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Cyclohexane

Cyclohexane is a colorless, flammable, cyclic alkane with the chemical formula C6H12.
It is a common organic solvent used in a variety of industrial and laboratory applications, including as a precursor for the production of adipic acid, a key intermediate in the manufacture of nylon.
Cyclohexane has a characteristic sweet odor and is slightly soluble in water.
It is an important model compund for the study of conformational analysis and reaction mechanisms in organic chemistry.
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Most cited protocols related to «Cyclohexane»

All simulations were performed
in the isothermal–isobaric ensemble, NPT,
at a pressure of 1 atm. The pressure was held constant by using the
Parrinello–Rahman barostat77 with
a coupling constant of 10.0 ps with an isothermal compressibility
of 4.5 × 10–5 bar–1. For
the bulk liquids an isotropic pressure coupling was used and for the
bilayer simulations a semi-isotropic pressure coupling scheme was
used. The temperature was kept constant by the Nosé–Hoover
thermostat78 ,79 (link) with a coupling constant of 0.5 ps. The
lipid bilayer and water were coupled separately to the thermostat.
Long-range electrostatic interactions were treated by a particle-mesh
Ewald scheme80 ,81 with a real-space cutoff at 1.4
nm with a Fourier spacing of 0.10 nm and a fourth-order interpolation
to the Ewald mesh. Single-atom charge groups were used. van der Waals
interactions were truncated at 1.5 nm and treated with a switch function
from 1.4 nm. Long-range corrections for the potential and pressure
were added.51 The inclusion of long-range
corrections should eliminate the LJ cutoff dependency in the simulations.
Due to the fact that lipid bilayers are inhomogeneous systems the
method introduced by Lagüe et al.82 to add long-range corrections could be applied instead. Periodic
boundary conditions were imposed in every dimension. A time step of
2 fs was used with a Leap-Frog integrator. The LINCS algorithm83 was used to freeze all covalent bonds in the
lipid, and the analytical SETTLE84 method
was used to hold the bonds and angle in water constant. The TIP3P
water model85 was the water model of choice.
The choice of water model can be explained by the fact that TIP3P
is the default water model in major FFs such as AMBER and CHARMM and
since one of the aims of the work presented here was to create a lipid
FF compatible with AMBER this was a natural choice. Further, earlier
work of Högberg et al.31 (link) has shown
that there is flexibility in the choice of water model for AA simulations
of lipid bilayers. Atomic coordinates were saved every 1 ps and the
neighbor list was updated every 10th step.
Bulk liquids were
simulated with a simulation box consisting of 128 molecules for the
larger alkanes and 256 for the smaller alkanes (hexane and heptane)
at a temperature of 298.15 K. The lipid bilayer systems were prepared
using the CHARMM-GUI86 (link),87 (link) with 128 lipids in total, 64
in each leaflet. In order to achieve proper hydration, 30 TIP3P water
molecules were added per lipid. Three different lipid types were simulated,
DLPC (12:0/12:0), DMPC (14:0/14:0), and DPPC (16:0/16:0). These system
were investigated under a range of temperatures; see Table 1 for an overview of all simulations performed. All
lipid bilayer systems were equilibrated for 40 ns before production
runs were initiated which lasted for 300–500 ns. All MD simulations
were performed with the Gromacs88 software
package (versions 4.5.3 and 4.5.4). All analysis were made with the
analysis tools that come with the MDynaMix software package.89 System snapshots were rendered and analyzed
with VMD.90 Neutron scattering form factors
were computed with the SIMtoEXP software.91 (link)The calculations of free energies of solvation in
water and cyclohexane
were performed by using thermodynamic integration over 35 λ
values in the range between 0 and 1. A soft core potential (SCP) was
used to avoid singularities when the solute is almost decoupled from
the solvent. The α-parameters used for the SCP and the simulation
workflow were set following the methodology described by Sapay and
Tieleman.92 (link) The amino acid analogues were
solvated with 512 and 1536 molecules of cyclohexane and water, respectively.
Publication 2012
Alkanes Amber Amino Acids ARID1A protein, human Cyclohexane Dietary Fiber Dimyristoylphosphatidylcholine Electrostatics Freezing Heptane Lipid Bilayers Lipids Maritally Unattached n-hexane Natural Selection Pressure Rana Solvents

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Publication 2011
1,2-dioleoyloxy-3-(trimethylammonium)propane 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-methoxy-poly(ethylene glycol 2000) 1,2-distearoylphosphatidylethanolamine 1,2-oleoylphosphatidylcholine Chloroform Cholesterol Cyclohexane Emulsions Ethanol Lipids Liposomes Molar Pellets, Drug Phosphates polycarbonate Protamines RNA, Small Interfering Surfactants Tissue, Membrane Tromethamine

