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Anthracene

Anthracene is a polycyclic aromatic hydrocarbon compound found in coal tar and certain plant and animal tissues.
It is used in the production of dyes, plastics, and other chemicals.
Researching Anthracene can provide insights into its potential applications and properties.
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Most cited protocols related to «Anthracene»

In this work, we used as authentic nitro-PAH standards a NIST SRM 2265 (polycyclic aromatic hydrocarbons nitrated in methylene chloride II), which contained 2-nitrofluoranthene (2-NFLT, CAS# 13177-29-2), 3-nitrofluoranthene (3-NFL, CAS# 892-21-7), 1-nitropyrene (1-NPYR, CAS# 5522-43-0), 2-nitropyrene (2-NPYR, CAS# 789-07-1), and 3-nitrobenzanthrone (3-NBA, CAS# 17117-34-9), among others. Their certified concentrations were 5.46 ± 0.15 µg mL−1 (2-NFLT), 6.14 ± 0.13 µg mL−1 (3-NFLT), 6.91 ± 0.27 µg mL−1 (1-NPYR), 6.91 ± 0.27 µg mL−1 (2-NPYR), and 4.39 ± 0.11 µg mL−1 (3-NBA). Since SRM 2265 does not include 2-nitrobenzanthrone (2-NBA, CAS# 111326-48-8), this compound was purchased from Sigma-Aldrich (USA) (>99% purity) and added to that. Authentic standards for fluoranthene (FLT, CAS# 206-44-0), pyrene (PYR, CAS# 129-00-0), benzo[a]pyrene (BaP, CAS# 50-32-8), and benzo[a]anthracene (BaA, CAS# 56-55-3), among others, are included in the EPA 610 PAH mix, at 2000 µg mL−1 each, in methanol: methylene chloride (1:1) (Supelco, USA). In this study, stock and analytical solutions were prepared by successive dilutions in acetonitrile (chromatographic and spectroscopic grade, J.T. Baker, USA).
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Publication 2019
1-nitropyrene 2-nitrobenzanthrone 2-nitrofluoranthene 2-nitropyrene 3-nitrobenzanthrone 3-nitrofluoranthene acetonitrile anthracene Benzo(a)pyrene Chromatography fluoranthene Methanol Methylene Chloride Polycyclic Hydrocarbons, Aromatic pyrene Spectrum Analysis Technique, Dilution
Study population. We conducted a population-based case–control study of NHL in four National Cancer Institute–Surveillance Epidemiology and End Results Program (NCI-SEER) study sites (http://seer.cancer.gov/). The study design has been previously described (Colt et al. 2004 (link); Wheeler et al. 2011 (link)). Briefly, the study was conducted in Iowa, Los Angeles County, California, and the metropolitan areas of Detroit, Michigan (Macomb, Oakland, and Wayne counties) and Seattle, Washington (King and Snohomish counties). Eligible cases were 20–74 years of age, diagnosed with a first primary NHL between July 1998 and June 2000, and uninfected with HIV. In Seattle and Iowa, all consecutive cases were chosen. In Detroit and Los Angeles, all African-American cases and a random sample of white (regardless of Hispanic ethnicity) cases were eligible for study, allowing for oversampling of African-American cases. Of the 2,248 potentially eligible cases, 320 (14%) died before they could be interviewed, 127 (6%) were not located, 16 (1%) had moved away, and 57 (3%) had physician refusals. Of the 1,728 remaining cases, 1,321 (76%) participated. Controls (≥ 65 years of age) were selected from Center for Medicare and Medicaid Services files (http://dnav.cms.gov/) or the general population using random digit dialing (< 65 years of age) and were frequency matched to cases by sex, age (within 5-year groups), race, and study site. Of the 2,409 potentially eligible controls, 2,046 were able to be located and contacted, and 1,057 (52%) of these subjects participated. The study was approved by the human subjects review boards at all participating institutions. Written informed consent was obtained from each participant.
Computer-assisted personal interviews were conducted in the home of each participant. Interviewers asked about demographics including race and education, age of the home, housing type, the presence of oriental rugs, pesticide use in the home and garden, residential and occupational histories, and other factors.
