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Example 10
Binding of MSLN-BiTE to membrane-bound target expressed in cells was determined with an on-cell affinity assay. 3×104 cells per well of a microtiter plate were incubated with MSLN-BiTE protein in a dose response for 16-22 h at 4° C. Cells were washed twice with flow buffer (PBS that contained 2% fetal calf serum and 0.01% sodium azide), and then resuspended in flow buffer and incubated with an anti-His Fab labeled with Alexa Fluor-647 for 50 minutes at 4° C. Cells were fixed after incubation to optimize detection of the fluorescent signal. Cells were then washed twice and resuspended in flow buffer that contained propidium iodide at 1 ug/ml. Cells were analyzed by flow cytometry for live cells that were positive for Alexa Fluor-647. EC50 values were determined from the dose response curve of Alexa Fluor-647 positive cells.
Example 10
0.39 g of 1-benzoyl-3-(5′-p-toluenesulfonyl-1′-pentyl)pyrrolidine (13) was dissolved in 4 ml of N,N-dimethyl formamide (DMF), and then 0.15 g of sodium azide was added, heated to 70° C. and reacted overnight. After concentration under reduced pressure, 10 ml of dichloromethane was added, and washed sequentially with water and a saturated sodium chloride solution. The reaction solution was concentrated under reduced pressure, and separated by column chromatography (EA/PE vol/vol=1:4-1:1, gradient elution), to obtain 0.24 g of an oily product 1-benzoyl-3-(5′-azido-1′-pentyl)pyrrolidine (14).
Example 90
To a solution of tert-butyl 3-(2-(2-(2-(tosyloxy)ethoxy)ethoxy)ethoxy) propanoate (39.4 g, 91.1 mmol, 1.0 eq.) in anhydrous DMF (100 mL) was added NaN3 (20.67 g, 316.6 mmol, 3.5 eq.). The mixture was stirred at room temperature overnight. Water (500 mL) was added and extracted with EtOAc (3×300 mL). The combined organic layers were washed with water (3×900 mL) and brine (900 mL), dried over anhydrous Na2SO4, filtered, concentrated and purified by SiO2 column chromatography (5:1 hexanes/EtOAc) to give a light yellow oil (23.8 g, 85.53% yield). MS ESI m/z calcd for C13H25O3N5Na [M+Na]+ 326.2, found 326.2.
Example 8
This example provides an alternative in vitro activity assay for SGSH-Fc fusion proteins. The assay is adapted from Karpova et al., J. Inherit. Metab. Dis., 19:278-285 (1996).
The standard reaction mixtures consisted of 10-15 μg of protein and 20 μL MU-α-GlcNS (5 or 10 mmol/L, respectively) in Michaelis' barbital sodium acetate buffer, pH 6.5 (29 mmol/L sodium barbital, 29 mmol/L sodium acetate, 0.68% (w/v) NaCl, 0.02% (w/v) sodium azide; adjusted to pH 6.5 with HCl) and the reaction mixtures were incubated for 17 h at 37° C. MU-α-GcNS is available from Moscerdam Substrates. After the first incubation, 6 μl twice-concentrated McIlvain's phosphate/citrate buffer, pH 6.7, containing 0.02% sodium azide and 10 μl (0.1 U) yeast a-glucosidase (Sigma) in water were added and a second incubation of 24 h at 37° C. was carried out. Long incubations at 37° C. (17-24 h) were carried out in 96-well plates which were sealed airtight with broad sticky tape, limiting evaporation to <15%. Next, 200 μL 0.5 mol/L Na2CO3/NaHCO3, pH 10.7, was added, and the fluorescence of the released 4-methylumbelliferone (MU) was measured on a Fluoroskan (Titertek) fluorimeter. Protein was determined as described previously (van Diggelen et al., Clin. Chim. Acta., 187:131-139 (1990)).
Example 217
To a solution of Compound 265 (25 mg, 63.8 umol, 1 eq) in DMF (1 mL) at 30° C. was added NaN3 (5.0 mg, 76.6 umol, 1.2 eq). The resulting mixture was stirred at 60° C. for 6 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mL*3). The combined organic layers were washed with brine (20 mL), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue (containing some DMF). The residue was purified by prep-HPLC (column: Waters Xbridge 150*50 10u; mobile phase: [water (0.05% ammonia hydroxide v/v)-ACN]; B %: 59%-89%, 10 min) to give Compound 256 (15.8 mg, 39.7 umol, 62.3% yield) as a white solid. LCMS (ESI): RT=0.898 min, mass calc. for C21H17F3N4O 398.14, m/z found 399.0 [M+H]+; 1H NMR (400 MHz, CDCl3) δ 8.38 (d, J=1.8 Hz, 1H), 8.00 (d, J=8.3 Hz, 1H), 7.91-7.85 (m, 1H), 7.78 (d, J=7.5 Hz, 3H), 7.65-7.58 (m, 3H), 7.52 (dd, J=1.1, 7.2 Hz, 1H), 6.55 (brs, 1H), 3.64 (q, J=6.5 Hz, 2H), 3.51 (t, J=6.5 Hz, 2H), 1.98 (quin, J=6.5 Hz, 2H).