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Dimethyl sulfide

Dimethyl sulfide is a volatile organic compound with the chemical formula CH3SCH3.
It is a colorless liquid with a distinctive unpleasant odor, often described as resembling rotten cabbage or garlic.
Dimethyl sulfide is naturally produced by the anaerobic decomposition of organic matter containing sulfur, such as in marine environments.
It has a variety of industrial and research applications, including use as a solvent, a reagent in organic synthesis, and a flavor additive.
Researchers studying dimethyl sulfide may utilize PubCompare.ai, an AI-driven platform, to optimize their research by easily locating protocols from literature, preprints, and patents, while utilizing AI-driven comparisons to identify the most accurate and reproducible protocols and products.
This innovative tool can help streamline dimethyl sulfide research and discovery.

Most cited protocols related to «Dimethyl sulfide»

The CHME-5 cell line was created by transfecting human fetal microglia with the large T antigen of the simian virus 40 (Janabi et al, 1995 (link)). Cells were maintained in Dulbecco’s minimal essential medium, high glucose (DMEM HG) supplemented with 5% FBS and 1% penicillin/streptomycin based on previous studies (Cox et al, 2009 (link)).
For transfection, cells were plated in clear or opaque 96 well plates (Corning Costar, Sigma Aldrich) at 8×104 cells/well and transfected 14–16 h post-plating using Lipofectamine 2000 (Invitrogen, CA). For luciferase experiments, pLTRC-Luc-EGFP and Tat expressing plasmids were kept constant and, 4 h after transfection, METH was added at indicated concentrations. Cells were assayed 24 h post-transfection unless otherwise noted.
For obtaining HIV-latently infected CHME-5, cells were plated on a 6-well plate at a density of (1×106 cells/well) for 48 h prior to infection with vesicular stomatitis virus G-(VSVG) pseudotyped HIVs bearing a fragment of HIV-1pNL4-3, containing Tat, Rev, Env, and Vpu, cloned into the pHR' backbone (Dull et al, 1998; Pearson et al, 2008), plus Nef adjacent to the reporter gene d2E green fluorescence protein (GFP) inserted next to Env. The viral particles were produced by the triple transfection of 293T cells using lipofectamine, as described previously (Kim et al, 2006 (link)), and the vector titer was determined by the infection of 1×106 CHME-5 cells with a serial dilution of the harvested medium supernatant. Briefly, the plate containing cells and virus was spinoculated in a swing-bucket centrifuge at 3000 × g for 1.5 h at room temperature, and incubated at 37°C in 5% CO2 for 48 h prior to trypsin treatment and fluorescence-activated cell sorting (FACS). GFP+ cells were further cultured and allowed to enter into a latent state (GFP expression below 5%) for four weeks. Latency of CHME-5/HIV cells was characterized by re-activating HIV expression (GFP; see below) and evaluating nuclear translocation of NF-κB p65 and two of its phosphorylated forms (S536 and S468) by Western blot (see below) in the presence of TNFα (50 ng/mL) for 0.5, 2, 4, 8, and 16 h. Latent CHME-5/HIV cells were then untreated or treated with increasing concentration of METH (0, 50 and 300 µM). GFP fluorescence was imaged using identical acquisition setting among groups within a given experiment. Images were acquired using a Nikon TE2000 inverted scope equipped with a DS-QiMc camera and controlled by NIS Elements software (Nikon). Again, treatment with 50 ng/mL TNFα (Pearson et al, 2008) was used as a positive control for reactivation. For testing NF-κB dependence of METH-mediated activation of HIV, CHME-5/HIV cells were pre-treated for 1 h with either 100 µM of IKKγ NEMO binding domain inhibitory peptide or equivalent amount of the control peptide (Imgenex, CA) dissolved in dimethyl sulfide (DMSO) prior to incubation with 600 µM of METH for 16 h.
Publication 2012
The protein samples used in electron
transfer and in vitro cysteine desulfurase assay
and Fe–S cluster reconstitution experiments were prepared in
an anaerobic
chamber (Coy Laboratory) with samples buffer-exchanged extensively
with anaerobic HN buffer prior to the experiments. The reaction volumes
in all the experiments were kept to 1 mL. A UV-1700 UV/visible spectrophotometer
(Shimadzu, Kyoto, Japan)
with a temperature control unit was used to collect the spectra, and
UVProbe version 2.21 (Shimadzu) was used to collect and analyze the
data.
Electron transfer from re-FDX1 or re-FDX2 to the [Acp]2:[ISD11]2:[NFS1]2 complex was monitored
as follows. re-FDX1 or re-FDX2 (25 μM) was mixed with 25 μM
[Acp]2:[ISD11]2:[NFS1]2, and 125
μM l-cysteine was added to initiate the reaction. Samples
were then transferred
to 1 cm path-length quartz cuvettes, sealed with rubber septa, and
UV/vis
spectra were collected at 25 °C. Control experiments without l-cysteine were also conducted.
The cysteine desulfurase
assay reaction mixtures (300 μL in HN buffer) contained 1 μM
[Acp]2:[ISD11]2:[NFS1]2 and 50 μM l-cysteine. The reductant was 10 μM re-FDX1, 10 μM
re-FDX2, 10 μM DTT, or 1 mM DTT. The l-cysteine was
added
last to initiate the reaction. One or more of
the following components were added to assess their effects on sulfide
production: 10 μM ISCU, 10 μM FXN, and 50 μM Fe2(NH4)2(SO4)2.
After anaerobic incubation for 20 min at room temperature, the
reaction mixture was diluted to 800 μL, and 100 μL of
20 mM N,N-dimethyl-p-phenylenediamine in 7.2 M HCl and 100 μL of 30 mM FeCl3 in 1.2 M HCl were added to quench the reaction and convert
sulfide to methylene blue. The quenched reaction mixture was incubated
for 15 min at room temperature, and then the absorbance at 670 nm
was measured and used to estimate the amount of sulfide by comparison
to a standard curve obtained from known concentrations of Na2S.
The in vitro Fe–S cluster reconstitution
assays were performed as follows. Reaction
mixtures (1 mL) prepared in the anaerobic chamber contained 25 μM
re-FDX1 or re-FDX2, 0.5 μM [Acp]2:[ISD11]2:[NFS1]2, 25 μM ISCU, and 125 μM Fe2(NH4)2(SO4)2. l-cysteine (final concentration of 125 μM) was added to initiate
the experiment. Samples were then transferred
to 1 cm path-length quartz cuvettes, sealed with rubber septa, and
UV/vis
spectra were collected at 25 °C. Control experiments were conducted
without l-cysteine.
Publication 2016
Buffers Cysteine cysteine desulfurase Electron Transport m-phenylenediamine Methylene Blue Proteins Quartz Reducing Agents Rubber sodium sulfide Sulfides sulofenur

