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Hydrazide

Hydrazidies are a class of organic compounds containing the hydrazide functional group (-CONHNH2).
They are widely used in medicinal chemistry, organic synthesis, and materials science.
Hydrazides display diverse biological activities and are important building blocks for the synthesis of various heterocyclic compounds.
This MeSH term provides a concise overview of the chemical properties, applications, and research related to hydrazide compounds.
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Most cited protocols related to «Hydrazide»

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Publication 2009
A 215 Alamar Blue Biological Assay cDNA Library Cells Cell Survival Cytotoxin Fluorescence fluoromethyl 2,2-difluoro-1-(trifluoromethyl)vinyl ether Genetic Selection Hydrazide Luminescence Pharmaceutical Preparations Promega Psychological Inhibition Vero Cells
Ganglion cells were labeled by adding 4 mM Alexa Fluor 568 hydrazide (Invitrogen, Karlsruhe, Germany) to the intracellular solution during patch clamp experiments. After recording, the retina was fixed for 12–15 min with 4% paraformaldehyde in 0.1 M phosphate buffer (PB). The fixed tissue was incubated overnight at room temperature in a 1:500 anti-choline acetyltransferase antibody solution (Chemicon, Billerica, MA, USA) containing 1% Triton X-100 and 2% bovine serum albumin in PB. The tissue was subsequently washed for 30 min in PB and incubated for 2 h in 1:400 Alexa 488–conjugated secondary antibody (Invitrogen).
Confocal photomicrographs were taken with a Zeiss LSM 5 Pascal confocal microscope using a 40× oil immersion objective. Image contrast was adjusted using ImageJ (Abramoff et al., 2004 ).
Publication 2009
alexa 568 Antibodies, Anti-Idiotypic Bos taurus Buffers Cells Choline O-Acetyltransferase Hydrazide Immunoglobulins Microscopy, Confocal Myxoid Cyst paraform Phosphates Photomicrography Protoplasm Retina Serum Albumin Submersion Tissues Triton X-100

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Publication 2010
1,2-bis(2-aminophenoxy)ethane-N,N,N',N'-tetraacetic acid Action Potentials Adenosine Triphosphate, Magnesium Salt Alexa594 Bath Bicarbonate, Sodium carbogen Cold Temperature Extracellular Fluid Fluorescent Dyes gabazine gluconate Glucose HEPES Hydrazide Inositol Magnesium Chloride Molecular Probes Mus Olfactory Bulb Pharmaceutical Preparations Phosphocreatine Potassium Protoplasm Pyruvate Ringer's Solution Sodium Sodium Chloride Sucrose Tandem Mass Spectrometry
Pressurized arterioles were fixed (2% paraformaldehyde) and stained with: Alexa 633 Hydrazide (0.2 μM, Ex 633/Em 700nm; non-selective matrix staining dye), anti-elastin antibody (1° antibody dilution 1:100; 2° AB, 491/515nm) and a nuclear stain Yo-Pro-1 iodide (491/515nm) or 4′6-diamino-2-Phenylindol (DAPI, 500ng/ml, Ex: 355, Em: 400–450nm) 17 (link). A subset of vessels were stained for type I collagen using an anti-rat polyclonal antibody (Millipore; 1:1000, 1μg/ml) and a goat anti-rabbit Alexafluor 488 secondary antibody (20μg/ml).
3D confocal microscopy was used to visualize ECM within the arteriole wall. Imaging was performed using a Leica TCS-SP5 microscope in conjunction with a Leica 63X water immersion objective lens (NA 1.2) and Leica LAS AF image acquisition software. 512×512 pixel images were acquired at a resolution of 0.48 μm/pixel at 400 Hz. Line averaging (3 scans) was performed to reduce the low frequency noise. Z dimension step size was 0.05 – 0.3 μm for all z-stacks. All acquisitions represent 8-bit TIFF grey scale images. Post image acquisition analyses were performed using Image J (NIH, Bethesda, MD), Imaris (Bitplane Scientific Software, South Windsor, CT) and Image Pro (Media Cybernetics, Bethesda, MD).
