confirmation and subsequently into pUAST for protein expression in S2 cells or the generation of transgenic flies. Mutations were introduced via the QuickChange Lightning site-directed mutagenesis kit (Stratagene, La Jolla, United States). S2 cells were cultured in Schneider’s medium (Invitrogen, Carlsbad, United States) supplemented with 10% fetal calf serum and 100 μg/mL penicillin/streptomycin. The cells were transfected with constructs encoding Hh and Hh variants together with a vector encoding an actin-Gal4 driver using Effectene (Qiagen, Hilden, Germany) and cultured for 36 h in Schneider’s medium before protein was harvested from the supernatant.
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Publication 2023
Actins Amino Acids Animals, Transgenic Cells Cloning Vectors Diptera DNA, Complementary Effectene Fetal Bovine Serum Mus Mutagenesis, Site-Directed Mutation Nucleotides Oligonucleotide Primers Penicillins Proteins Protein S Streptomycin
Cells were divided into the following five groups for western blotting: control group (untreated RAW 264.7 cells), model group (RAW 264.7 cells treated with ox-LDL), and three treatment groups (RAW 264.7 cells treated with ox-LDL and 0.2, 0.6, and 1.8 g/L of GXHP, respectively). Cells were collected, and a protein extraction kit (Gene pool, Beijing, China) was used to extract proteins according to the manufacturer’s protocol. The protein concentration was determined using a BCA protein assay (Multi Sciences, Hangzhou, China). Protein separation using 12% SDS-PAGE gel was then performed, and the protein samples were transferred to a PVDF membrane. After blocking, the PVDF membrane was incubated with specific primary antibodies (Cell Signaling Technology, Danvers, MA, USA), such as PI3 kinase p85 antibody (dilution ratio was 1:500), phospho-PI3 kinase p85 antibody (dilution ratio was 1:1,000), AKT1 antibody (dilution ratio was 1:1500), and phospho-AKT1 antibody (dilution ratio was 1:500), overnight at 4°C. This was followed by 1 hour incubation at room temperature with horseradish peroxidase conjugated goat anti-rabbit IgG (Abcam, Cambridge, MA, USA)(dilution ratio was 1:5000).Antigen–antibody binding was detected using enhanced chemiluminescence reagents (ThermoFisher Scientific, Waltham, MA, USA). Quantification of each protein was determined using Quantity One v.4.6.2.
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Publication 2023
1-Phosphatidylinositol 3-Kinase AKT1 protein, human anti-IgG Antibodies Antigens Biological Assay Cells Chemiluminescence Goat Horseradish Peroxidase Immunoglobulins oxidized low density lipoprotein polyvinylidene fluoride Protein S Proteins Rabbits RAW 264.7 Cells SDS-PAGE Staphylococcal Protein A Technique, Dilution Tissue, Membrane
Venous blood was collected in the early morning after an overnight fast. Plasma was separated and stored at −80°C until processing. Measurements of glucose, total and high-density lipoprotein cholesterol, triglycerides was performed with chemical methods in authomated devices, as previously reported (39 (link)). Low-density lipoprotein level was calculated by the Friedewald formula. Glomerular filtration rate was assessed by duplicate measurements of 24-h creatinine clearance. Coagulation parameters were measured in plasma as previously described (40 (link)). In brief, fibrinogen was assayed in an automatic coagulometer by a functional test, D-dimer was assayed immunoenzymatically, prothrombin fragment 1 + 2 (F1 + 2) and tissue-plasminogen activator (t-PA) by an enzyme-linked immunosorbent assay, plasminogen activator inhibitor-1 (PAI-1) by immunoassay, antithrombin III (ATIII), protein C, protein S, and von Willebrand factor (vWF) by functional chromogenic assays.
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Publication 2023
Alteplase Antithrombin III azo rubin S Biological Assay Coagulation, Blood Creatinine Enzyme-Linked Immunosorbent Assay Factor VIII-Related Antigen fibrin fragment D Fibrinogen Glomerular Filtration Rate Glucose High Density Lipoprotein Cholesterol Immunoassay Low-Density Lipoproteins Medical Devices Plasma Plasminogen Activator Inhibitor 1 Protein C Protein S prothrombin fragment 1.2 Triglycerides Veins