Dust samples and laboratory analysis. As described in detail previously (Colt et al. 2004 (link), 2005 (link)), dust was collected between February 1999 and May 2001 from vacuum cleaners of participants who gave permission (93% of cases, 95% of controls) and who had used their vacuum cleaner within the past year and owned at least half their carpets or rugs for ≥ 5 years [695 cases (57%), 521 controls (52%)]. Dust samples from 682 cases (98%) and 513 controls (98%) were successfully analyzed between September 1999 and September 2001.
Exposure to a mixture of 27 chemicals measured in house dust [5 PCBs, 7 polycyclic aromatic hydrocarbons (PAHs), and 15 pesticides] was of interest. The PCBs were congeners 105, 138, 153, 170, and 180. The PAHs were benz(a)anthracene, benzo(a)pyrene, benzo(b)fluoranthene, benzo(k)fluoranthene, chrysene, dibenz(ah)anthracene, and indeno(1,2,3-cd)pyrene. The pesticides were α-chlordane, γ-chlordane, carbaryl, chlorpyrifos, cis-permethrin, trans-permethrin, 2,4-dichlorophenoxyacetic acid (2,4-D), DDE, dichlorodiphenyltrichloroethane (DDT), diazinon, dicamba, methoxychlor, o-phenylphenol, pentachlorophenol, and propoxur. Extraction and analysis were performed on 2-g aliquots of dust samples using gas chromatography/mass spectrometry (GC/MS) in selected ion monitoring mode. Concentrations were quantified using the internal standard method. Usual detection limits were 20.8 ng/g of dust for α-chlordane, γ-chlordane, DDE, DDT, propoxur, o-phenylphenol, PAHs, and PCBs; 42–84 ng/g for chlorpyrifos, diazinon, cis-permethrin, dicamba, pentachlorophenol, and 2,4-D; and 121–123 ng/g for carbaryl and trans-permethrin. Changes in analytic procedures during the study resulted in increased detection limits for methoxychlor (from 20.7 to 62.5 ng/g). A small proportion of samples weighing < 2 g had detection limits that were higher than the usual detection limits.
The laboratory measurements for the 27 analytes contained various types of ‘‘missing data,’’ primarily when the concentration was below the minimum detection level. To a lesser extent, missing data occurred when there was co-elution between the target chemical and interfering compounds. Chemical concentrations were assumed to follow a log-normal distribution, and data were imputed using a “fill-in” approach to create 10 complete data sets for each of the 27 analytes. Details about the imputation of analyte values have been published previously (Colt et al. 2004 (link); Lubin et al. 2004 (link)).
A total of 1,180 subjects with complete dust analysis results and covariate values were included in this analysis. The sample included 508 (43%) controls and 672 (57%) cases, and was predominantly white (88%) with an average age of 60 years (SD = 11.2). Of these 1,180 subjects, 202 (17%) were from the Detroit study site, 340 (29%) from Iowa, 292 (25%) from Los Angeles, and 346 (29%) from Seattle.
Statistical analysis. In previous analyses of individual chemicals in the study population overall, we evaluated NHL risk comparing tertiles or other groupings of levels above the detection limit to those with no detectable level of the chemical (Colt et al. 2005 (link), 2006 (link); Hartge et al. 2005 (link)). Study site–specific risk estimates were not presented in these publications. Here, we used a weighted quartile sum approach in conjunction with nonlinear logistic regression to evaluate the effect of several chemical exposures together on the risk of NHL. Exposure to a mixture of 27 chemicals measured in house dust was evaluated overall and in study site–specific models. All models were adjusted for sex, age at diagnosis (cases)/selection date (controls), race, and level of education. Age was treated as continuous, race was dichotomized as white or non-white, and education was treated as ordinal (grouped as < 12, 12–15, and ≥ 16 years). In the overall model, we also adjusted for study site.