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Publication 2015
Biological Assay Cells Chloroform Cyclohexane ethyl acetate Hyperostosis, Diffuse Idiopathic Skeletal Lipids Pellets, Drug Pulse Rate Silica Gel Solvents Typhoons
Primary B cells were isolated from spleens of IgHB1-8/B1-8 Igκ −/− transgenic mice (provided by M. Shlomchik, Yale University, New Haven, CT) by negative selection using MACS sorting as described previously (18 (link)). Isolated B cells were cultured overnight with CpG and LPS (Calbiochem, San Diego, CA) and experimented next day. The J558L B cells stably expressing B1-8-γ-cyan fluorescent protein (CFP) and Igα-yellow fluorescent protein (YFP) (γCαY) were established and characterized as previously described (21 (link)). Daudi B cell line stably expressing Lyn16-CFP-YFP fusion protein and CH27 B cell line stably expressing the lipid raft probe Lyn16-CFP, the nonlipid raft probe CFP-Ger, or the full length LynFL-CFP were established and characterized as previously reported (19 (link)). ST486, a human B cell line and A20II1.6, a mouse B cell line, both negative for endogenous FcγRIIB expression, were purchased from the American Type Culture Collection (Manassas, VA). PT67 cell line, a virus packaging cell line, was purchased from BD Clontech (Palo Alto, CA).
Cy3- and Cy5-conjugated Fab goat Abs specific for mouse IgM and IgG were purchased from Jackson ImmunoResearch Laboratories (West Grove, PA). Cy3-conjugated Fab rat mAb specific for mouse IgM (clone no. II/41) was purchased from Rockland (Gilbertsville, PA). Rabbit IgG Abs specific for BSA (rabbit anti-BSA) were purchased from Bethyl Laboratories (Montgomery, TX) and F(ab′)2 rabbit anti-BSA were prepared as described (20 (link)). PE-conjugated and biotin-conjugated rat mAb specific for mouse FcγRIIB (clone no. 2.4G2) and APC-conjugated mouse mAb specific for human FcγRIIB (clone no. FLI8.26) were purchased from BD Pharmingen (San Diego, CA). Biotin-conjugated mouse mAb specific for human FcγRIIB (clone no. AT10) was purchased from AbD Serotec (Raleigh, NC). Biotin-conjugated F(ab′)2 goat Abs specific for mouse IgG and IgM, biotin-conjugated F(ab′)2 rabbit Abs specific for human IgM, and streptavidin were purchased from Jackson ImmunoResearch Laboratories. Rat mAb specific for mouse FcγRIIB (clone no. 190907) was purchased from R&D Systems (Minneapolis, MN) and Fabs mAb 190907 were prepared using an immobilized papain kit (Pierce, Rockford, IL) following the manufacturer’s protocol. Conjugations of Abs with Alexa514, 568, or 647 were performed using Alexa Fluor mAb labeling kits (Molecular Probes, Eugene, OR) following manufacturer’s protocols. BSA conjugated 1:14 with 4-hydroxy-5-iodo-3-nitrophenyl acetyl (NIP) (NIP14-BSA) and BSA conjugated 1:16 with phosphorylcholine (PC16-BSA) were purchased from Biosearch Technologies (Novato, CA). NIP14-BSA and PC16-BSA were conjugated to a Cys-containing peptide terminated with a His12 tag (ASTGTASACTSGASSTGSH12) using succinimidyl-4-(N-maleimidomethyl) cyclohexane-1-carboxylate (Pierce) following manufacturer’s protocols. ICs were formed by mixing 10 nM His12 tagged NIP14-BSA or PC16-BSA with 20 nM rabbit anti-BSA (for IgG-IC) or F (ab′)2 rabbit anti-BSA [for F(ab′)2-IC]. Recombinant ICAM-1 with a His12 tag was a gift of J. Huppa (Stanford University, Palo Alto, CA). The mouse ICAM-1/huFc chimera protein with a His12 tag was purchased from R&D Systems. Conjugation of His12-tagged NIP14-BSA and PC16-BSA to Cy5 and His12-tagged ICAM-1 to AlexaFluor488 were performed following manufacturer’s protocols (19 (link)).
Publication 2010
B-Lymphocytes Biotin biotin 2 Cell Lines Cells Chimera Clone Cells Cyan Fluorescent Protein Cyclohexane Goat Homo sapiens Icam1 protein, mouse Intercellular Adhesion Molecule-1 Iodine Lipids Mice, Transgenic Molecular Probes Mus Papain PC 16 Peptides Phosphorylcholine Proteins Rabbits Streptavidin
The materials, methods for preparing DNA–invertase conjugate, additional characterization data, and detailed methods for sensor preparation and target detection are described in the Supplementary Information. Briefly, the DNA–invertase conjugates were prepared by using either sulfosuccinimidyl-4-(N-maleimidomethyl)cyclohexane-1-carboxylate (sulfo-SMCC) or p-phenylene diisothiocyanate (PDITC) as the linker between the DNA and invertase, and were further characterized by both native and sodium dodecyl sulfate polyacrylamide gel electrophoresis (~4–20% gradient). The MBs used for target detection were prepared by immobilization of the biotin-modified DNAs onto the streptavidin-coated MBs and subsequent addition of the functional DNAs and DNA–invertase conjugates. Target detection was conducted by adding the sample solution to the MBs prepared as above, separating the MBs using a magnet, mixing the remaining solution with sucrose, and then measuring the final solution using a commercially available PGM.
Publication 2011
Biotin bitoscanate Cyclohexane Immobilization Invertase MBS solution SDS-PAGE Streptavidin Sucrose sulfosuccinimidyl 4-(N-maleimidomethyl)cyclohexane-1-carboxylate

Most recents protocols related to «Cyclohexane»

Example 21

Complex Em9-i:

[Figure (not displayed)]

A solution of 0.17 g of complex Em9-s in 2000 ml acetonitril are irradiated at 15° C. for 9.5 h with a blacklight-blue-lamp (Osram, L18W/73, λmax=370-380 nm). The solvent is removed in vacuo. The residue is purified by chromatography (cyclohexane/acetic ester). 0.055 g of Em9-i (32%, contaminated with traces of a further complex) are obtained as well as 0.075 g of reisolated Em9-s (44%) are reisolated.

1H-NMR [CD2Cl2, 400 MHz, sample comprises traces of a further complex observable for example at 0.77 (m), 0.83 (d), 1.04 (d), 1.21 (m), 1.92 (sept), 2.34 (sept), 7.20-7.23 (m), 7.31-7.34 (m)]:

δ=0.65 (d, 3H), 0.77 (d, 3H), 0.85 (d, 3H), 0.97 (d, 3H), 0.98 (d, 3H), 1.02 (d, 3H), 1.13 (d, 6H), 1.82 (sept, 1H), 2.33 (sept, 1H), 2.54 (sept, 1H), 2.67 (sept, 1H), 3.04 (s, 3H), 6.09 (dd, 2H), 6.37 (td, 1H), 6.40-6.44 (m, 3H), 6.50 (m, 1H), 6.59 (d, 1H), 6.61 (td, 1H), 6.68 (d, 1H), 6.70 (d, 1H), 6.72 (d, 1H), 6.86 (d, 1H), 6.96 (br.s, 1H), 7.14 (me, 2H), 7.20-7.23 (m, 1H), 7.23-7.31 (m, 3H), 7.44-7.50 (m, 3H).