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Publication 2012
acetonitrile Biological Assay Electron Spin Resonance Spectroscopy High-Performance Liquid Chromatographies Microwaves Peroxide, Hydrogen Phenol Sulfides Sulfites Sulfoxide, Dimethyl Toluene
The histone proteins were expressed and purified as previously described.21 (link) H3K56C/C110A double mutant was used for acetylating histone H3 in a fully unfolded state. Acetylation at H3K56 (H3K56ac) was through thiol–ene coupling between cysteine thiol and N-vinylacetamide (NVA), which is functionally equivalent to the natural acetylation at histone.22 See Figure S1 for the mass-spectrometric analysis to confirm acetylation. The H3 K56C/C110A double mutant was dissolved in a buffer of 200 μL total volume containing 0.2 M sodium acetate (pH 4), 6 M guanidine–HCl, 7 mM L-glutahione, 50 mM N-vinylacetamide, 100 mM dimethyl sulfide, and 5 mM VA-044 (2,2′-[azobis(dimethylmethlene)]bis(2-imidazoline)-dihydrochoride), resulting in the final protein concentration of 1 mM. The reaction mixture was incubated for 2 h at 70 °C and dialyzed against deionized water and then lyophilized overnight for storage at −80 °C.
Publication 2015
2-imidazoline Acetylation Buffers Cysteine dimethyl sulfide Guanidine Histone H3 Histones Mass Spectrometry Proteins Sodium Acetate Sulfhydryl Compounds
Gaseous multi-compound calibration mixtures were prepared from pure liquid substances. The majority of them were purchased from Sigma-Aldrich (Austria); 2-methyl 2-propenal (95%), 2-methyl propanal (99.5%), ethyl methyl sulfide (95.5%), 3-methyl butanal (97%), 2-pentanone (99%), n-propyl acetate (98%), 3-methyl thiophene (98%), n-hexanal (98%), isoprene (99%) and 2-heptanone (98%). Moreover, dimethyl sulfide (99%), n-butyl acetate (99.7%), benzaldehyde (99%) and 2-methyl butanal (99%) were obtained from Fluka (Switzerland), whereas n-propyl propionate (98%) was provided by SAFC (USA). 3-Octanone (99%) was purchased from Acros Organic (Belgium), 3-heptanone (98%) from Alfa Aesar (USA), 2-methyl-5-(methylthio) furan (99%) from Chemos (Germany) and 2-nonanone (98%) from Merck Schuchardt (Germany).
Gaseous calibration mixtures were produced by means of a GasLab calibration mixtures generator (Breitfuss Messtechnik, Germany). The GasLab unit consists of an integrated zero air generator, a 2-stage dynamic injection module for evaporating a liquid and diluting it with zero air, and a humidification module enabling the preparation of gas mixtures at well-defined humidity levels (up to 100% relative humidity (RH) at 37°C). When using pure liquid substances GasLab is able to produce a flow of up to 10 L/min of complex trace gas mixtures diluted in dry or humidified zero air containing from 10 ppb to 100 ppm of each solute. However, for the goals of this study, pure substances were additionally diluted (1:2000–1:3000) with distilled water prior to evaporation in order to reduce the resulting concentration levels. Effectively, humid gas mixtures (100% RH at 37°C) with volume fractions ranging from approximately 0.04 to 350 ppb were used during calibration and validation. The calibration mixtures were sampled and analyzed using identical conditions as in the case of head-space measurements of cell cultures and blanks (i.e. volume of 200 ml at a flow rate of 10 ml/min at 37°C).
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Publication 2013
2-heptanone 2-nonanone 2-pentanone 3-octanone Acrolein benzaldehyde butyl acetate butyraldehyde Cell Culture Techniques Cephalometry Complex Mixtures dimethyl sulfide ethyl-n-butyl ketone ethylmethyl sulfide furan Humidity isoprene n-hexanal propionaldehyde Propionate propyl acetate Thiophene