The WQS method (Carrico et al. 2014 (link)) is constrained to have associations in the same direction for chemical exposures and risk, and is designed for variable selection over prediction. WQS regression estimates a weighted linear index in which the weights are empirically determined through the use of bootstrap sampling. The approach considers data with c correlated components scored as ordinal variables into quantiles (here, quartiles) that are reasonable to combine (i.e., all chemicals) into an index and potentially have a common adverse outcome. The weights are constrained to sum to 1 and be between 0 and 1, thereby reducing dimensionality and addressing issues associated with collinearity. For this analysis, the c = 27 chemical concentrations were scored into quartiles based on the case and control data combined and denoted by qi, where qi = 0, 1, 2, or 3 for i = 1 to c. A total of B = 100 bootstrap samples (of the same size as the total sample, n = 1,180) were generated from the full data set and used to estimate the unknown weights, w, that maximized the likelihood for b = 1 to B for the following model
subject to the constraints cΣi=1wi|b  = 1 and 0 ≤ wi ≤ 1 for i = 1 to c. In the above equation, wi represents the weight for the ith chemical component qi, and the term cΣi=1wiqi represents a weighted index for the set of c chemicals of interest. Furthermore, z denotes a vector of covariates determined prior to estimation of the weights, φ are the coefficients for the covariates in z, and g(.) is any monotonic and differentiable link function that relates the mean, μ, to the predictor variables in the right hand side of the equation. Because the outcome variable of interest in this analysis is binary (case status), a logit link was assumed for g.
For each bootstrap sample, the p-value of β1, the parameter estimate for the weighted index, was used to evaluate the statistical significance of the estimated vector of weights (α = 0.10). The weighted quantile score was then estimated as
and nB is the number of bootstrap samples in which β1 was significant. Finally, the significance of the WQS index was determined using the original data set and the model
g(μ) = β0 + β1 WQS + z´φ, [2]
where exp(β1) is the odds ratio (OR) associated with a unit (quartile) increase in the weighted sum of exposure quartiles (WQS index).
Weights estimated from the full data set were used to create a WQS index denoted as WQSF. In addition to WQSF, four site-specific indices [denoted as WQSD (Detroit), WQSI (Iowa), WQSL (Los Angeles), and WQSS (Seattle)] were estimated using data from each site. Differences in the distributions of the chemical concentrations across sites prohibited the use of quantiles based on the full data set in the estimation of site-specific weights; therefore, we used site-specific quartiles based on the combined case–control distribution to estimate site-specific indices. The association between the WQS indices and NHL was examined by testing each index within its respective data set, with statistical significance set at α = 0.05. The primary statistical analysis was performed using one randomly selected imputation data set. A secondary analysis estimated WQS indices for all 10 imputed data sets to assess sensitivity of the results to the data imputation.
We conducted further analyses of major subtypes of NHL: diffuse large B-cell lymphoma (DLBCL), follicular lymphoma, small lymphocytic lymphoma/chronic lymphocytic leukemia (SLL/CLL), marginal zone lymphomas, other lymphomas, and lymphomas where subtype was not specified/unknown [not otherwise specified (NOS)]. Our study primarily included SLL rather than CLL (Morton et al. 2008 (link)). Other lymphomas consisted of mantle cell lymphoma, lymphoplasmacytic lymphoma, Burkitt lymphoma/leukemia, mycosis fungoides/Sézary syndrome, and peripheral T-cell lymphoma. We fitted WQS regression models separately for each of these groups to determine whether the mixture effect varied by subtype using all 508 controls in each model.
As a comparison to the WQS regression results, we also conducted single chemical analyses (one-by-one) for all of the data (adjusted for study site) and separately within each study site using study site–specific cut points based on the distributions among cases and controls combined. Models were adjusted for sex, age, race, and level of education. ORs comparing each of the three highest quartiles to the first quartile of exposure were estimated for each individual chemical. Given the exploratory nature of these analyses, no adjustments were made for multiple comparisons.
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Publication 2015
PAH standards (purities ≥ 99%) were obtained from ChemService, Inc. (West Chester, PA, USA). Target analytes included naphthalene (NAP), acenaphthene (ACE), acenaphthylene (ACY), fluorene (FLO), anthracene (ANT), phenanthrene (PHE), fluoranthene (FLA), pyrene (PYR), chrysene (CHR), benz(a)anthracene (BAA), benzo(b)fluoranthene (BBF), benzo(k)fluoranthene (BKF), benzo(a)pyrene (BAP), benzo(ghi)perylene (BPL), and indeno123(cd)pyrene (IPY). Cleanup and extraction solvents were pesticide or Optima® grade from Fisher Scientific (Fairlawn, NJ, USA).