MS (Maldi):

m/e=979 (M+H)+

photoluminescence (in film, 2% in PMMA):

λmax=457, 485 nm, CIE: (0.17; 0.26)

The photoluminescence quantum efficiency of the isomer Em9-i has the 1.14-fold value of the quantum efficiency of the isomer Em9-s.

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Patent 2024
1H NMR carbene Chromatography Cyclohexane Esters Isomerism NADH Dehydrogenase Complex 1 Polymethyl Methacrylate Solvents Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization Suby's G solution

Example 1

<Step (A): Synthesis of porous particle having glycidyl group>

27.8 g of glycidyl methacrylate (trade name: Blemmer G (registered trademark) manufactured by NOF Corporation), 11.3 g of glycerin-1,3-dimethacrylate (trade name: NK Ester 701, SHIN-NAKAMURA CHEMICAL Co., Ltd.), and 1.9 g of 2,2′-azobis(2,4-dimethylvaleronitrile) were dissolved in 58.7 g of diethyl succinate as a diluent, and nitrogen gas was bubbled for 30 minutes to provide an oil phase.

Next, separately from the oil phase, 10.0 g of PVA-224 (manufactured by Kuraray Co., Ltd., polyvinyl alcohol having a degree of saponification of 87.0% to 89.0%) as a dispersion stabilizer and 10.0 g of sodium chloride as a salting-out agent were dissolved in 480 g of ion exchanged water to provide an aqueous phase.

The aqueous phase and the oil phase were placed in a separable flask and dispersed at a rotation speed of 430 rpm for 20 minutes using a stirring rod equipped with a half-moon stirring blade, then the inside of the reactor was purged with nitrogen, and the reaction was carried out at 60° C. for 16 hours.

After that, the resulting polymer was transferred onto a glass filter and thoroughly washed with hot water at about 50 to 80° C., denatured alcohol, and water in the order presented to obtain 100.4 g of a porous particle (carrier al).

The amount of glycidyl methacrylate used was 79.8 mol % based on the total amount of the monomers, and the amount of glycerin-1,3-dimethacrylate used was 20.2 mol % based on the total amount of the monomers.

<Step (B): Introduction reaction of alkylene group>

98 g of the carrier α1 was weighed onto a glass filter and thoroughly cleaned with diethylene glycol dimethyl ether. After cleaning, the carrier α1 was placed in a 1 L separable flask, 150 g of diethylene glycol dimethyl ether and 150 g (920 mol % based on glycidyl methacrylate) of 1,4-butanediol were placed in the separable flask, and stirring and dispersion were carried out.

After that, 1.5 ml of a boron trifluoride diethyl ether complex was added, the temperature was raised to 80° C. while stirring at 200 rpm, and the resulting mixture was subjected to the reaction for 4 hours.

The mixture was cooled, then the porous particle (carrier β1) bonded to a diol compound including an alkylene group in the structure thereof was collected by filtration and then washed with 1 L of ion exchanged water to obtain 152 g of a carrier β1.

The progress of the reaction was confirmed by the following procedure.

A part of the dry porous particle into which an alkylene group had been introduced was mixed with potassium bromide, and the resulting mixture was pelletized by applying a pressure and then measured using FT-IR (trade name: Nicolet (registered trademark) iS10, manufactured by Thermo Fisher Scientific Inc.) to check the height of an absorbance peak at 908 cm−1 due to the glycidyl group in the infrared absorption spectrum.

As a result, no absorbance peak at 908 cm−1 was observed by FT-IR.

<Step (C): Introduction Reaction of Glycidyl Group>

150 g of the carrier β1 was weighed onto a glass filter and thoroughly cleaned with dimethylsulfoxide.

After cleaning, the carrier β1 was placed in a separable flask, 262.5 g of dimethyl sulfoxide and 150 g of epichlorohydrin were added, the resulting mixture was stirred at room temperature, 37.5 ml of a 30% sodium hydroxide aqueous solution (manufactured by KANTO CHEMICAL CO., INC.) was further added, and the resulting mixture was heated to 30° C. and stirred for 6 hours.

After completion of the reaction, the obtained product was transferred onto a glass filter and thoroughly washed with water, acetone, and water in the order presented to obtain 172 g of a porous particle into which a glycidyl group had been introduced (carrier γ1).

The introduction density of the glycidyl group in the obtained carrier γ1 was measured by the following procedure.

5.0 g of the carrier γ1 was sampled, and the dry mass thereof was measured and as a result, found to be 1.47 g. Next, the same amount of the carrier γ1 was weighed into a separable flask and dispersed in 40 g of water, 16 mL of diethylamine was added while stirring at room temperature, and the resulting mixture was heated to 50° C. and stirred for 4 hours. After completion of the reaction, the reaction product was transferred onto a glass filter and thoroughly washed with water to obtain a porous particle A into which diethylamine had been introduced.

The obtained porous particle A was transferred into a beaker and dispersed in 150 mL of a 0.5 mol/L potassium chloride aqueous solution, and titration was carried out using 0.1 mol/L hydrochloric acid with the point at which the pH reached 4.0 as the neutralization point.

From this, the amount of diethylamine introduced into the porous particle A into which diethylamine had been introduced was calculated, and the density of the glycidyl group of the carrier γ1 was calculated from the following expression.

As a result, the density of the glycidyl group was 880 μmol/g.
Density(μmol/g) of glycidyl group={0.1×volume(μL) of hydrochloric acid at neutralization point/dry mass(g) of porous particle into which glycidyl group has been introduced}<Step (D): Introduction Reaction of Polyol>

150 g of the carrier γ1, 600 mL of water, and 1000 g (13000 mol % based on glycidyl group) of D-sorbitol (log P=−2.20, manufactured by KANTO CHEMICAL CO., INC.) were placed in a 3 L separable flask and stirred to form a dispersion.

After that, 10 g of potassium hydroxide was added, the temperature was raised to 60° C. while stirring at 200 rpm, and the resulting mixture was subjected to the reaction for 15 hours.