Most recents protocols related to «Dimethyl sulfide»

The K2S6 solution for adsorption measurements was prepared by mixing potassium sulfide (K2S) and sulfur with a molar ratio of 1:5 in dimethyl ether (DME). 5 mg WSA-W2C@NC, W2C@NC, and NC were added into the 2 ml 0.02 M K2S6 solution, respectively, with the blank K2S6 solution as a reference.
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Publication 2024
The concentrations of VSCs (hydrogen sulfide [H2S], methyl mercaptan [CH3SH], and dimethyl sulfide [(CH3)2SH]) were measured by gas chromatography using an Oral Chroma device (CHM-2; Nissha FIS, Inc., Abimedical Corporation, Osaka, Japan). Prior to the assessment, participants were instructed to keep their mouths closed for at least 15 minutes. Intraoral gas was collected using a 1.0-cc syringe inserted deep into the slightly closed mouth, with participants breathing only through the nose. After 1 minute, the investigator pushed and pulled the syringe piston twice and injected the collected gas into the device injector for analysis. Participants with a VSC value of H2S ≥ 1.5 ng/10 mL or CH3SH ≥ 0.5 ng/10 mL were considered to have halitosis.[40 (link),41 (link)] This assessment was conducted at baseline and during weeks 2 and 4.
Publication 2024

We plan to measure the changes in volatile sulfur compounds, such as hydrogen sulfide, methyl mercaptan, and dimethyl sulfide with gas chromatography-mass spectrometry (GC/MS) at the same time points as the primary endpoint. It is an instrumental technique comprising a gas chromatograph coupled to a mass spectrometer, which allows complex mixtures of chemicals to be separated, identified and quantified. Calibration will be performed with a gas mixture produced by Linde (100 ppb H2S, 500 ppb CH3SH, 1000 ppb (CH3)2S). Samples will be collected in Teflon-coated bags and delivered to the measurement site immediately after sampling.

Self-perceived halitosis. We will collect these data on a visual analog scale (Slider (RedCAP), visual analog scale coded as values 0–100) at the time mentioned above.

Side effects. (e.g., tooth discoloration, signs of allergic reactions, subjective experiences: unpleasant taste, false taste or burning sensation, pain, and changes in salivary flow).