Water quality data included temperature, pH, dissolved oxygen, specific conductivity, oxidative-reductive potential (ORP) and nitrate and ammonium concentrations, and were collected at each site during sampler deployment and retrieval using a YSI® sonde. Additionally, grab samples were also taken at sampler deployment and retrieval at certain sites for analysis of total and dissolved organic carbon (TOC and DOC), as well as total suspended and total dissolved solids (TSS and TDS). The two measurements were averaged for each sampling event and results are summarized in Supporting Information.
SPMD field cleanup and laboratory extraction were performed as previously described (20 (link)) and in accordance with standard operating procedures and standard analytical methods. Quality control consisted of field blanks, trip blanks and field cleanup blanks. Laboratory quality control included reagent blanks, high and low concentration fortifications, and unexposed fortified SPMDs. Quality control resulted in duplicate sites average RSD equaling 15%, and target compounds in blanks were either non-detect or below levels of quantitation.
After extraction, samples were solvent exchanged into acetonitrile and analyzed by HPLC with diode-array and fluorescence detectors. DAD signals were 230 and 254 nm and FLD excitation and emissions were 230 and 332, 405, 460, respectively. Flow was 2.0 mL/min beginning with 40/60% acetonitrile and water and steadily ramping to 100% acetonitrile over a 28 minute run per column maker recommendations. Because the low molecular weight volatile compounds were impacted by the method solvent evaporation steps, SPMD concentrations were recovery corrected with method recovery averages ranging from 35% for NAP to 95% for BPL (Supporting Information Table S1).
The equation established for converting SPMD concentrations (CSPMD) to water concentrations (Cwater) using laboratory sampling rates (Rs) in L/day is:
Cwater=CSPMDVSPMDRst where VSPMD is the volume of the sampler and t is the time in days. Laboratory sampling rates from the literature were used and temperature corrected using a trendline based on rates at three temperatures: 10, 18, and 26° C (9 , 21 (link)). Loads were calculated from the concentrations using USGS flow estimates at the Portland station. Data analysis was performed using Microsoft Excel® 2003, SigmaStat® for t-tests and rank sum tests, S+® for principal component analysis and SigmaPlot® for graphing.
Publication 2008
acenaphthene acenaphthylene acetonitrile Ammonium anthracene Benzo(a)pyrene benzo(b)fluoranthene benzo(k)fluoranthene chrysene Dissolved Organic Carbon Electric Conductivity fluoranthene fluorene Fluorescence High-Performance Liquid Chromatographies naphthalene Nitrates Oxidation-Reduction Oxygen Perylene Pesticides phenanthrene pyrene Scapuloperoneal Myopathy, MYH7-Related Solvents

Datasets. Six real-world datasets were used towards comparing the classification performance of RS, KS and MLM algorithms. Dataset 1 contains 280 infrared (IR) spectra of two Cryptococcus fungi specimens acquired via attenuated total reflection Fourier-transform infrared (ATR-FTIR) spectroscopy. This dataset is publically available at https://doi.org/10.6084/m9.figshare.7427927.v1. Class 1 is composed of 140 spectra of Cryptococcus neoformans samples and class 2 of 140 spectra of Cryptococcus gattii samples. Spectra were acquired in the 400–4000 cm−1 spectral range with a resolution of 4 cm−1 and 16 co-added scans using a Bruker VERTEX 70 FTIR spectrometer (Bruker Optics, Ltd., UK). The spectral data were pre-processed by excising the biofingerprint region (900–1800 cm−1), which was followed by automatic weighted least squares (AWLS) baseline correction and normalization to the Amide I peak (1650 cm−1). More details regarding this dataset can be found in literature (Costa et al., 2016 ; Morais et al., 2017 ).
Dataset 2 contains 240 IR spectra derived from formalin-fixed paraffin-embedded brain tissues separated into two classes. Class 1 contains 140 spectra from normal brain tissue, and class 2 contains 100 spectra from glioblastoma brain tissue. Spectra were collected via ATR-FTIR spectroscopy using a Bruker VECTOR 27 FTIR spectrometer with a Helios ATR attachment (Bruker Optics, Ltd., UK). The raw spectra, acquired in the 400–4000 cm−1 spectral range with a resolution of 8 cm−1 and 32 co-added scans, were pre-processed by excising the biofingerprint region (900–1800 cm−1), which was followed by rubberband baseline correction and normalization to the Amide I peak (1650 cm−1). This dataset is publicly available as part of the IRootLab toolbox (http://trevisanj.github.io/irootlab/) (Trevisan et al., 2013 (link)), and more information about it can be found in Gajjar et al. (2012) (link).
