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Phospholipids

Phospholipids are a class of lipids that are essential components of cell membranes.
They consist of a glycerol backbone, two fatty acid chains, and a phosphate-containing headgroup.
Phospholipids play crucial roles in maintaining cell structure, signaling, and various physiological processes.
Researchers can utilize PubCompare.ai's AI-driven platform to optimize research protocols for phospholipids, improving reproducibility and accuracy.
The platform can help locate the best protocols from litreature, pre-prints, and patents through intelligent comparisons, ensuring your research is powered by the most reliable and effective methods.

Most cited protocols related to «Phospholipids»

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Publication 2014
Buffers Cells Chloroform derivatives Esters Fatty Acids Gas Chromatography Methanol methoxyamine hydrochloride N,N'-monomethylenebis(pyridiniumaldoxime) dichloride Nonesterified Fatty Acids Parent Phospholipids pyridine TERT protein, human
It was our objective to unravel and to validate laboratory biomarkers significantly associated with disease phenotypes and risks. An extensive panel of laboratory tests covering 83 analytes and biomarkers (clinical chemistry, hematology, immunology, endocrinology and metabolism) was performed on fresh biospecimen directly on the day of sample collection in a highly standardized manner (Table 4). It is a major goal to investigate and to identify novel genetic modifiers of phenotypes and disease risk. To this end, we aimed to genotype all participants using the Affymetrix AXIOM-CEU genome-wide SNP array, addressing a total of 587,352 variants. Genotyping was accompanied by genome-wide gene expression analyses for the whole blood, which was collected in Tempus Blood RNA Tubes (Life Technologies) and transferred to -80 °C prior to further processing. Isolated RNA was processed and hybridised to Illumina HT-12 v4 Expression BeadChips (Illumina, San Diego, CA, USA) and scanned on the Illumina HiScan. We investigated the association of metabolic biomarkers (quantitiative tandem mass spectrometry: amino acidy, fatty acid oxidation, steroids, sterols, eicosanoids, phospholipids, tri- and diacylglycerols, apolipoproteins and others) with major disease phenotypes, the genome and other biomarkers. For the whole blood analysis of 26 amino acids, free carnitine and 34 acylcarnitines, 40 μl of native EDTA whole blood were spotted on filter paper WS 903 (GE Healthcare, Germany). Dried blood spots were stored at -80 °C after 3 h of drying until batch analysis. Sample pretreatment and measurement are described in detail elsewhere [74 (link), 75 (link)]. Analyses were performed on an API 2000 and API 4000 tandem mass spectrometer (Applied Biosystems, Germany). Quantification was performed using ChemoView™ 1.4.2 software (Applied Biosystems, Germany).
In a subcohort of over 900 participants comprising all age groups, a detailed leukocyte subtype phenotyping with an extensive antibody panel was performed from EDTA whole blood samples using 10 colour flow cytometry (Navios flow cytometer, Beckman Coulter, Pasadena, CA, USA) [76 (link), 77 ].
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Publication 2015
acylcarnitine Age Groups Amino Acids Apolipoproteins Biological Markers BLOOD Carnitine Diglycerides Edetic Acid Eicosanoids Exanthema Fatty Acids Flow Cytometry Gene Expression Profiling Genes, Modifier Genome Hematologic Tests Immunoglobulins Leukocytes Metabolism Phospholipids Radionuclide Imaging Specimen Collection Steroids Sterols System, Endocrine Tandem Mass Spectrometry
Endogenous lipids from mouse liver and heart were detected and quantified using several techniques. FC was quantified using straight-phase HPLC and ELS detection as previously described10 (link). Quantification was made against an external calibration curve. This chromatographic set-up was also used to fractionate DG. Quantification of CE, TG, SM, and phospholipids (all from the total extract) and DG (fractionated from the HPLC) was made by direct infusion (shotgun) on a QTRAP 5500 mass spectrometer (Sciex, Concord, Canada) equipped with a robotic nanoflow ion source, TriVersa NanoMate (Advion BioSciences, Ithaca, NJ)11 (link). For this analysis, total lipid extracts, stored in chloroform:methanol (2:1), were diluted with internal standard-containing chloroform/methanol (1:2) with 5mM ammonium acetate and then infused directly into the mass spectrometer. The characteristic dehydrocholesterol fragment m/z 369.3 was selected for precursor ion scanning of CE in positive ion mode12 (link). The analysis of TG and DG was performed in positive ion mode by neutral loss detection of 10 common acyl fragments formed during collision induced dissociation13 (link). The PC, LPC and SM were detected using precursor ion scanning of m/z 184.114 (link), while the PE, phosphatidylserine (PS), phosphatidylglycerol (PG) and phosphatidylinositol (PI) lipid classes were detected using neutral loss of m/z 141.0, m/z 185.0, m/z 189.0 and m/z 277.0 respectively15 (link)16 (link). For quantification, lipid class-specific internal standards were used. The internal standards were either deuterated or contained diheptadecanoyl (C17:0) fatty acids.
Ceramides (CER), dihydroceramides (DiCER), glucosylceramides (GlcCER) and lactosylceramides (LacCER) were quantified using a QTRAP 5500 mass spectrometer equipped with a Rheos Allegro quaternary ultra-performance pump (Flux Instruments, Basel, Switzerland). Before analysis the total extract was exposed to alkaline hydrolysis (0.1M potassium hydroxide in methanol) to remove phospholipids that could potentially cause ion suppression effects. After hydrolysis the samples were reconstituted in chloroform:methanol:water [3:6:2] and analyzed as previously described17 (link).
For the recovery experiments the tissue samples were spiked with non-endogenously present lipids (or endogenous lipids spiked at relatively high levels) and could therefore all be detected by lipid class specific scans using the shotgun approach. In the recovery experiment we therefore also included the PA and phosphatidylcholine plasmalogen (PC P) lipid class, which we could not measure endogenously using our current analytical platform. Due to poor ionization efficiency, FC was derivatized and analyzed as picolinyl esters according to previous publication18 (link). See Table 1 for details. With some exceptions, lipids are annotated according to Liebisch et al.19 (link).
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Publication 2016
Allegro ammonium acetate Ceramides Chloroform Chromatography Dehydrocholesterols dihydroceramide Esters Fatty Acids Glucosylceramides Heart High-Performance Liquid Chromatographies Hydrolysis Lactosylceramides Lipids Liver Methanol Mice, House Phosphatidylcholines Phosphatidyl Glycerol Phosphatidylinositols Phosphatidylserines Phospholipids Plasmalogens potassium hydroxide Radionuclide Imaging Tissues

