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Retinoblastoma Protein

Retinoblastoma Protein: A critical cell cycle regulator that plays a key role in suppressing tumor development.
This phosphoprotein binds to and inhibits the activity of E2F transcription factors, thereby controlling the expression of genes essential for cell cycle progression.
Alterations or inactivation of the retinoblastoma protein are frequently observed in a variety of human cancers, making it an important target for cancer research and therapy.
Understand the latest insights on this crucial protein with PubCompare.ai's cutting-edge AI platform, which can help you effortlessly locate relevant protocols and leverage AI-powered comparisons to identify the best approaches for your Retinoblastoma Protein research.

Most cited protocols related to «Retinoblastoma Protein»

We assessed pesticide residues in fruits and vegetables using data from US Department of Agriculture’s Pesticide Data Program, a national program started in 1991 that annually tests agricultural commodities in the USA for the presence of ~ 450 different pesticide residues.22 To best represent the pesticide residues in the food supply, the Pesticide Data Program collects samples from 10 or more participating States comprising 50% of the nation’s population. Before testing, the produce is either washed or peeled to mimic consumer practices, allowing for realistic estimates of exposure. To determine the average pesticide residue status of fruits and vegetables, we developed the PRBS using the Pesticide Data Program annual reports corresponding to the periods in which the diet history of the participants was captured by the FFQ.22 Briefly, we defined PRBS13 (link) according to three contamination measures from the Pesticide Data Program: (1) the percentage of samples tested with any detectable pesticides; (2) the percentage of samples tested with pesticides exceeding tolerance levels; and (3) the percentage of samples with three or more individual detectable pesticides. We ranked the 36 FVs included in the FFQ according to each of the three contamination measures, divided them into tertiles for each of these three measures, and assigned each food a score of 0, 1, and 2 corresponding to the bottom, middle, and top tertile, respectively. The final PRBS for each food was the sum of tertile scores across the three PDP contamination measures (Supplementary Table 1). We classified foods with a PRBS ≥ 4 as high pesticide residue foods and those with a PRBS < 4 as low pesticide residue foods.13 (link) To derive a PRBS specific to a class of pesticides, we used a similar algorithm (i.e., three contamination measures) but restricted Pesticide Data Program data to organophosphates and pyrethroids only for calculating organophosphate-PRBS and pyrethroid-PRBS, respectively. In sensitivity analyses, we also considered an alternate measure, PRBS-weighted fruit and vegetable intake, calculated as the product of each food’s PRBS score (on a scale of 0 to 6) and its intake frequency.
Publication 2017
Diet Food Fruit Hypersensitivity Immune Tolerance Organophosphates Pesticide Residues Pesticides Pyrethroids Retinoblastoma Protein Vegetables
Diet was assessed before initiation of ART using a self-administered, previously validated food frequency questionnaire.29 (link) Women reported how often they typically consumed specified amounts of each food, beverage, and supplement over the past year. Two data-derived dietary pattern scores, the prudent and Western pattern,30 (link) were used to summarize overall food choices.
We used the annual reports from the US Department of Agriculture Pesticide Data Program (PDP) to classify FVs according to their mean pesticide residue status in the US food supply.31 Details of the PRBS methods have been described elsewhere.25 (link),27 (link),32 (link) We considered 3 measures of contamination from the PDP to classify FVs: (1) the percentage of samples tested with any detectable pesticides, (2) the percentage of samples tested with pesticides exceeding the tolerance level, and (3) the percentage of samples with 3 or more individual detectable pesticides. The pesticide residue data in FVs were averaged by annual PDP reports from 2006 through 2015, corresponding to the periods when the diet history of the participants was captured by the food frequency questionnaire.
Next, we categorized foods according to tertiles for each of the 3 measurements of contamination and assigned a score of 0 to FVs in the bottom tertile, 1 to FVs in the middle tertile, and 2 for FVs in the top tertile. The PRBS for each food was the sum of scores across the 3 PDP contamination measures. We considered FVs with a PRBS of 4 or greater on a scale of 0 to 6 to be high–pesticide residue foods while FVs with a PRBS of less than 4 to be low–pesticide residue foods. Based on these criteria, 14 FVs were categorized as high pesticide residue and 22 as low pesticide residue (Table 1).
Statistical Analysis Women were classified according to quartiles of total FV intake, high–pesticide residue FV intake, and low–pesticide residue FV intake. We conducted Kruskal-Wallis tests (for continuous variables) and Fisher exact tests (for categorical variables) to compare baseline characteristics across quartiles of FV intake. To evaluate the relationship of FV intake with ART outcomes, we used cluster-weighted generalized estimating equations to account for within-person correlations in the presence of nonignorable cluster size.33 (link) Each observation was weighted inversely to the number of cycles they contributed to the analysis. We evaluated ART outcomes per initiated cycle to estimate effects relevant in practice and mirror intention-to-treat analyses for studies of ART.34 (link),35 (link) However, in a post-hoc analysis, we evaluated the association of FV intake with risk of pregnancy loss only among cycles in which implantation was achieved.34 (link) Population marginal means were used to present population averages adjusted for the covariates at their average levels for continuous variables and weighted average levels of categorical variables in the model.36 Tests for linear trend were performed using the median intake of FVs in each quartile as a continuous variable.
Confounding was evaluated using directed acyclic graphs based on prior knowledge.
Specifically, variables previously reported to be associated with live birth/pregnancy loss as well as associated with FV intake were considered as potential confounders.37 (link)–40 (link) In addition, we included dietary pattern scores to distinguish relations between FV intake from those of overall food choices. The final multivariable models were adjusted for age (years), BMI, smoking status (current/former vs never), race (white vs nonwhite), supplemental folate intake (micrograms per day), organic FV consumption frequency (<3 vs ≥3 times/wk), residential pesticide exposure history (yes vs no), prudent and Western dietary patterns, total energy intake (kilocalories per day), and infertility diagnosis (male factor vs female factor vs unexplained). The model for high–pesticide residue FV intake was additionally adjusted for low-pesticide FV intake and vice versa because they may confound each other. To minimize residual confounding, we performed separate sensitivity analyses restricting to women younger than 40 years, women without a history of miscarriage, autologous cycles, and cycles initiated within 1 year of food frequency questionnaire completion. We also estimated the effect of substituting 1 serving/d of low–pesticide residue FVs for high–pesticide residue FVs on clinical outcomes.41 (link) All statistical analyses were performed in SAS, version 9.4 (SAS Institute). P values were 2 sided. Findings were considered statistically significant when P < .05.
Publication 2018
Beverages Diagnosis Diet Females Folate Food Hypersensitivity Immune Tolerance Males Ovum Implantation Pesticide Residues Pesticides Pregnancy Retinoblastoma Protein Spontaneous Abortion Sterility, Reproductive Woman Youth