Dataset 3 contains 183 IR spectra distributed into 3 classes. Class 1 contains 59 spectra of Syrian hamster embryo (SHE) cells treated with benzo[a]pyrene (B[a]P), class 2 contains 62 spectra of SHE cells treated with 3-methylcholanthrene (3-MCA) and class 3 contains 62 spectra of SHE cells treated with anthracene (Ant). Spectra were acquired in the 400–4000 cm−1 spectral range with a resolution of 8 cm−1 by using a Bruker TENSOR 27 spectrometer with a Helios ATR attachment (Bruker Optics, Ltd., UK). Pre-processing was performed by excising the biofingerprint region (900–1800 cm−1), which was followed by rubberband baseline correction and normalization to the Amide I peak (1650 cm−1). This dataset is publicly available as part of the IRootLab toolbox (http://trevisanj.github.io/irootlab/) (Trevisan et al., 2013 (link)), and further information can be found in Trevisan et al. (2010) (link).
Dataset 4 contains 270 IR spectra from blood samples divided into four classes. Class 1 is composed of 90 IR spectra of control samples, class 2 contains 88 spectra from patients with Dengue, class 3 contains 66 spectra from patients with Zika and class 4 contains 26 spectra from patients with Chikungunya. This dataset is publically available at https://doi.org/10.6084/m9.figshare.7427933.v1. Spectra were collected in ATR mode by using a Bruker VERTEX 70 FTIR spectrometer (Bruker Optics, Ltd., UK). Acquisition was performed in the 400–4000 cm−1 spectral range with a resolution of 4 cm−1 and 16 co-added scans. Pre-processing was performed by excising the biofingerprint region (900–1800 cm−1), which was followed by Savitzky-Golay smoothing (window of 7 points) (Savitzky and Golay, 1964 ), AWLS baseline correction and normalization to the Amide I peak (1650 cm−1). Further details about this dataset can be found in Santos et al. (2018) .
Dataset 5 contains 351 Raman spectra of blood plasma divided into two classes: 162 spectra of healthy individuals (class 1), and 189 spectra of ovarian cancer patients (class 2). This dataset is publicly available at https://doi.org/10.6084/m9.figshare.6744206.v1. Raman spectra were collected using an InVia Renishaw Raman spectrometer coupled with a charge-coupled device (CCD) detector and Leica microscope, with 5% laser power (785 nm), 5x objective magnification, 10 s exposure time and 2 accumulations in the spectral range of 400–2000 cm−1. The spectral data were pre-processed by Savitzky-Golay smoothing (window of 15 points), AWLS baseline correction and vector normalization. Further details about this dataset can be found in Paraskevaidi et al. (2018) (link).
Dataset 6 contains 322 surface-enhanced Raman spectroscopy (SERS) spectra of blood plasma also divided into two classes: 133 spectra of healthy individuals (class 1), and 189 spectra of ovarian cancer patients (class 2). This dataset is publicly available at https://doi.org/10.6084/m9.figshare.6744206.v1. SERS spectra were collected using the same settings for dataset 5 but, in this case, silver nanoparticles were mixed with the biofluid before spectral acquisition. The spectral pre-processing was performed using Savitzky-Golay smoothing (window of 15 points), AWLS baseline correction and vector normalization. Further details about this dataset can be found in Paraskevaidi et al. (2018) (link).
Simulations were also performed with simulated data. This data were generated for each simulation (1000 simulations) based on a normally distributed random matrix with size of 100 × 1000 for class 1, and 100 × 1000 for class 2 (100 observations, 1000 variables per observation). The matrix values ranged randomly from -10 to 10 units. A shift of 5 units was randomly added to class 2 to create a difference between the classes. The codes to produce class 1 and class 2 in MATLAB are ‘class_1 = randn(100, 1000).*randn(100, 1000);’ and ‘class_2 = (randn(100, 1000)+5).*randn(100, 1000);’. Class 1 and class 2 were generated for each simulation (1000 times), where all algorithms (RS, KS and MLM) were independently applied per each simulation.