The mixture was cooled, and then the reaction product was collected by filtration and washed thoroughly with water to obtain 152 g of a porous particle into which polyol had been introduced (carrier 61).

The obtained carrier 61 was classified into 16 to 37 μm using a sieve to obtain 140.5 g of a packing material 1.

<Evaluation of Alkali Resistance>

The alkali resistance was evaluated by calculating the amount of a carboxy group produced by hydrolysis of sodium hydroxide according to the following procedure.

First, 4 g of the packing material was dispersed in 150 mL of a 0.5 mol/L potassium chloride aqueous solution, and titration was carried out using 0.1 mol/L sodium hydroxide aqueous solution with the point at which the pH reached 7.0 as the neutralization point. From this, the amount of a carboxy group before hydrolysis included in the packing material was calculated from the following expression.
Amount(μmol/mL) of carboxy group=0.1×volume(μL) of sodium hydroxide aqueous solution at the time of neutralization/apparent volume (mL) of packing material

Here, the apparent volume of the packing material is the volume of the packing material phase measured after preparing a slurry liquid by dispersing 4 g of the packing material in water, transferring the slurry liquid to a graduated cylinder, and then allowing the same to stand for a sufficient time.

Subsequently, 4 g of the packing material was weighed into a separable flask, 20 mL of a 5 mol/L sodium hydroxide aqueous solution was added, and the resulting mixture was treated at 50° C. for 20 hours while stirring at 200 rpm. The mixture was cooled, then the packing material was collected by filtration, then washed with a 0.1 mol/L HCl aqueous solution and water in the order presented, and the amount of a carboxy group contained in the obtained packing material was calculated by the same method as above. From the difference between the amount of a carboxy group before and that after the reaction with the 5 mol/L sodium hydroxide aqueous solution, the amount of a carboxy group produced by the reaction with the 5 mol/L sodium hydroxide aqueous solution was calculated. As a result, the amount of a carboxy group produced was 21 μmol/mL.

If the amount of a carboxy group produced is 40 μmol/mL or less, the alkali resistance is considered to be high.

<Evaluation of Non-Specific Adsorption>

The obtained packing material was packed into a stainless steel column (manufactured by Sugiyama Shoji Co., Ltd.) having an inner diameter of 8 mm and a length of 300 mm by a balanced slurry method. Using the obtained column, a non-specific adsorption test was carried out by the method shown below.

The column packed with the packing material was connected to a Shimadzu Corporation HPLC system (liquid feed pump (trade name: LC-10AT, manufactured by Shimadzu Corporation), autosampler (trade name: SIL-10AF, manufactured by Shimadzu Corporation), and photodiode array detector (trade name: SPD-M10A, manufactured by Shimadzu Corporation)), and a 50 mmol/L sodium phosphate buffer aqueous solution as a mobile phase was passed at a flow rate of 0.6 mL/min.

Using the same sodium phosphate aqueous solution as the mobile phase as a solvent, their respective sample solutions of 0.7 mg/mL thyroglobulin (Mw of 6.7×105), 0.6 mg/mL γ-globulin (Mw of 1.6×105), 0.96 mg/mL BSA (Mw of 6.65×104), 0.7 mg/mL ribonuclease (Mw of 1.3×104), 0.4 mg/mL aprotinin (Mw of 6.5×103), and 0.02 mg/mL uridine (Mw of 244) (all manufactured by Merck Sigma-Aldrich) are prepared, and 10 μL of each is injected from the autosampler.

The elution time of each observed using the photodiode array detector at a wavelength of 280 nm was compared to confirm that there was no contradiction between the order of elution volume and the order of molecular weight size.

As a result, the elution volumes of the samples from the column packed with the packing material 1 were 8.713 mL, 9.691 mL, 9.743 mL, 10.396 mL, 11.053 mL, and 11.645 mL, and it was confirmed that there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that no non-specific adsorption was induced. When there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof, there was no non-specific adsorption, which is indicated as 0 in Table 1, and when there was a contradiction therebetween, non-specific adsorption was induced, which is thus indicated as X.

The porous particle (carrier al) obtained in the same manner as in Example 1 was subjected to the step D of Example 1.

<Step (D): Introduction Reaction of Polyol>

98 g of carrier al, 600 mL of water, and 1000 g (3050 mol % based on glycidyl group) of D-sorbitol (manufactured by KANTO CHEMICAL CO., INC.) were placed in a 3 L separable flask and stirred to form a dispersion.

After that, 10 g of potassium hydroxide was added, the temperature was raised to 60° C. while stirring at 200 rpm, and the resulting mixture was subjected to the reaction for 15 hours.

The mixture was cooled, and then the reaction product was collected by filtration and washed thoroughly with water to obtain 130 g of a porous particle into which a polyol had been introduced (carrier δ7).

The carrier δ7 was classified into 16 to 37 μm using a sieve to obtain 115 g of a packing material 7.

The alkali resistance of the obtained packing material 7 was evaluated in the same manner as in Example 1. As a result, the amount of a carboxy group produced in the packing material 7 was 120.3 μmol/mL, resulting in poor alkali resistance.

Further, the non-specific adsorption of the obtained packing material 7 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 8.606 mL, 9.769 mL, 9.9567 mL, 10.703 mL, 11.470 mL, and 12.112 mL, and it was confirmed that there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that no non-specific adsorption was induced.

Example 2

A porous particle (carrier al) was obtained in the same manner as in Example 1, and then a packing material 2 was obtained as follows.

98 g of the carrier α1 was weighed onto a glass filter and thoroughly cleaned with diethylene glycol dimethyl ether.

After cleaning, the porous particle was placed in a 1 L separable flask, 150 g of diethylene glycol dimethyl ether and 150 g (580 mol % based on the glycidyl group) of 1,4-cyclohexanedimethanol were placed in the separable flask, and stirring and dispersion were carried out.

After that, 1.5 ml of a boron trifluoride diethyl ether complex was added, the temperature was raised to 80° C. while stirring at 200 rpm, and the resulting mixture was subjected to the reaction for 4 hours.