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Publication 2016
Corns Freezing Fruit Immune Tolerance Onions Pesticide Residues Pesticides Retinoblastoma Protein Strawberries Vegetables
As noted above, each participant completed two identification tests, thus generating individual data sets (I and II) for model parameter estimation and validation. To prevent over-fitting and to eliminate potential order-of-presentation effects, a counterbalanced cross-validation approach was implemented: for each participant, data set I was used to estimate model parameters and data set II was used as validation data for the estimated models; then, for the same participant, data set II was used for model estimation and data set I for validation. Thus, for the 11 participants, a total of 22 estimation data sets and 22 validation data sets were obtained.
According to the test protocol (Sect. 5.2, Fig. 4a), an evaluation interval from 290 s to 2085 s was used to estimate and validate model parameters. This interval, within one single PRBS period, was selected, such that the number of samples where the input was high ( v=vm+0.25 m/s) equalled the number of samples where the input was low ( v=vm-0.25 m/s). Here, on the evaluation period from 290 s to 2085 s and with a sample period of 5 s, the total number of samples was N = 360, thus giving 180 low samples and 180 high samples.
To remove any potential drifting Phase III dynamic of the HR response, the mean value and any trend were removed (Matlab “detrend” function) prior to estimation and validation; the mean value of the input signal was also removed. An exemplary data set following this preprocessing procedure is provided (Fig. 1), with raw data are shown above (Fig. 4b).
For each estimation data set, two linear time-invariant transfer functions were employed to model the dynamic response from treadmill speed to HR: a first-order transfer function (Eq. 3) which combined Phases I and II into a single time constant, and a second-order transfer function (Eq. 4) with separate time constants for Phases I and II. Hence, for the 11 participants, a total of 22 first-order models and 22 second-order models were estimated: uy:P1(s)=k1τ1s+1, uy:P2(s)=k2(τ21s+1)(τ22s+1). Here, k1 and k2 are steady-state gains, and τ1 , τ21 , and τ22 are time constants. Model parameters were calculated from the estimation data sets using a least-squares optimisation procedure (“procest” function from the Matlab System Identification Toolbox; The Mathworks, Inc., USA).
After model estimation, the corresponding validation data sets were used to compute goodness-of-fit measures for the resulting first- and second-order models. Two outcome measures were used: the normalised root-mean-square error [denoted fit, Eq. (5)], and the root-mean-square error [denoted RMSE, Eq. (6)], as follows: fit (NRMSE)[%]=1-i=1N(HR(i)-HRsim(i))2i=1N(HR(i)-HR¯)2×100%, RMSE[bpm]=1Ni=1N(HRsim(i)-HR(i))2. Here, HRsim is the simulated HR response obtained using the estimated models and the input signal, and HR is the measured HR from the validation data. HR¯ is the mean value of HR . i is the discrete time index and N is the number of discrete samples considered (as described above, N=360 ). Both of the above outcomes were calculated using the “compare” function from the Matlab System Identification Toolbox.
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Publication 2021
GZMB protein, human Plant Roots Retinoblastoma Protein