See Supplement for detailed Materials and Methods including additional information relating to image acquisition and processing.
Publication 2011
Antibodies, Anti-Idiotypic Arterioles Blood Vessel Collagen Type I DAPI Dietary Supplements Elastin Goat Hydrazide Immunoglobulins Iodides Lens, Crystalline Microscopy Microscopy, Confocal paraform Rabbits Radionuclide Imaging Submersion Technique, Dilution YO-PRO 1
Experiments were conducted at room temperature (22–25°C; unless otherwise noted) using retinal slices (210 µm thick) prepared from homozygous VGLUT3 Cre/YFP mice (P17–21), as previously described (Singer & Diamond, 2003 (link); Chavez et al., 2006 (link)). For experiments involving light stimulation, tissue preparations were conducted under dim red illumination and stored in light-tight containers (to minimize rundown of the cone-driven light response); for all other experiments, tissue preparations were conducted and stored under ambient room lighting (light adapted). Mouse retinas were isolated in artificial cerebrospinal fluid (ACSF) containing (in millimolar): 119 NaCl, 26 NaHCO3, 1.25 Na2HPO4, 2.5 KCl, 2.5 CaCl2, 1.5 MgSO4, 10 glucose, 2 Na-pyruvate, 4 Na-lactate (continually bubbled with 95% O2/5% CO2). For experiments probing the excitatory synaptic mechanisms (i.e., Figs. 4 and 5), unless otherwise noted, ACSF was supplemented with the group III metabotropic glutamate receptor (mGluR) agonist L-AP4 (10 µM) to mimic dark conditions and strychnine (1 µM), SR95531 (10 µM), and methyl-(1,2,3,6-tetrahydropyridin-4-yl)phosphinic acid (TPMPA, 50 µM) to block glycine-, GABAA-, and GABACRs, respectively. For all nonsynaptic experiments (i.e., assessment of active membrane properties), ACSF was supplemented with L-AP4 (10 µM) and the 2-amino-3-(5-methyl-3-oxo-1,2- oxazol-4-yl)propanoic acid receptor (AMPAR) antagonist, 2,3-Dioxo-6-nitro-1,2,3,4-tetrahydrobenzo[f] quinoxaline −7 sulfonamide (NBQX) (10 µM). Drugs were purchased from Sigma or Tocris (St. Louis, MO) with the exception of tetrodotoxin (TTX) (Alamone Labs, Jerusalem, Israel). Fluorescent dyes were purchased from Molecular Probes (Eugene, OR). VGLUT3+ amacrine cells were visually identified for physiological recordings in retinal slices using either a modified 2PLSM (λ = 930 nm; Zeiss) or standard epifluorescence. When using two-photon laser-scanning microscopy (2PLSM) emissions from the YFP and Alexa 594 were spectrally separated into two distinct collection channels, using a combination of a 565 nm dichroic mirror and 500–550 nm and 570–640 nm band-pass filters (Chroma, Bellows Falls, VT). This allowed for near-independent control of the signals collected from the patch pipette and the cells of interest making high quality recordings relatively easy to achieve. Alternatively, short exposures (typically <30 s) of full-field epifluorescence were used to quickly identify YFP-labeled somas that could then be targeted for electrophysiological recording using infrared differential interference contrast (IR-DIC) video microscopy. Unless otherwise noted, whole-cell voltage-clamp recordings were made from VGLUT3+ amacrine cells using pipettes (~5–6 MΩ) containing (in millimolar): 100 Cs methanesulfonate, 20 tetraethylammonium-Cl, 10 HEPES, 10 EGTA, 10 Na phosphocreatine, 4 MgATP, 0.4 Na-GTP, and 0.04 Alexa 594 hydrazide (pH 7.4). Potassium-based internal for current-clamp recordings contained (in millimolar): 100 K methanesulfonate, 20 KCl, 10 HEPES, 2 EGTA, 10 Na phosphocreatine, 4 MgATP, 0.4 Na-GTP, and 0.04 Alexa 594 hydrazide (pH 7.4). The access resistance for all recordings presented in this study was ≤30 MΩ and remained uncompensated. Input resistance for VGLUT3+ amacrine cells was 1075 ± 477 MΩ (n = 10) when using the potassium-based internal and after correcting for access resistance. Recordings were made using an Axopatch 1D or Axoclamp 700B amplifier (Axon Instruments, Foster City, CA) controlled through an A/D board (Instrutech, Port Washingon, NY) by custom software written in Igor Pro (Wavemetrics, Lake Oswego, OR). All responses were collected at 20 s intervals, low-pass filtered at 5 kHz, and digitized at 10–50 kHz. Voltage steps were leak subtracted using a P/4 subtraction protocol. Isolated excitatory synaptic responses (Figs. 4 and 5) were elicited by electrical stimulation of bipolar cells in the outer plexiform layer (OPL) (~0.5–2 µA for 100–300 µs; FHC, Bowdoin, ME).