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Publication 2010
11-cis-Retinal Biological Assay Bos taurus Cells Chromatography, Affinity Dithionite Fatty Acids Fluorescence Glycolipids Homo sapiens Lipids Mannose Membrane Proteins Monoclonal Antibodies Phospholipids proteoliposomes Rhodopsin Rod Cell Outer Segment Rod Opsins SDS-PAGE Serum Albumin Triton X-100
A detailed description of the experimental and computational methods
used in this study is provided in the Supporting Information. Briefly, a lipidomics-based LC/MS assay was used
to define the specificity of cPLA2, iPLA2, and
sPLA2 toward a variety of phospholipids. Molecular dynamics-based
binding computations were employed to determine the structural features
of each enzyme that contribute to its specificity.
Publication 2018
Biological Assay Calcium-Independent Phospholipase A2 Enzymes Phospholipids

Most recents protocols related to «Phospholipids»

Example 8

To evaluate which lipid composition within the dendrimer nanoparticles lead to improved siRNA delivery, the identity and concentration of different phospholipids and PEG-lipids were varied. Three different cell lines (HeLa-Luc, A549-Luc, and MDA-MB231-Luc) were used. The cells were present at 10K cells per well and a 24 hour incubation. The readout was determined 24 hours post transfection. In the nanoparticles, DSPC and DOPE were used as phospholipids and PEG-DSPE, PEG-DMG, and PEG-DHD were used as PEG-lipids. The compositions contain a lipid or dendrimer:cholesterol:phospholipid:PEG-lipid mole ratio of 50:38:10:2. The mole ratio of lipid/dendrimer to siRNA was 100:1 with 100 ng dose being used. The RiboGreen, Cell-titer Fluor, and OneGlo assays were used to determine the effectiveness of these compositions. Results show the relative luciferase activity in HeLa-Luc cells (FIG. 17A), A549-Luc (FIG. 17B), and MDA-MB231-Luc (FIG. 17C). The six formulations used in the studies include: dendrimer (lipid)+cholesterol+DSPC+PEG-DSPE (formulation 1), dendrimer (lipid)+cholesterol+DOPE+PEG-DSPE (formulation 2), dendrimer (lipid)+cholesterol+DSPC+PEG-DMG (formulation 3), dendrimer (lipid)+cholesterol+DOPE+PEG-DMG (formulation 4), dendrimer (lipid)+cholesterol+DSPC+PEG-DSPE (formulation 5), and dendrimer (lipid)+cholesterol+DOPE+PEG-DHD (formulation 6).

Further experiments were run to determine which phospholipids showed the increased delivery of siRNA molecules. A HeLa-Luc cell line was used with 10K cells per well, 24 hour incubation, and readout 24 hours post transfections. The compositions contained either DOPE or DOPC as the phospholipid with PEG-DHD as the PEG-lipid. The ratio of lipid (or dendrimer):cholesterol:phospholipid:PEG-lipid was 50:38:10:2 in a mole ratio with the mole ratio of dendrimer (or lipid) to siRNA of 200:1. These compositions was tested at a 50 ng dose using the Cell-titer Fluor and OneGlo assays. These results are shown in FIGS. 18A & 18B.