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Publication 2024
Iron content of the purified enzyme was determined using a colorimetric assay with ferrozine (Fish, 1988) using ferrozine (Sigma-Aldrich, Merck KGaA, Darmstadt, Germany). The color change was measured at 593 nm. A standard of 0 to 200 µM ammonium iron sulfate hexahydrate was used to calculate the amount of iron in the samples.
The sulfur content of the purified enzyme was determined using a colorimetric assay [52 (link)] using N,N-dimethyl-p-phenylenediamine (DMPD) HCl. The sodium sulfide standard was made freshly every time from an anaerobic 1 mM stock solution and the samples were taken freshly from an anoxically stored solution. The change in color of DMPD was measured after centrifugation at 670 nm. A standard of 0 to 200 µM sodium sulfide was used to calculate the amount of sulfur in the samples.
For the quantification of tungsten and molybdenum in the purified AOR-His, the samples were sent to Spurenanalytisches Laboratorium Dr. Baumann (Maxhütte-Haidhof, Germany) for ICP-MS.
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Publication 2024
All materials were purchased from Sigma-Aldrich
unless otherwise stated. Lead(II) oxide (PbO, 99.999%), octadecene
(ODE, 90%), bis(trimethylsilyl) sulfide (TMS, synthesis grade), and
oleic acid (OA, extra pure, Thermo Fisher Scientific) were used for
the synthesis of lead sulfide colloidal quantum dots (PbS cQDs). Zinc
acetate (Zn(CH3COO)2, 99.99%), potassium hydroxide
(KOH, 99.99%), ethanol (CH3CH2OH, dry, max.
0.01% H2O), methanol (CH3OH, ≥99.8% puriss.
p.a.), and hexane (C6H14, 95% anhydrous) were
used for the synthesis of zinc oxide colloidal quantum dots (ZnO cQDs).
1,2-Ethanedithiol (EDT, 98%) and tetrabutylammonium bromide (TBABr,
99%) were used for ligand exchange. Lithium perchlorate (LiClO4, 99.99%, dry), tetrabutylammonium perchlorate (TBAClO4, 99%), ferrocenium hexafluorophosphate (98%), acetonitrile
(MeCN, 99.8% anhydrous), propylene carbonate (PC, 99.7%, anhydrous),
dimethylformamide (DMF, 99.8%, anhydrous), dimethyl sulfoxide (DMSO,
99.9%), anhydrous, tetrahydrofuran (THF, 99.9%, anhydrous), benzonitrile
(BN, 99%), N,N-diethylacetamide
(DEA, 97%), and acetone (99.8%, anhydrous, VWR) were used for the
electrochemical and spectroelectrochemical measurements. Indium tin
oxide on glass slides (0.7 mm thick, 7–10 Ohm/Sq) was purchased
from MSE Supplies and used as substrate for the cQD films.
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Publication 2024

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More about "Dimethyl sulfide"

Dimethyl sulfide (DMS) is a volatile organic compound with the chemical formula CH3SCH3.
It is a colorless liquid with a distinctive, unpleasant odor often described as resembling rotten cabbage or garlic.
DMS is naturally produced by the anaerobic decomposition of organic matter containing sulfur, such as in marine environments.
This versatile compound has a variety of industrial and research applications.
It can be used as a solvent, a reagent in organic synthesis, and even as a flavor additive.
Researchers studying DMS may find the AI-driven platform PubCompare.ai particularly useful.
This innovative tool can help streamline DMS research and discovery by allowing scientists to easily locate protocols from literature, preprints, and patents, while utilizing AI-driven comparisons to identify the most accurate and reproducible protocols and products.
DMS is closely related to other sulfur-containing compounds like DMSO (Dimethyl Sulfoxide) and Dimethyl Disulfide.
These substances share similar properties and applications.
Additionally, DMS research may involve the use of other chemicals like Hydrochloric Acid, Acetonitrile, Penicillin/Streptomycin, and N,N-Dimethylformamide.
Subtopics related to DMS research may include the study of its natural production, its role in marine ecosystems, its potential industrial and commercial uses, and the development of improved analytical and purification methods.
Researchers may also investigate the relationship between DMS and other volatile organic compounds, such as 3-Methylbutanal and 2-Methylbutanal, which can contribute to the characteristic odor of DMS.
By leveraging the insights and tools provided by PubCompare.ai, researchers can optimize their DMS studies, leading to more efficient and impactful discoveries in this dynamic field of study.