For light stimulation, full-field light stimulation was provided by a 470-nm LED (Thor Labs, Newton, NJ) directed through the epifluorescence port of the microscope, band-pass filtered between 450–490 nm, and reflected into the objective by a 510-nm dichroic mirror (Zeiss) to provide full-field illumination over the objective (water immersion 1.0 NA 40X; Zeiss) aperture (0.45 mm diameter). Photon flux at the slice was measured to be approximately 9.6 × 1018 photons/cm2/s using a DR-2000 radiometer (Gamma Scientific, San Diego, CA). To calculate changes in synaptic conductance evoked by light stimulation, we adapted methods similar to previous reports (Borg-Graham, 2001 ; Taylor & Vaney, 2002 (link); Oesch & Taylor, 2010 (link)). We illuminated the slice for 1 s while holding the cell at a series of command voltages between −90 and 10 mV by increments of 20 mV and recorded current traces as described above, with the exception that these experiments were performed at 35–37°C and 10 mM QX-314 was added to the internal solution to block Nav channels intracellularly. Offline, we subtracted the leak current after the voltage step prior to the application of light to isolate the light-evoked current and then measured the light-evoked I–V relationship every 10 ms spanning the duration of the light stimulus. We fit each I–V with a line between −90 and 10 mV to extract the slope (gT) and x-intercept (Vr) for each I–V measurement. If we assume that light-evoked currents (Ie) arise from excitatory and inhibitory synaptic inputs and obey Ohm’s law, so that Ie=ge(t)(VVe) and Ii=gi(t)(VVi), where the inhibitory, gi(t) and excitatory, ge(t) conductances are functions of time. The total light-evoked synaptic current is IT = gT(t)(VVt(t)), where gT = ge + gi. The observed synaptic reversal potential Vr(t) is a weighted sum of Ve and Vi such that, Vr(t) = (ge(t)/gT(t))Ve + (gi(t)/gT(t))Vi. Then, the excitatory and inhibitory synaptic conductances can be calculated from gT(t) and Vr(t) according to the equations: ge(t) = gT(t){Vr(t) – Vi)/(VeVi) and gi(t) = gT(t)(Vr(t) – Ve)/(ViVe). Based on the ionic concentrations used in our internal and external recording solutions, we used a value of 0 mV for Ve and −48 mV for Vi.
Electrophysiology data were analyzed using Igor Pro and Excel (Microsoft). Paired two-tailed t-tests were used to compare data sets and significance was determined as P < 0.05 (*), P < 0.01 (**), or P < 0.001 (***). Unless otherwise indicated, data are presented as mean ± S.D. and illustrated traces are averages of 5–10 responses.