The mixture was cooled, then the resulting porous particle (carrier $2) bonded to a diol compound including an alkylene group in the structure thereof was collected by filtration and then washed with 1 L of ion exchanged water to obtain 165 g of a carrier 32.

The progress of the reaction was confirmed by the following procedure.

A part of the dry porous particle into which an alkylene group had been introduced was mixed with potassium bromide, and the resulting mixture was pelletized by applying a pressure and then measured using FT-IR (trade name: Nicolet (registered trademark) iS10, manufactured by Thermo Fisher Scientific Inc.) to check the height of a absorbance peak at 908 cm−1 due to the glycidyl group in the infrared absorption spectrum.

As a result, no absorbance peak at 908 cm−1 was observed by FT-IR.

<Step (C): Introduction Reaction of Glycidyl Group>

150 g of the carrier $2 was weighed onto a glass filter and thoroughly cleaned with dimethylsulfoxide. After cleaning, the carrier $2 was placed in a separable flask, 262.5 g of dimethyl sulfoxide and 150 g of epichlorohydrin were added, the resulting mixture was stirred at room temperature, 37.5 ml of a 30% sodium hydroxide aqueous solution (manufactured by KANTO CHEMICAL CO., INC.) was further added, and the resulting mixture was heated to 30° C. and stirred for 6 hours. After completion of the reaction, the porous particle was transferred onto a glass filter and thoroughly washed with water, acetone, and water in the order presented to obtain 180 g of a porous particle into which a glycidyl group had been introduced (carrier γ2).

The introduction density of the glycidyl group in the obtained carrier γ2 was measured in the same manner as in Example 1. As a result, the density of the glycidyl group was 900 μmol/g.

<Step (D): Introduction Reaction of Polyol>

150 g of the carrier γ2 was weighed onto a glass filter and thoroughly cleaned with diethylene glycol dimethyl ether. After cleaning, the carrier γ2 was placed in a 1 L separable flask, 150 g of diethylene glycol dimethyl ether and 150 g (5760 mol % based on the glycidyl group) of ethylene glycol (log P=−1.36) were placed in the separable flask, and stirring and dispersion were carried out. After that, 1.5 mL of a boron trifluoride diethyl ether complex was added, the temperature was raised to 80° C. while stirring at 200 rpm, and the resulting mixture was subjected to the reaction for 4 hours. The mixture was cooled, and then the reaction product was collected by filtration and washed thoroughly with water to obtain 152 g of a polyol-introduced porous particle (carrier δ2). The carrier δ2 was classified into 16 to 37 μm using a sieve to obtain 140.5 g of a packing material 2.

The alkali resistance of the obtained packing material 2 was evaluated in the same manner as in Example 1. As a result, the amount of a carboxy group produced was 15.2 μmol/mL, and it was confirmed that the packing material 2 had excellent alkali resistance.

Further, the non-specific adsorption of the obtained packing material 2 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 8.814 mL, 9.635 mL, 9.778 mL, 10.37 mL, 10.898 mL, and 12.347 mL, and it was confirmed that there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that no non-specific adsorption was induced.

A packing material 8 was obtained in the same manner as in Example 1 except that 150 g of ethylene glycol was used instead of 1,4-butanediol as an alkylene group-introducing agent.

The alkali resistance of the obtained packing material 8 was evaluated in the same manner as in Example 1. As a result, the amount of a carboxy group produced in the packing material 8 was 108.4 μmol/mL, resulting in poor alkali resistance.

Further, the non-specific adsorption of the obtained packing material 8 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 9.708 mL, 9.8946 mL, 10.6452 mL, 11.5374 mL, and 12.1656 mL, and it was confirmed that there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that no non-specific adsorption was induced.

Example 3

A carrier γ2 was obtained in the same manner as in Example 2.

150 g of the obtained carrier γ2 was weighed onto a glass filter and thoroughly cleaned with diethylene glycol dimethyl ether.

After cleaning, the porous particle was placed in a 1 L separable flask, 150 g of diethylene glycol dimethyl ether and 150 g of polyethylene glycol #200 (manufactured by KANTO CHEMICAL CO., INC., average molecular weight of 190 to 210, log P is unclear, but the close compound tetraethylene glycol (Mw of 194) has a log P of −2.02) (1790 mol % based on glycidyl group) were placed in the separable flask, and stirring and dispersion were carried out.

After that, 1.5 mL of a boron trifluoride diethyl ether complex was added, the temperature was raised to 80° C. while stirring at 200 rpm, and the resulting mixture was subjected to the reaction for 4 hours.

The mixture was cooled, and then the reaction product was collected by filtration and washed thoroughly with water to obtain 152 g of a porous particle into which a polyol had been introduced (carrier 63).

The carrier δ3 was classified into 16 to 37 μm using a sieve to obtain 140.5 g of a packing material 3.

The alkali resistance of the obtained packing material 3 was evaluated in the same manner as in Example 1. As a result, the amount of a carboxy group produced was 16.1 μmol/mL, and it was confirmed that the packing material 3 had excellent alkali resistance.

Further, the non-specific adsorption of the obtained packing material 3 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 8.517 mL, 9.241 mL, 9.47 mL, 10.034 mL, 10.484 mL, and 11.927 mL, and it was confirmed that there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that no non-specific adsorption was induced.

A packing material 9 was obtained in the same manner as in Example 2 except that no glycidyl group was introduced and no polyol was introduced. That is, the carrier $2 obtained in the step (B) of Example 2 was used as the packing material 9.

The non-specific adsorption of the obtained packing material 9 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 8.590 mL, 10.316 mL, 9.603 mL, 10.484 mL, 13.863 mL, and 12.861 mL, and it was confirmed that there was a contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that non-specific adsorption was induced. Because of this, the alkali resistance was not evaluated.