Software. Data analysis was performed within the MATLAB R2014b (MathWorks, Inc., USA) environment. Pre-processing was performed using PLS Toolbox 7.9.3. (Eigenvector Research, Inc., USA) and classification was performed using the Classification Toolbox for MATLAB (http://www.michem.unimib.it/) (Ballabio and Consonni, 2013 ). RS, KS and MLM algorithms were performed using laboratory-generated routines. MLM algorithm is public available at https://doi.org/10.6084/m9.figshare.7393517.v1.
Sample selection. Samples were divided into training (70%) and test (30%) sets using, independently, the RS, KS or MLM algorithms. RS is based on a random sample selection where spectra from the original dataset are randomly assigned to training or test. KS algorithm is based on an Euclidian distance calculation, where the sample with maximum distance to all other samples are selected, then the samples which are as far away as possible from the selected samples are selected, until the selected number of samples is reached. This means that the samples are selected in such a way that they will uniformly cover the complete sample space, reducing the need for extrapolation of the remaining samples. MLM algorithm, based on a KS-based approach, applies a KS method to the data, as described before; then, a random-mutation factor is used in the KS results, where some samples from the training set are transferred to the test set, and some samples from the test set are transferred to training. Herein, the mutation factor was set at 10%. This value is inspired in the mutation probability of genetic algorithms (Morais et al., 2019 (link)), where 10% is a common threshold employed to keep a balance between the degree of randomness and model convergence. MLM algorithm is visually illustrated in Figure 1.
Classification. Classification was performed based on a PCA-LDA algorithm. For this, initially a principal component analysis (PCA) model is applied to the pre-processed data, decomposing the spectral space into a small number of PCs representing most of the original data-explained variance (Bro and Smilde, 2014 ). Each PC is composed of scores and loadings, the former representing the variance on samples direction, and the latter the variance on variables (e.g. wavenumber) direction. Then, the PCA scores are used as input for a linear discriminant analysis (LDA) classifier. LDA performs a Mahalanobis distance calculation to linearly classify the input space (PCA scores) into at least two classes (Dixon and Brereton, 2009 ; Morais and Lima, 2018 ). The LDA classification scores ( Lik ) can be calculated in a non-Bayesian form as (Dixon and Brereton, 2009 ; Morais and Lima, 2018 ):
Lik=xi-x¯kTCpooled-1xi-x¯k where xi is a vector containing the input variables for sample i ; x¯k is the mean vector of class k ; Cpooled is the pooled covariance matrix between the classes; and, T represents the matrix transpose operation. Model optimization was performed using cross-validation venetian blinds with 10 splits.
The PCA-LDA classification performance was evaluated by means of accuracy, sensitivity and specificity calculations. Accuracy represents the total number of samples correctly classified considering true and false negatives; sensitivity measures the proportion of positives that are correctly identified; and, specificity measures the proportion of negatives that are correctly identified (Morais and Lima, 2017 ). These parameters are calculated as follows:
Accuracy (%)=((TP+TN)/(TP+FP+TN+FN))×100 Sensitivity (%)=(TP/(TP+FN))×100 Specificity (%)=(TN/(TN+FP))×100 where TP stands for true positives; TN for true negatives; FP for false positives; and, FN for false negatives.
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Publication 2019
Male and female adult E6/E7 transgenic mice and age matched nontransgenic control mice received topical treatments of DMBA (dimethylbenz[a]anthracene) dissolved in 100% DMSO (dimethylsulfoxide) to the anal canal once per week for twenty weeks. Treatments were initiated between 5 and 7 weeks of age. Prior to topical treatment, the mouse anal canal was evacuated of feces using manual, external pressure to the pelvic brim. Mice were treated with 0.12, 0.04 or 0.012 μmoles DMBA or DMSO without DMBA. All treatments had 4 μL of liquid inserted 5-10mm into the anal canal using a standard pipette tip. After twenty weeks of treatment, mice had an eight-week hiatus before being euthanized and anal tissue harvested for histological analysis. Mice were monitored weekly for appearance of overt tumors though only overt tumors present at sacrifice were included in the tumor phenotype data (Table 2). Overt tumors were defined as any neoplastic lesion in the anal region capable of being seen by the examiner's naked eye that proved to be a tumor upon histopathological assessment, regardless of disease classification (papilloma, atypia, carcinoma). Overt tumor size (diameter in mm) was measured at the time of sacrifice.