Publication 2011
2,3-dioxo-6-nitro-7-sulfamoylbenzo(f)quinoxaline Adenosine Triphosphate, Magnesium Salt Alexa594 Amacrine Cells Axon Bicarbonate, Sodium Cardiac Arrest Cerebrospinal Fluid Diamond Egtazic Acid Figs Fluorescent Dyes Gamma Rays Glucose Glycine HEPES Homozygote Hydrazide Lactate Laser Scanning Microscopy Light methanesulfonate Microscopy Microscopy, Video Molecular Probes Mus Pharmaceutical Preparations Phosphinic Acids Phosphocreatine Photic Stimulation Potassium propionic acid Psychological Inhibition Pyruvate Quinoxalines QX-314 Receptors, Metabotropic Glutamate Retina Retinal Cone Singer Sodium Chloride Stimulations, Electric Strychnine Submersion Sulfate, Magnesium Sulfonamides Synaptic Potentials Tetraethylammonium Tetrodotoxin Tissue, Membrane Tissues

Most recents protocols related to «Hydrazide»

Clinical specimens from suspected TB patients were collected for preparing an acid-fast bacillus smear, and culture.[8 ] Species identification was performed using p-nitrobenzoic acid, and 2-thiophene carboxylic acid hydrazide testing. Patients with Nontuberculosis mycobacteria infection were excluded. DST for TB strains was performed using the proportion method on Löwenstein–Jensen medium, with the following concentrations of anti-TB drugs: rifampicin (RFP), 40 μg/mL; isoniazid (INH), 0.2 μg/mL; streptomycin, 4.0 μg/mL; ethambutol, 2.0 μg/mL; levofloxacin, 2.0 μg/mL; amikacin, 30.0 μg/mL; capreomycin, 40.0 μg/mL. TB strains were deemed to be resistant to a specific drug when the growth rate was ≥1% of that of the control. The standard strain H37Rv was used as an internal quality control and included for each batch of culture.
Publication 2023
2-thiophene carboxylic acid 4-nitrobenzoic acid Acids Amikacin Bacillus Batch Cell Culture Techniques Capreomycin Ethambutol Hydrazide Levofloxacin Mycobacterium Infections Patients Pharmaceutical Preparations Rifampin Strains Streptomycin
Bamboo pulp
was used as the biomass source in this study. Sodium periodate (NaIO4, 99%), alizarin red S (ARS), and brilliant cresyl blue (BCB)
were purchased from Acros Organics. (Carboxymethyl)trimethylammonium
chloride hydrazide (Girard’s Reagent T, 99%) and acid green
25 (AG25) were purchased from Sigma-Aldrich. Sodium hydroxide (NaOH,
97%), hydrochloric acid (HCl, 36.5–38%), sodium chloride (NaCl,
99%), sodium sulfate (Na2SO4, 99%), sodium phosphate
(Na3PO4, 96%), hydroxylamine hydrochloride (NH2OH·HCl, 96%), and dehydrated alcohol (CH3CH2OH, 99.5%) were purchased from Fisher Scientific. Congo red
(CR), Bismarck brown Y (BBY), and acid brown M (ABM) were purchased
from Alfa Asear. All chemicals were used as received without further
purification.
Publication 2023
Acids Alizarin Red S Brilliant Cresyl Blue Ethanol Girard's reagent T Hydrazide Hydrochloric acid Hydroxylamine Hydrochloride Sodium Chloride Sodium Hydroxide sodium metaperiodate sodium phosphate sodium sulfate
CHO-K1 (ATCC CCL-61) and mutant CHO cell lines PgsA-745 (ATCC CRL-2242), PgsB-618 (ATCC CRL-2241), PgsC-605 (ATCC CRL-2245), PgsD-677 (ATCC CRL-2244), and PgsE-606 (ATCC CRL-2246) were obtained from the American Type Culture Collection. The prostate cancer cell line DU145 was kindly provided by Professor Shoko Nishihara, Soka University. The cells were cultured in RPMI 1640 medium (Gibco, Tokyo, Japan) supplemented with 10% v/v FBS (Gibco) or CSS (Gibco), 100 U/ml penicillin G, and 100 µg/ml streptomycin. Purified chondroitin sulfate A (CSA) from whale cartilage, chondroitin sulfate C (CSC) from shark cartilage, dermatan sulfate (DS) from porcine skin, keratan sulfate (KS) from porcine nasal cartilage, and heparan sulfate (HS) from porcine kidney were purchased from PG research (NaCS-A2, NACS-C2, NADS-B2, NSKS2, and NaHS-P2, Tokyo, Japan, http://www.pg-r.com). Hyaluronic acid (HA) from Streptococcus zooepidemicus was provided by Shiseido Co. (Tokyo, Japan). Chemically modified 2-O-ΔS-heparin, 6-O-ΔS-heparin, N-ΔS-heparin, and purified HS were obtained from Iduron (DSH001/2, DSH002/6, and DSH004/NAc, Manchester, U.K.). Purified chondroitin sulfate D (CSD) from shark cartilage (NaCS-D2(Shc)) and biotinylated heparin from porcine intestine (BHHep-Na(PgI)) were obtained from PG Research. Purified chondroitin sulfate E (CSE) from squid cartilage (034-23061) was obtained from Wako Pure Chemicals (Tokyo, Japan). GAGs except for heparin were biotinylated via carboxyl or aldehyde groups by cross-linking. Reaction solutions [1 mg/ml GAG in 100 mM MES-NaOH (pH 5.3), 1.25 mM EZ-link hydrazide biotin (Thermo Fisher Scientific, Tokyo, Japan) and 125 µg/ml 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (Thermo Fisher Scientific)] were incubated at 20°C for 12 h in the dark. The solution was dialyzed against PBS.