Example 4

A packing material 4 was obtained in the same manner as in Example 3 except that 33.2 g of glycidyl methacrylate (trade name: Blemmer G (registered trademark) manufactured by NOF Corporation), 5.9 g of glycerin-1,3-dimethacrylate (trade name: NK Ester 701, SHIN-NAKAMURA CHEMICAL Co., Ltd.), 58.7 g of diethyl succinate, and 1.9 g of 2,2′-azobis(2,4-dimethylvaleronitrile) were used to provide an oil phase. The amount of glycidyl methacrylate used was 90.0 mol % based on the total amount of the monomers, and the amount of glycerin-1,3-dimethacrylate used was 10.0 mol % based on the total amount of the monomers.

The alkali resistance of the obtained packing material 4 was evaluated in the same manner as in Example 1. As a result, the amount of a carboxy group produced was 11.5 μmol/mL, and it was confirmed that the packing material 4 had excellent alkali resistance.

Further, the non-specific adsorption of the obtained packing material 4 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 7.52 mL, 8.214 mL, 8.451 mL, 9.062 mL, 9.511 mL, and 11.915 mL, and it was confirmed that there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that no non-specific adsorption was induced.

A packing material 10 was obtained in the same manner as in Example 1 except that 150 g (480 mol % based on glycidyl methacrylate) of 1,10-decanediol was used instead of 1,4-butanediol as an alkylene group-introducing agent.

The non-specific adsorption of the obtained packing material 10 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 9.991 mL, 10.15 mL, 10.063 mL, 10.691 mL, 12.172 mL, and 11.531 mL, and it was confirmed that there was a contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that non-specific adsorption was induced. Because of this, the alkali resistance was not evaluated.

Example 5

A packing material 5 was obtained in the same manner as in Example 3 except that 21.5 g of glycidyl methacrylate (trade name: Blemmer G (registered trademark) manufactured by NOF Corporation), 17.6 g of glycerin-1,3-dimethacrylate (trade name: NK Ester 701, SHIN-NAKAMURA CHEMICAL Co., Ltd.), 58.7 g of diethyl succinate, and 1.9 g of 2,2′-azobis(2,4-dimethylvaleronitrile) were used to provide an oil phase.

The amount of glycidyl methacrylate used was 66.2 mol % based on the total amount of the monomers, and the amount of glycerin-1,3-dimethacrylate used was 33.8 mol % based on the total amount of the monomers.

The alkali resistance of the obtained packing material 5 was evaluated in the same manner as in Example 1. As a result, the amount of a carboxy group produced was 18.3 μmol/mL, and it was confirmed that the packing material 5 had excellent alkali resistance.

Further, the non-specific adsorption of the obtained packing material 5 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 8.692 mL, 9.434 mL, 9.625 mL, 10.236 mL, 10.759 mL, and 12.457 mL, and it was confirmed that there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that no non-specific adsorption was induced.

A packing material 11 was obtained in the same manner as in Example 3 except that 13.7 g of glycidyl methacrylate (trade name: Blemmer G (registered trademark) manufactured by NOF Corporation), 25.4 g of glycerin-1,3-dimethacrylate (trade name: NK Ester 701, SHIN-NAKAMURA CHEMICAL Co., Ltd.), 58.7 g of diethyl succinate, and 1.9 g of 2,2′-azobis(2,4-dimethylvaleronitrile) were used to provide an oil phase. The amount of glycidyl methacrylate used was 46.4 mol % based on the total amount of the monomers, and the amount of glycerin-1,3-dimethacrylate used was 53.6 mol % based on the total amount of the monomers.

The non-specific adsorption of the obtained packing material 11 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 8.872 mL, 10.131 mL, 9.82 mL, 10.422 mL, 12.782 mL, and 12.553 mL, and it was confirmed that there was a contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that non-specific adsorption was induced. Because of this, the alkali resistance was not evaluated.

It was confirmed that the exclusion limit molecular weights of the packing materials obtained in Examples 1 to 6 and Comparative Examples 1 to 5 were all 1,000,000 or more.

Example 6

A packing material 6 was obtained in the same manner as in Example 3 except that 33.2 g of glycidyl methacrylate (trade name: Blemmer G (registered trademark) manufactured by NOF Corporation), 5.9 g of ethylene glycol dimethacrylate (trade name: NK Ester 1G, SHIN-NAKAMURA CHEMICAL Co., Ltd.), 29.3 g of butyl acetate, 29.3 g of chlorobenzene, and 1.9 g of 2,2′-azobis(2,4-dimethylvaleronitrile) were used to provide an oil phase. The amount of glycidyl methacrylate used was 88.7 mol % based on the total amount of the monomers, and the amount of ethylene glycol dimethacrylate used was 11.3 mol % based on the total amount of the monomers.

The alkali resistance of the obtained packing material 6 was evaluated in the same manner as in Example 1. As a result, the amount of a carboxy group produced was 12.5 μmol/mL, and it was confirmed that the packing material 6 had excellent alkali resistance.

Further, the non-specific adsorption of the obtained packing material 6 was evaluated in the same manner as in Example 1. As a result, the elution volumes of the samples were 9.613 mL, 10.427 mL, 10.444 mL, 11.066 mL, 11.582 mL, and 12.575 mL, and it was confirmed that there was no contradiction between the order of the molecular weights of the samples and the order of the elution volumes thereof and that no non-specific adsorption was induced.

A packing material 12 was obtained in the same manner as in Example 3 except that 37.1 g of glycidyl methacrylate (trade name: Blemmer G (registered trademark) manufactured by NOF Corporation), 2.0 g of glycerin-1,3-dimethacrylate (trade name: NK Ester 701, SHIN-NAKAMURA CHEMICAL Co., Ltd.), 58.7 g of diethyl succinate, and 1.9 g of 2,2′-azobis(2,4-dimethylvaleronitrile) were used to provide an oil phase. The amount of glycidyl methacrylate used was 96.7 mol % based on the total amount of the monomers, and the amount of glycerin-1,3-dimethacrylate used was 3.3 mol % based on the total amount of the monomers.

Packing into a stainless steel column using the obtained packing material 12 was attempted. However, the back pressure was high, making liquid feeding difficult, and this made it impossible to carry out the packing. Because of this, neither of the evaluations was able to be carried out.

Results of the above Examples and Comparative Examples are shown in Table 1.