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Patent 2024
1,2-oleoylphosphatidylcholine Biological Assay Cell Lines Cells Cholesterol Dendrimers Figs HeLa Cells Lipid Nanoparticles Lipids Luciferases Nevus Obstetric Delivery Phospholipids polyethylene glycol-distearoylphosphatidylethanolamine RNA, Small Interfering Transfection

Example 1

As a general procedure, shikonin or a composition comprising shikonin or a derivative thereof is formulated in capsules, optionally in combination with lecithin (phospholipids, comprising primarily phosphatidylcholine) (e.g., at a shikonin-to-lecithin weight ratio of about 1:1). The shikonin or derivative thereof may be substantially pure (from a synthetic or natural source) or a part of an extract of a plant, such as Lithospermum erythrorhizon, Arnebia euchroma or another member of the borage family.

Using the above general procedure, an extract of purple gromwell (Lithospermum erythrorhizon) root (zicao) was prepared using an appropriate solvent, followed by spray drying and sieving, to obtain a purple powder. 175 mg of the powdered purple gromwell extract, containing about 30% shikonin and/or derivatives thereof, was placed with an equal weight of lecithin (Lipoid® PS P 20×, obtained from Lipoid GmbH) in Capsugel® delayed release (DR) capsules.

As an alternative to capsules, a syrup was prepared comprising lecithin and shikonin (95% purity) at a 5:1 lecithin:shikonin ratio, 44% alcohol as solvent, and honey.

Based on literature reports, toxicity of shikonin is not expected at dosages of less than 8 grams per day.

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Patent 2024
Arnebia Borago Capsule Coronavirus Infections derivatives Ethanol Family Member Honey Lecithin Lithospermum Phospholipids Plant Extracts Plant Roots shikonin Solvents
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Example 2

Anti-angiogenesis treatment with integrin-targeted doxorubicin prodrug and paclitaxel prodrug PFC nanoparticles was demonstrated using an in vivo Matrigel plug model in rats. The therapeutic response was assessed using MRI neovascular mapping at 3 T with αvβ3 integrin-targeted paramagnetic PFC nanoparticles (FIG. 3). Angiogenesis was decreased by both treatment formulations relative to control. Similar results were obtained in vivo with the Vx2 tumor model in rabbits using paclitaxel prodrug (FIG. 4). Therefore, in contradistinction to prior research that showed loss of paclitaxel or doxorubicin during in vitro dissolution, the phospholipid prodrug forms were retained in circulation, delivered to the target cell, released enzymatically and exerted the intended antiproliferative effects.

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Patent 2024
angiogen Cells Doxorubicin Integrins matrigel Neoplasms Oryctolagus cuniculus Paclitaxel Pathologic Neovascularization Phospholipids Prodrugs Rattus
Not available on PMC !

Example 16

Direct analysis of chemicals in animal tissue using probes of the invention was performed as shown in FIG. 29A. A small sections of tissue were removed and placed on a paper triangle. Methanol/water (1:1 v:v; 10 μl) was added to the paper as solvent and then 4.5 kV positive DC voltage was applied to produce the spray for MS analysis. Protonated hormone ions were observed for porcine adrenal gland tissue (1 mm3, FIG. 29B). FIG. 16 is a mass spectrum showing direct analysis of hormones in animal tissue by paper spray. A small piece of pig adrenal gland tissue (1 mm×1 mm×1 mm) was placed onto the paper surface, MeOH/water (1:1 v:v; 10 μl) was added and a voltage applied to the paper to produce a spray. The hormones epinephrine and norepinephrine were identified in the spectrum; at high mass the spectrum was dominated by phospolipid signals.

Lipid profiles were obtained for human prostate tissues (1 mm2×15 μm, FIGS. 29C and 29D) removed from the tumor and adjacent normal regions. Phospholipids such as phosphatidylcholine (PC) and sphingomyelin (SM) were identified in the spectra. The peak of [PC(34:1)+K]+ at m/z 798 was significantly more intense in tumor tissue (FIG. 29C) and peaks [SM(34:1)+Na]+ at m/z 725, [SM(36:0)+Na]+ at m/z 756, and [SM(36:4)+Na]+ at m/z 804 were significantly lower compared with normal tissue (FIG. 29D).