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The Pierce BCA Protein Assay Kit is a colorimetric-based method for the quantification of total protein in a sample. It utilizes the bicinchoninic acid (BCA) reaction, where proteins reduce Cu2+ to Cu+ in an alkaline environment, and the resulting purple-colored reaction is measured spectrophotometrically.
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The BCA Protein Assay Kit is a colorimetric detection and quantification method for total protein concentration. It utilizes bicinchoninic acid (BCA) for the colorimetric detection and quantification of total protein. The assay is based on the reduction of Cu2+ to Cu1+ by protein in an alkaline medium, with the chelation of BCA with the Cu1+ ion resulting in a purple-colored reaction product that exhibits a strong absorbance at 562 nm, which is proportional to the amount of protein present in the sample.
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PVDF membranes are a type of laboratory equipment used for a variety of applications. They are made from polyvinylidene fluoride (PVDF), a durable and chemically resistant material. PVDF membranes are known for their high mechanical strength, thermal stability, and resistance to a wide range of chemicals. They are commonly used in various filtration, separation, and analysis processes in scientific and research settings.
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The BCA protein assay kit is a colorimetric-based method for the quantitative determination of total protein concentration in a sample. It uses bicinchoninic acid (BCA) to detect and quantify the presence of protein.
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The Protease Inhibitor Cocktail is a laboratory product designed to inhibit the activity of proteases, which are enzymes that can degrade proteins. It is a combination of various chemical compounds that work to prevent the breakdown of proteins in biological samples, allowing for more accurate analysis and preservation of protein integrity.
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RIPA lysis buffer is a detergent-based buffer solution designed for the extraction and solubilization of proteins from cells and tissues. It contains a mixture of ionic and non-ionic detergents that disrupt cell membranes and solubilize cellular proteins. The buffer also includes additional components that help to maintain the stability and activity of the extracted proteins.
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The DC Protein Assay is a colorimetric assay for the determination of protein concentration. It is based on the reaction of protein with an alkaline copper tartrate solution and Folin reagent, resulting in the reduction of the Folin reagent by the copper-treated proteins. The color change is measured spectrophotometrically, and the protein concentration is determined by comparison to a standard curve.
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Protease inhibitor cocktail is a laboratory reagent used to inhibit the activity of proteases, which are enzymes that break down proteins. It is commonly used in protein extraction and purification procedures to prevent protein degradation.
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Nitrocellulose membranes are a type of laboratory equipment designed for use in protein detection and analysis techniques. These membranes serve as a support matrix for the immobilization of proteins, enabling various downstream applications such as Western blotting, dot blotting, and immunodetection.
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The Bradford protein assay is a widely used colorimetric method for the quantitative determination of total protein concentration in a sample. It is a simple, rapid, and sensitive technique that measures the absorbance of a protein-dye complex formed between the protein and Coomassie Brilliant Blue G-250 dye.

More about "Protein S"

Protein S is a vital plasma glycoprotein that plays a crucial role in regulating blood coagulation.
It functions as a natural anticoagulant by serving as a cofactor for activated protein C, which helps inactivate factors Va and VIIIa.
Deficiencies in Protein S can lead to an increased risk of thrombosis, highlighting the importance of understanding its role in hemostasis.
Accurate and reproducible research on Protein S is essential for developing effective therapies.
PubCompare.ai's AI-powered platform can streamline this process by helping scientists easily locate protocols from literature, preprints, and patents.
The platform's sophisticated AI-driven comparisons can also assist in identifying the best protocols and products for their needs.
In addition to Protein S research, scientists may also rely on other tools and techniques, such as the Pierce BCA Protein Assay Kit, BCA protein assay kit, PVDF membranes, Protease inhibitor cocktail, RIPA lysis buffer, DC Protein Assay, Nitrocellulose membranes, and Bradford protein assay.
These tools can be used to measure protein concentrations, extract and purify proteins, and analyze protein expression in various biological samples.
By leveraging PubCompare.ai's cutting-edge platform and these complementary tools and techniques, researchers can achieve more reliable and consistent results in their Protein S studies, ultimately contributing to a better understanding of its role in blood coagulation and the development of effective treatments for related disorders.