From the above results, by adopting the configuration of the present invention, a packing material having suppressed non-specific adsorption and high alkali resistance can be obtained.

When no hydrophobic portion is provided or when the alkylene chain is short, the alkali resistance is low as shown in Comparative Examples 1 and 2. In addition, it was found that when the alkylene chain is too long or when no hydrophilic portion is provided, the hydrophobicity is strong, and non-specific adsorption is induced as shown in Comparative Examples 3 and 4. In addition, in Comparative Example 5 having many repeating units derived from a polyfunctional monomer, it was found that non-specific adsorption was induced, and in Comparative Example 6 having fewer repeating units derived from a polyfunctional monomer, it was found that the back pressure applied to the apparatus was high, making column packing difficult.

TABLE 1
Amount of
carboxy
Degree ofgroup
PolyfunctionalcrosslinkingNon-specificproduced
Monomer[mol %]Alkylene groupPolyoladsorption5)[μmol/mL]
Ex. 1GDMA1)20.2Butylene groupSorbitol21
Ex. 2GDMA20.2Cyclohexane-1,4-dimethyleneEG3)15.2
group
Ex. 3GDMA20.2Cyclohexane-1,4-dimethylenePEG2004)16.1
group
Ex. 4GDMA10Cyclohexane-1,4-dimethylenePEG20011.5
group
Ex. 5GDMA33.8Cyclohexane-1,4-dimethylenePEG20018.3
group
Ex. 6EDMA2)11.3Cyclohexane-1,4-dimethylenePEG20012.5
group
Comp.GDMA20.2Sorbitol120.3
Ex. 1
Comp.GDMA20.2Ethylene groupEG108.4
Ex. 2
Comp.GDMA20.2Cyclohexane-1,4-dimethyleneX
Ex. 3group
Comp.GDMA20.2Decanylene groupSorbitolX
Ex. 4
Comp.GDMA53.6Cyclohexane-1,4-dimethylenePEG200X
Ex. 5group
Comp.GDMA3.3Cyclohexane-1,4-dimethylenePEG200Unmeasurable
Ex. 6group
1)GDMA: Glycerin-1,3-dimethacrylate
2)EDMA: Ethylene glycol dimethacrylate
3)EG: Ethylene glycol
4)PEG200: Polyethylene glycol #200
5)◯: No non-specific adsorption, X: Non-specific adsorption

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Patent 2024
A 300 Acetone Adsorption Alkalies Anabolism Aprotinin boron trifluoride Buffers butyl acetate butylene Butylene Glycols chlorobenzene COMP protocol Cyclohexane cyclohexanedimethanol diethylamine diethyl succinate diglyme Epichlorohydrin Esters Ethanol ethylene dimethacrylate Ethylenes Ethyl Ether Filtration G 130 gamma-Globulin Gel Chromatography Glycerin glycidyl methacrylate Glycol, Ethylene High-Performance Liquid Chromatographies Hydrochloric acid Hydrolysis Nitrogen Polyethylene Glycols Polymers polyol Polyvinyl Alcohol potassium bromide Potassium Chloride potassium hydroxide Pressure Ribonucleases Sodium Hydroxide sodium phosphate Solvents Sorbitol Stainless Steel Sulfoxide, Dimethyl tetraethylene glycol Thyroglobulin Titrimetry Uridine
Not available on PMC !

Example 37

To improve inhibition potency relative to FAAH, various portions of the t-TUCB molecule were modified to identify potential FAAH pharmacophores. The 4-trifluoromethoxy group on t-TUCB was modified to the unsubstituted ring (A-3), 4-fluorophenyl (A-2) or 4-chlorophenyl (A-26). Potency on both sEH and FAAH increased as the size and hydrophobicity of the para position substituent increased, with 4-trifluoromethoxy being the most potent on both enzymes. Substituting the aromatic ring for a cyclohexane (A-3) or adamantane (A-4) resulted in a complete loss in activity against FAAH. Results are summarized in Table 1 below.

TABLE 1
Modification of the 4-trifluoromethoxy group of t-TUCB
[Figure (not displayed)]
Stereo-IC50 (nM)
R2—N(R3)—L1chemistryhsEHhFAAH
t-TUCB[Figure (not displayed)]
[Figure (not displayed)]
trans0.8140
A1-[Figure (not displayed)]
[Figure (not displayed)]
trans309,200
A-2[Figure (not displayed)]
[Figure (not displayed)]
trans184,600
A-26[Figure (not displayed)]
[Figure (not displayed)]
trans7380
A-3[Figure (not displayed)]
[Figure (not displayed)]
trans6>1,000
A-4[Figure (not displayed)]
[Figure (not displayed)]
trans3>10,000
A-10[Figure (not displayed)]
[Figure (not displayed)]
81,800

Next, the center portion of the molecule was modified to further investigate the specificity of t-TUCB on FAAH. Switching the cyclohexane linker to a cis conformation (A-5) resulted in a 20-fold loss of potency while removing the ring and replacing it with a butane chain (A-6) resulted in a completely inactive compound. While this suggests the compound must fit a relatively specific conformation in the active site to be active, we found the aromatic linker had essentially the same potency on FAAH (A-7). Although many potent urea-based FAAH inhibitors have a piperidine as the carbamoylating nitrogen, the modification to piperidine here reduced potency 13-fold. Results are summarized in Table 2 below.

TABLE 2
Modification of the central portion of t-TUCB
[Figure (not displayed)]
Stereo-IC50 (nM)
R2—N(R3)—L1chemistryhsEHhFAAH
t-TUCB[Figure (not displayed)]
[Figure (not displayed)]
trans0.8140
A-5[Figure (not displayed)]
[Figure (not displayed)]
cis22,800
A-6[Figure (not displayed)]
[Figure (not displayed)]
15>10,000
A-7[Figure (not displayed)]
[Figure (not displayed)]
7170

Since none of the modifications at this point improved potency towards FAAH, we focused on the benzoic acid portion of the molecule as shown in Table 3. To determine the importance of the terminal acid, the corresponding aldehyde (A-20) and alcohol (A-24) in addition to the amide (A-19) and nitrile (A-11) were tested. While the amide had slightly improved potency, the more reduced forms of the acid (A-20 and A-24) and amide (A-11) had substantially less activity on FAAH. Converting the benzoic acid to a phenol (A-21) increased potency while the anisole (A-22) was completely inactive. Since the amide and acid appeared to be active, the amide bioisostere oxadiazole (A-25) was tested and had 38-fold less potency than the initial compound.