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Patent 2024
Adrenal Glands Animals Epinephrine Homo sapiens Hormones Ions Lipids Mass Spectrometry Methanol Neoplasms Norepinephrine Phosphatidylcholines Phospholipids Pigs Prostate Solvents Sphingomyelins Tissues

Example 13

Systems and methods of the invention were used to analyze human prostate tumor tissue and normal tissue. Tumor and adjacent normal tissue sections were 15 μm thick and fixed onto a glass slide for an imaging study using desorption electrospray ionization (DESI). A metal needle was used to remove a 1 mm2×15 μm volume of tissue from the glass slide from the tumor region and then from the normal region and place them onto the surface of the paper triangle for paper spray analysis.

A droplet of methanol/water (1:1 v:v; 10 μl) was added to the paper as solvent and then 4.5 kV positive DC voltage applied to produce the spray. Phospholipids such as phosphatidylcholine (PC) and sphingomyelin (SM) were identified in the spectrum (FIG. 17A-17B). The peak of [PC(34:1)+K]+ at m/z 798 was significantly higher in tumor tissue and peaks [SM(34:1)+Na]+ at m/z 725, [SM(36:0)+Na]+ at m/z 756, and [SM(36:4)+Na]+ at m/z 804 were significantly lower compared with normal tissue.

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Patent 2024
Homo sapiens Metals Methanol Needles Neoplasms Phosphatidylcholines Phospholipids Prostatic Neoplasms Solvents Sphingomyelins Tissues

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Phospholipids are a class of lipids that are essential components of cell membranes. They are composed of a glycerol backbone, two fatty acid chains, and a phosphate group. Phospholipids play a crucial role in maintaining the structural integrity and permeability of cell membranes, allowing for the transport of various molecules in and out of the cell.
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Cholesterol is a lab equipment product that measures the concentration of cholesterol in a given sample. It provides quantitative analysis of total cholesterol, HDL cholesterol, and LDL cholesterol levels.
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Chloroform is a colorless, volatile liquid with a characteristic sweet odor. It is a commonly used solvent in a variety of laboratory applications, including extraction, purification, and sample preparation processes. Chloroform has a high density and is immiscible with water, making it a useful solvent for a range of organic compounds.
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The Zetasizer Nano ZS is a dynamic light scattering (DLS) instrument designed to measure the size and zeta potential of particles and molecules in a sample. The instrument uses laser light to measure the Brownian motion of the particles, which is then used to calculate their size and zeta potential.
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1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine is a phospholipid consisting of a glycerol backbone with a palmitic acid and an oleic acid esterified to the first and second carbons, respectively, and a phosphocholine group attached to the third carbon. This compound is a commonly used lipid in various biochemical and biophysical applications.
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Fetal Bovine Serum (FBS) is a cell culture supplement derived from the blood of bovine fetuses. FBS provides a source of proteins, growth factors, and other components that support the growth and maintenance of various cell types in in vitro cell culture applications.
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Methanol is a clear, colorless, and flammable liquid that is widely used in various industrial and laboratory applications. It serves as a solvent, fuel, and chemical intermediate. Methanol has a simple chemical formula of CH3OH and a boiling point of 64.7°C. It is a versatile compound that is widely used in the production of other chemicals, as well as in the fuel industry.
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SonoVue is a contrast agent used in ultrasound imaging. It consists of microbubbles that enhance the visibility of blood flow during the ultrasound procedure.
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The FACSCalibur is a flow cytometry system designed for multi-parameter analysis of cells and other particles. It features a blue (488 nm) and a red (635 nm) laser for excitation of fluorescent dyes. The instrument is capable of detecting forward scatter, side scatter, and up to four fluorescent parameters simultaneously.

More about "Phospholipids"

Phospholipids are a diverse class of lipids that are essential building blocks of cell membranes.
These amphipathic molecules consist of a glycerol backbone, two fatty acid chains, and a phosphate-containing headgroup.
Phospholipids play crucial roles in maintaining cell structure, signal transduction, and various physiological processes.
Researchers can leverage PubCompare.ai's cutting-edge AI-driven platform to optimize their research protocols for phospholipids, improving reproducibility and accuracy.
The platform can help locate the best protocols from literature, preprints, and patents through intelligent comparisons, ensuring your research is powered by the most reliable and effective methods.
Beyond phospholipids, the platform can also assist with research involving related lipids like cholesterol, which is another important component of cell membranes.
Additionally, techniques like mini-extruders, chloroform extraction, and zetasizer nano analysis can be employed to study the physical properties and behavior of phospholipids.
Specific phospholipids, such as 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), are commonly used in liposome and nanoparticle formulations.
These can be further combined with cell culture media (e.g., FBS) and solvents like methanol to create complex experimental systems.
Cutting-edge imaging and analytical tools, such as the FACSCalibur flow cytometer and SonoVue ultrasound contrast agent, can provide valuable insights into the dynamics and interactions of phospholipids in biological systems.
By leveraging these technologies and the AI-powered optimization capabilities of PubCompare.ai, researchers can unlock new frontiers in the study and application of these essential lipid molecules.