Publication 2010
9,10-Dimethyl-1,2-benzanthracene Administration, Topical Adult Aftercare Anal Canal anthracene Anus Carcinoma Feces Males Mice, Laboratory Mice, Transgenic Neoplasms Papilloma Pelvis Phenotype Pressure Sulfoxide, Dimethyl Tissues Vision Woman

Most recents protocols related to «Anthracene»

For transferring WSe2 flakes onto CNTs, we grow anthracene crystals through an in-air sublimation process17 (link),18 (link). Anthracene powder is heated to 80 °C on a glass slide, while another glass slide is placed 1 mm above the anthracene source. Thin and large-area single crystals are then grown on the glass surface. To promote the growth of large-area single crystals, we pattern the glass slides using ink from commercial markers. The typical growth time for anthracene crystals is 10 h.
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Publication 2024
First, WSe2 (HQ graphene) flakes are prepared on 90-nm-thick SiO2/Si substrates using mechanical exfoliation, and the layer number is determined by optical contrast. An anthracene single crystal is picked up with a glass-supported PDMS sheet to form an anthracene/PDMS stamp. Next, the WSe2 flakes are picked up by pressing the anthracene/PDMS stamp against a substrate with the target WSe2 flakes. The stamp is quickly separated ( > 10 mm/s) to ensure that the anthracene crystal remains attached to the PDMS sheet. The stamp is then applied to the receiving substrate with the desired chirality-identified CNT, whose position is determined by a prior measurement. Precise position alignment is accomplished with the aid of markers prepared on the substrate. By slowly peeling off the PDMS ( < 0.2 μm/s), the anthracene crystal with the WSe2 flake is released on the receiving substrate. Sublimation of anthracene in air at 110 °C for 10 min removes the anthracene crystal, leaving behind a clean suspended CNT/WSe2 heterostructure. This all-dry process eliminates contamination from solvents, and the solid single-crystal anthracene protects the 2D flakes and the CNT during the transfer, ensuring that the CNT/WSe2 heterostructure experiences minimal strain17 (link),18 (link).
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Publication 2024
A benzene solution (2 mL) of 1 (0.1
g, 0.01 mmol) was added to anthracene (20.4 mg, 0.01 mmol) in 2 mL
of benzene at room temperature. The color of the solution rapidly
changed from orange to light yellow. After stirring the solution for
4 h, it was filtered via cannula filtration. The solution was then
concentrated to 1 mL, and hexane (1 mL) was added to aid in crystallization.
After 7 days, colorless crystals of compound 6 were obtained,
which were suitable for X-ray diffraction analysis. For further analysis,
the solvent was decanted, and the colorless crystals were washed once
with hexane and dried in a high vacuum. Compound 6 was
isolated as a colorless crystalline material (91 mg, 0.08 mmol, 75%
yield). NB: after crystallization, 6 is poorly soluble
in common aromatic and aliphatic organic solvents. The addition of
THF-d8 to compound 6 or to
a 1:1 mixture of 1 and anthracene leads to the rapid
formation of the 1,4-activated product, presumably due to K+ sequestration
by THF-d8 (Figure S19). 1H NMR (400 MHz, Toluene-d8, 297 K): δ = 1.08–1.19 (m, 48H, CH(CH3)2), 2.98 (br 2H, C9,10-H, anthra), 3.27 (br, 8H, CH(CH3)2), 5.76 (s, 4H, NCH), 6.28–6.37
(br, 8H, C1,2,3,4,5,6,7,8-H, anthra),
6.96–7.07 (br, 12H, ArDipp-H). 13C{1H} NMR (100 MHz, C6D6): δ = 23.6–25.5 (CH(CH3)2), 26.2–28.5 (CH(CH3)2), 115.6–117.1 (NCH), 122.6–123.5 (Dipp-m-CH), 125.5–126.7
(CH, C1,4,5,8-Anth), 127.5–128.0
(CH, C2,3,6,7-Anth), 131.3–132.2
(Dipp-p-CH), 140.0 (Dipp-i-C), 141.1 (C, C4a,8a,9a,10a-Anth), 147.8 (Dipp-o-C). 11B{1H} NMR (128 MHz, C6D6):
δ = 20.2. Anal. Calcd. [%] for C66H82AlB2KN4O2: C, 75.42; H, 7.86; N, 5.33. Found:
C, 74.98; H, 7.36; N, 5.13.