TABLE 3
Modification of the benzoic acid portion of t-TUCB
[Figure (not displayed)]
IC50 (nM)
R1hsEHhFAAH
t-TUCB[Figure (not displayed)]
0.8140
A-11[Figure (not displayed)]
5>10,000
A-19[Figure (not displayed)]
270
A-20[Figure (not displayed)]
41,100
A-24[Figure (not displayed)]
35,800
A-21[Figure (not displayed)]
2120
A-22[Figure (not displayed)]
3>10,000
A-25[Figure (not displayed)]
45,300

Since the substrates for FAAH tend to be relatively hydrophobic lipids, we speculated that conversion of the acid and primary amide to the corresponding esters or substituted amides would result in improved potency. The methyl ester (A-12) had 4-fold improved potency relative to the acid. Improving the bulk of the ester with an isopropyl group (A-13) results in a 11-fold loss in potency relative to the methyl ester. However, the similar potency of the benzyl ester (A-14) to the methyl ester demonstrates the bulk but not the size affects potency. Reversing the orientation of the ester (A-23) reduces the potency 3.4-fold. Relative to the primary amide, the methyl (A-18), ethanol (A-15) and glycyl (A-16) amides were all slightly less potent; however, the benzyl amide (A-27) was substantially less potent (16-fold). Generating the methyl ester of the glycyl amide (A-17) increased the potency 4-fold compared to the corresponding acid.

TABLE 4
Potency of ester and amide conjugates of t-TUCB
[Figure (not displayed)]
IC50 (nM)
R1hsEHhFAAH
t-TUCB[Figure (not displayed)]
0.8140
A-12[Figure (not displayed)]
735
A-13[Figure (not displayed)]
5400
A-14[Figure (not displayed)]
324
A-23[Figure (not displayed)]
4120
A-18[Figure (not displayed)]
2170
A-15[Figure (not displayed)]
2100
A-16[Figure (not displayed)]
2130
A-17[Figure (not displayed)]
330
A-27[Figure (not displayed)]
51,100

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Patent 2024
Acids Adamantane Aldehydes Amides anisole Benzoic Acid Butanes Cyclohexane Dietary Fiber Enzymes Esters Ethanol inhibitors Lipids Nitriles Nitrogen Oxadiazoles Phenol piperidine Psychological Inhibition SOCS2 protein, human Urea

Example 13

Complex Em7-s*:

[Figure (not displayed)]

0.90 g (2.7 mmol) of 5-methoxy-1,3,4-triphenyl-4,5-dihydro-1H-1,2,4-triazole C1 are heated to 90° C. under reduced pressure for 20 h. After cooling to room temperature, first 800 ml of anhydrous toluene and then 0.99 g (0.9 mmol) of chloro dimer D2 are added. The mixture is stirred under reflux for 3 h. The precipitate formed is filtered off. The filtrate is washed successively with 3×50 ml of saturated NaHCO3 solution and 1×50 ml of distilled water, dried over MgSO4 and freed of the solvent under reduced pressure. The residue is purified by column chromatography (cyclohexane/acetone=2/1). As well as 50 mg of the complex Em6-s, 150 mg of the complex Em7-s* are obtained.

1H NMR (CD2Cl2, 500 MHz):

δ=3.86 (s, 3H), 5.95 (bd, 3JH,H=7.3 Hz, 2H), 6.23 (bd, J=1.4 Hz, 1H), 6.38 (bt, 3JH,H=7.3 Hz, 1H), 6.44 (bd, 3JH,H=7.3 Hz, 1H), 6.54 (bt, 3JH,H=7.5 Hz, 1H), 6.61-6.67 (m, 4H), 6.78-6.91 (m, 5H), 6.96 (bt, 3JH,H=7.5 Hz, 1H), 7.07-7.13 (m, 4H), 7.19-7.36 (m, 12H), 7.53 (bd, 3JH,H=7.0 Hz, 1H), 7.76 (bd, 3JH,H=7.3 Hz, 1H).

Photoluminescence (in a film, 2% in PMMA):

λmax=482, 508 nm, CIE: (0.24; 0.40)

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Patent 2024
1H NMR Acetone Bicarbonate, Sodium carbene Chromatography Cyclohexane Polymethyl Methacrylate Pressure Solvents Sulfate, Magnesium Toluene Triazoles

Example 13

To Compound A (0.10 g) was added cyclohexane (5 ml), and the mixture was heated to dissolve the compound. The clear solution was cooled at room temperature overnight. Solid material which appeared to the naked eye to be crystalline formed in the solution. This material was collected by filtration and dried at room temperature under vacuum to give solid Compound A.

Solid-state CP/MAS 13C NMR of the crystalline material yielded a spectrum having the following chemical shifts (δc in ppm, unrounded): 15.356, 14.775, 29.061, 25.940, 52.340, 49.360, 43.368, 39.70438.721, 45.819, 44.950, 65.646, 64.006, 175.093.

ATR-FT-IR yielded a spectrum having the following absorption peaks (cm−1, unrounded): 668, 682, 707, 749, 774, 809, 824, 862, 945, 988, 1027, 1065, 1110, 1146, 1195, 1279, 1294, 1351, 1448, 1468, 1676, 2735, 2792, 2816, 2827, 2851, 2900, 2922, 2941.

This form is defined as Form II because of characteristic peaks in CP/MAS 13C NMR and ATR-FT-IR.

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Patent 2024
Carbon-13 Magnetic Resonance Spectroscopy Cyclohexane Filtration fluoromethyl 2,2-difluoro-1-(trifluoromethyl)vinyl ether Vacuum

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