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Publication 2014
Adenoviruses Adenovirus Vaccine Adult Animals, Laboratory AT-1012 BRCA1 protein, human Cloning Vectors Cytokeratin 18 Dental Caries Diet Diet, High-Fat Epithelium Fat-Restricted Diet Freezing Infection Institutional Animal Care and Use Committees Large T-Antigen Mice, Laboratory Mice, Obese Microarray Analysis Needles Neoplasms Nitrogen Obesity Ovarian Neoplasm Ovary Oviducts Pituitary Stalk Retinoblastoma Protein RNA, Messenger Serum Simian virus 40 Synovial Bursa Tissues Transgenes Tumor Suppressor Genes Woman

Most recents protocols related to «Retinoblastoma Protein»

Comparisons of demographic (age, gender, and education) and behavioral variables (PRBS scores, CFQ scores, error rate, error in Go and error in No-Go trials in Go-No/Go task) between the groups (i.e., paranormal believers and skeptics) were conducted using the independent two-sample t-test and chi-square tests. EEG absolute power data were analyzed separately for all the bands, the areas, the hemispheres, and the hemispheres/regions using an independent two-sample t-test between two groups (paranormal believers vs. skeptics) with adjusted p-values using the false discovery rate (FDR) method to limit type I error98 . FDR correction was not performed in correlation results due to the exploratory nature of this stage. The effect size for the t-test was calculated using Cohen's d. In addition, we used Pearson’s correlations to explore the relationships between resting-state EEG activities and demographic/behavioral variables in paranormal believers and skeptics. A multiple regression analysis was performed to show the effect of frequency bands (delta, theta, alpha1, alpha2, beta1, beta2, and gamma) as predictors on the measure of the paranormal belief as the criterion. In addition, we used model 4 of the PROCESS macro in SPSS99 to examine whether the effect of paranormal beliefs on inhibitory control (error in No-Go trials in Go/No-Go task) was mediated by frequency bands (delta, theta, alpha, alpha1, alpha2, beta, beta1, beta2, and gamma) in the whole brain (the first mediation model) and frontal lobe (the second mediation model) separately. The statistical significance of the indirect mediation effect on inhibitory control was assessed by bootstrapping (5000 samples) with a 95% confidence interval99 . Statistical analyses were performed using IBM SPSS Statistics version 24 (IBM Inc., New York, USA), and MATLAB 2021a (MathWorks, Natick, Massachusetts), and p-values less than 0.05 were considered statistically significant.
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Publication 2023
Brain Gamma Rays Gender Lobe, Frontal Psychological Inhibition Retinoblastoma Protein
To investigate the potential interaction of the screened compounds with HRAS, KRAS, and RB1 proteins, molecular docking was carried out. The structure of proteins was retrieved from PDB (HRAS: 2CE2, KRAS: 6TAN, RB1: 2R7G). Then, the structures were cleaned and energy minimized using Chimera. Finally, the binding affinities were measured using PyRx and the interactions were analyzed using Pymol [47 ].
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Publication 2023
Chimera HRAS protein, human K-ras Genes Proteins Retinoblastoma Protein