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Publication 2023
4-nitro-4'-aminodiphenyl sulfone Aldehydes Biotin Carbodiimides Cartilage Cell Lines Cells CHO Cells Chondroitin 4-Sulfate Chondroitin 6-Sulfate chondroitin sulfate D Culture Media Dermatan Sulfate Heparin Hyaluronic acid Hydrazide Intestines Keratan Sulfate Kidney Nasal Cartilages Pigs Prostate Cancer shark cartilage extract Skin sodium bisulfide Squid Streptococcus zooepidemicus Streptomycin Sulfate, Heparan Sulfates, Chondroitin Whales
The synthesis of hydrazides (BDTC1–BDTC7) was accomplished from hydrazinylthiazole esters via commercially available solvents and reagents. The solvents and reagents were purchased from internationally well-reputed chemical suppliers; glacial acetic acid, thiosemicarbazide, 3-nitrobenzaldehyde, 2-chlorobenzaldehyde, 4-chlorobenzaldehyde (Sigma Aldrich, USA), methanol, absolute ethanol, ethyl bromopyruvate, 3-chlorobenzaldehyde, 2-bromobenzaldehyde, 4-nitrobenzaldehyde (Merck, Germany), n-hexane, acetone, ethyl acetate (Riedel-de-Haen) and hydrazine monohydrate (Dae Jung, Korea).
The synthesis was initially determined by monitoring different physical parameters, like color change, melting point (MP), and retardation factor (Rf). Different spectro-analytical methods like Fourier-transform infrared (FT-IR) spectroscopy, high-resolution mass spectrometry (HRMS), and 1H- and 13C nuclear magnetic resonance (NMR) spectroscopies were used for structural confirmation. The purity and progress of the reaction product were monitored using TLC with silica gel 60 HF-254 pre-coated aluminum sheets (Merck, Germany). The approximate MP was determined with DMP-300 (A&E Lab, UK) apparatus. The absorptions in the IR spectra were used to determine functional groups and were recorded on a FT-IR spectrophotometer using attenuated total reflectance (ATR). 1H and 13C NMR data were recorded using Bruker Advance 300 MHz and Varian VNMRS 400 MHz spectrometers. A Bruker Micro TOF-ESI system was used to obtain the mass spectrometry data.
Publication 2023
2-bromobenzaldehyde 2-chlorobenzaldehyde 3-nitrobenzaldehyde 4-chlorobenzaldehyde 4-nitrobenzaldehyde Acetic Acid Acetone Aluminum Anabolism bromopyruvate Esters Ethanol ethyl acetate Hydrazide hydrazine hydrate Infrared Spectrophotometry Magnetic Resonance Imaging Magnetic Resonance Spectroscopy Mass Spectrometry Methanol n-hexane Physical Examination Silica Gel Solvents Spectroscopy, Fourier Transform Infrared thiosemicarbazide

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Publication 2023
Biological Assay Cell Nucleus Cells DAPI Diagnosis Dyes Embryo Ethanol Extracellular Matrix Proteins Formalin Genes Hydrazide Lung Males Microscopy, Confocal Mus Paraffin Patient Holding Stretchers Reading Frames Sepharose Single-Cell RNA-Seq Tissues VPDA protocol Woman

Top products related to «Hydrazide»

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PNGase F is an enzyme that cleaves the bond between the asparagine residue and the N-acetylglucosamine residue in N-linked glycoproteins. It is commonly used in the analysis and characterization of glycoproteins.