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Publication 2024
For the simulations, the file with an sdf extension containing the molecular structure of anthracene was downloaded from Zinc12 (ZINC01586329) [47 (link)] and transformed into files with extension mol2 using Openbabel 2.3.1 [48 (link)]. This tool was also used to minimize the structure of the ligand by applying the steepest descent algorithm, MMFF94 force field, and 50,000 steps for fitting after adding hydrogens to the molecule. We used Autodock Tools 4 (ver. 1.5.6) [49 (link)] to prepare the molecule as ligands for docking analysis. We visualized and set the torsion parameters, and then saved the file with the extension pdbqt for its submission for docking analysis. The molecular structure of Cc was downloaded from the Protein Data bank (PDB file: 1HRC), which corresponds to the high-resolution three-dimensional structure of horse heart Cc. For docking preparation, water molecules were removed from the structure, hydrogens were added (polar only), and Kollmand charges were added using Autodock Tools 4. The prepared file for docking was saved as a pdbqt file. The grid for the docking analysis was structured as follows: center x = 46.839, center y = 23.029, center z = 5.505 with a box size of: 52 for x, 52 for y and 52 for z.
The docking analysis was performed with AutodockVina 1.1.2 and the previously indicated files for the receptor (PDB:1HRC.pdbqt) and the ligand (anthracene.pdbqt) [50 (link)] by using the previously indicated grid for Cc and an exhaustiveness value of 9. The top 10 ranked poses associated with models of the ligand–Cc complex were visually analyzed using UCSF Chimera 1.15 [51 (link)] and clustered by homology. The binding site for anthracene was defined and selected based on the residues making contact and clashing with the ligand within a distance of 0.1 Å. We gathered similar poses together in subclusters for each experiment. Each experiment was performed in triplicate. A cluster was defined as the set of residues present in subclusters in all the performed individual experiments. The lowest energy value of the top-ranked pose present in a subcluster forming a cluster was selected as the energy value for the selected cluster.
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Publication 2024
A solution of quinone 8b (17 mg, 0.94 mmol) and anthracene (184 mg, 1.03 mmol) in chloroform (100 mL) was refluxed for 16 h. The solution was cooled and evaporated under vacuum. The residue was chromatographed on silica gel eluting with a gradient from dichloromethane to dichloromethane/ethyl acetate (7:3), to yield 163 mg (49%) of compound 16. [Found: C, 78.54; H, 4.21; N, 3.88. C24H15NO3 requires: C, 78.89; H, 4.14; N, 3.83]. Mp, 306–308 °C (AcOEt). νmax (KBr): 1650, 1630 (CO) cm−1. 1H NMR (d6-DMSO, 300 MHz) δ: 10.86 (br s, 1H, NH), 7.52 (m, 4H, anthracene), 7.05 (m, 4H, anthracene), 6.46 (d, 1H, J = 1.2 Hz, H-3); 5.96 and 5.94 (2s, 2H, C9′-H and C10′-H), 2.46 (d, 3H, J = 1.2 Hz, C4-CH3) ppm. 13C NMR (d6-DMSO, 75 MHz) δ: 180.45 (C-8), 175.97 (C-5), 161.92 (C-2), 155.46 (C-6), 151.64 (C-4), 149.46 (C-7), 143.08 (C-4a′, C-8a′, C-9a′, C-10a′), 138.58 (C-8a), 126.39 (C-3), 125.78 and 125.71 (C1′, C-4′, C-5′, C-8′), 124.55 and 124.39 (C-2, C-3, C-6, C-7), 113.25 (C-4a), 47.72 (C-9′), 47.05 (C-10′), 22.25 (C4-CH3) ppm.
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Publication 2024

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