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Publication 2023
CASP8 protein, human Continuous Wave Lasers Pulse Rate Retinoblastoma Protein Vision

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Publication 2023
CASP8 protein, human Electricity PIAS1 protein, human Pulse Rate Pulses Retinoblastoma Protein Transmission, Communicable Disease Vision
Statistical analysis was performed using GraphPad Prism 5 (GraphPad Software, Inc., San Diego, California, US, https://www.graphpad.com/) and SPSS 16.0 (SPSS Inc., IL, USA, https://www.ibm.com/cn-zh/spss), and a t test was used to determine the significance fo differences between two independent samples. One-way ANOVA was used to analyse the significance of differences between three or more independent samples. Analysis of the relationship between CENPF expression and neoadjuvant chemotherapy grade and clinicopathological parameters was performed using the chi-square test and Fisher's exact test. We used the Kaplan‒Meier method and log-rank t test to determine the significance of differences in survival curves. Correlation analysis between coexpressed genes in the TCGA dataset in breast cancer was performed using Pearson's correlation coefficient; immunofluorescence colocalization of CENPF and Rb proteins analysed using Pearson's correlation coefficient, R values > 0.3 or < -0.3 were considered to indicate statistical significance. Each experiment was repeated at least 3 times, and P < 0.05 was considered to indicate statistical significance.
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Publication 2023
CENPF protein, human Genes Immunofluorescence Malignant Neoplasm of Breast Neoadjuvant Chemotherapy neuro-oncological ventral antigen 2, human prisma Retinoblastoma Protein

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More about "Retinoblastoma Protein"

Retinoblastoma Protein (RB), a crucial cell cycle regulator, plays a pivotal role in suppressing tumor development.
This phosphoprotein binds to and inhibits the activity of E2F transcription factors, thereby controlling the expression of genes essential for cell cycle progression.
Alterations or inactivation of the retinoblastoma protein are frequently observed in a variety of human cancers, making it an important target for cancer research and therapy.
To optimize your Retinoblastoma Protein (RB) research, PubCompare.ai's cutting-edge AI platform can help you effortlessly locate relevant protocols from the literature, preprints, and patents.
Leverage AI-powered comparisons to identify the best approaches, streamlining your research process and uncovering valuable insights.
Explore related terms and techniques, such as Propidium iodide (PI), a fluorescent dye used to stain DNA and assess cell cycle progression, and BenchMark XT, an automated immunohistochemistry (IHC) system.
Incorporate radioactive [γ-32P]ATP to study protein phosphorylation, and utilize antibiotics like Penicillin and Streptomycin to maintain cell culture conditions.
Measure expression levels with β-actin as a loading control, and supplement your cell culture media with Fetal Bovine Serum (FBS) to support cell growth.
Analyze your data using GraphPad Prism 5, a powerful statistical software, and maintain your cell lines in M199 medium supplemented with DMSO as a solvent.
Stay ahead of the curve in Retinoblastoma Protein (RB) research with PubCompare.ai's AI-driven platform, where you can effortlessly access the latest protocols, compare methodologies, and uncover groundbreaking insights to accelerate your discoveries.