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Sodium acetate is a chemical compound with the formula CH3COONa. It is a common salt that is widely used in various laboratory and industrial applications. Sodium acetate functions as a buffer solution, helping to maintain a specific pH level in chemical reactions and processes.
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Alexa Fluor 633 Hydrazide is a fluorescent dye used in various biological applications. It is a stable, water-soluble dye with an excitation maximum at 633 nm and an emission maximum at 647 nm. The hydrazide functional group allows the dye to be conjugated to molecules containing aldehydes or ketones.
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HEPES is a buffering agent commonly used in cell culture and biochemical applications. It helps maintain a stable pH environment for biological processes.
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NaCNBH3 is a reducing agent commonly used in organic synthesis. It functions as a mild reducing agent for the selective reduction of nitro, azido, and carbonyl groups.
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Alexa Fluor 568 hydrazide is a fluorescent dye used in biological research. It is a water-soluble dye that can be conjugated to various biomolecules, including proteins, nucleic acids, and carbohydrates. The dye has an excitation maximum at 578 nm and an emission maximum at 603 nm, making it suitable for use in fluorescence-based applications such as microscopy, flow cytometry, and immunoassays.
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Hydrazide resin is a solid-phase chromatography material used for the purification and immobilization of proteins and other biomolecules. It is composed of a polymeric support matrix with covalently attached hydrazide functional groups that can selectively bind to oxidized carbohydrates, glycoproteins, and other molecules containing aldehyde or ketone groups.
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Sequencing grade trypsin is a proteolytic enzyme used to cleave peptide bonds in protein samples, primarily for use in protein sequencing applications. It is purified to ensure high-quality, consistent performance for analytical processes.
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Alexa Fluor® 594 Hydrazide is a fluorescent dye used in various applications in life science research. It is a hydrazide derivative of the Alexa Fluor® 594 fluorophore, which has an excitation maximum of 590 nm and an emission maximum of 617 nm. The hydrazide group allows for covalent labeling of biomolecules, such as proteins and carbohydrates, through reaction with aldehyde or ketone groups.
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Alexa Fluor 488 hydrazide is a fluorescent dye used in various biological applications. It is a water-soluble, reactive dye that can be conjugated to proteins, nucleic acids, and other biomolecules. The Alexa Fluor 488 dye has an excitation maximum at 495 nm and an emission maximum at 519 nm, making it suitable for detection using standard fluorescein filter sets.

More about "Hydrazide"

Hydrazides are a class of organic compounds containing the hydrazide functional group (-CONHNH2).
These versatile molecules find wide applications in medicinal chemistry, organic synthesis, and materials science.
Hydrazides exhibit diverse biological activities and serve as important building blocks for the synthesis of various heterocyclic compounds.
The hydrazide group can be found in a variety of compounds, including PNGase F, a glycosidase enzyme used in glycobiology research, and Alexa Fluor® dyes, such as Alexa Fluor 633 Hydrazide, Alexa Fluor 568 hydrazide, and Alexa Fluor® 594 Hydrazide, which are fluorescent labels used in cellular imaging and assays.
Sodium acetate and HEPES are commonly used in buffers and solutions involving hydrazide-containing compounds, while NaCNBH3 is a reducing agent that can be used in conjunction with hydrazides for the selective modification of biomolecules.
Hydrazide resin is a solid-phase support used in the purification and immobilization of proteins and other biomolecules.
Sequencing grade trypsin is an enzyme that can cleave peptide bonds adjacent to hydrazide groups, enabling targeted protein digestion and analysis.
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Experiene the power of AI-driven optimization for your Hydrazide studies today.