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Isothiocyanate

Isothiocyanates are a class of organic compounds characterized by the presence of an -N=C=S functional group.
These versatile molecules exhibit a range of biological activities, including anti-cancer, anti-inflammatory, and antimicrobial properties.
Isothiocyanates are naturally occuring in cruciferous vegetables such as broccoli, cauliflower, and wasabi, and have been the subject of extensive research for their potential therapeutic applications.
Optimizing research on isothiocyanates can be enhanced through tools like PubCompare.ai, which help scientists locate relevant protocols from the literature, preprints, and patents, while leveraging AI-driven comparisons to identify the most effective methodologies and products.
This innovative approach can improve reproducibility and accuracy in isothiocyanate studies, accelerating discoveries in this important field of study.

Most cited protocols related to «Isothiocyanate»

The long-FFQ consisted of 172 food and beverage items and nine frequency categories, ranging from almost never to seven or more times per day (or to 10 or more glasses per day, for beverages). It asked about the usual consumption of listed foods during the previous year. The food list was initially developed according to percentage contributions based on absolute values of energy and intake of 14 target nutrients from weighed food records in 1989–19918 (link) and used for the Japan Public Health Center-based prospective Study,8 (link)12 (link) for which it was modified for middle-aged and elderly residents in a wide variety of areas of Japan. With regard to this modification, the following criteria were considered: calculation for an additional 17 nutrient items, such as fiber and folate, change of foods contributing to the absolute nutrient intake according to the updated Standard Tables of Food Composition in Japan,13 ,14 and dietary regionality and change in generation for the present cohort (data not shown). As a result, 33 foods were added, and 5 foods and beverages were excluded.15 (link) Moreover, six foods were also added to account for potential inter-individual variation in specific nutrients, such as isothiocyanate and isoflavone. With regard to alcoholic beverages, choices of intake amount were changed from the initial JPHC-FFQ.
To develop the food list for the short-FFQ, we selected and combined items and supporting questions from the original long-FFQ. We selected the three major foods and beverages that contributed to inter-individual variation for each of 40 nutrients according to a cumulative R2 for the 40 nutrients,16 based on the multiple regression coefficient with total intake of a specific nutrient as the dependent variable and its intake from each food as the explanatory variable. Inter-individual variation was calculated by gender among 45 869 men and 52 989 women who responded to the JPHC Study 10-year follow-up survey. Consequently, cumulative R2 for the nutrients ranged from 0.4 to 1.0. For potential inter-individual variation in intake of specific food groups, some foods, such as coffee, were added. Ultimately, 66 food and beverage items were selected for the short-FFQ. In this validation study, information on alcoholic beverages was substituted with those from the long-FFQ (united with overall information of lifestyle), because these questions were not included in the short-FFQ. This was because information on alcoholic beverage intake was structured in pages for lifestyle other than diet, such as smoking status and physical activity, and the reproducibility of alcoholic beverage intake was relatively high even if questionnaires were administered at a 1-year interval.17 (link),18 (link)Intakes of energy, 53 nutrients, and 29 food groups were calculated using the Standard Tables of Food Composition in Japan 2010,19 Standard Tables of Food Composition in Japan Fifth Revised and Enlarged Edition 2005 For Fatty Acids,20 and a specifically developed food composition table for isoflavones in Japanese foods.21 (link)
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Publication 2016
Aged Alcoholic Beverages Beverages Coffee Diet Eating Eyeglasses Fatty Acids Fibrosis Folate Food Isoflavones isothiocyanate Japanese Nutrient Intake Nutrients Woman
Two flowers per day from anthesis, two and three days after pollination were fixed in 4% formaldehyde freshly prepared from paraformaldehyde in 1x phosphate saline buffer (PBS) pH7.3, left overnight at 4ºC, and conserved then at 0.1% formaldehyde solution [83 (link)]. Then the pistils were dehydrated in an acetone series (30%, 50%, 70%, 90%, 100%), and embedded in Technovit 8100 (Kulzer and Co, Germany) for two days. The resin was polymerized at 4ºC, and sectioned at 4 μm thickness. Sections were placed in a drop of water on a slide covered with 2% (3-Aminopropyl) triethoxysilane - APTEX (Sigma-Aldrich), and dried at room temperature. Callose was identified with the anticallose antibody (AntiCal) that recognises linear β-(1,3)-glucan segments (anti-β-(1,3)-glucan; immunoglobulin G1), Biosupplies, Australia [49 (link)]. As a secondary antibody, Alexa 488 fluorescein isothiocyanate (FITC)-conjugated anti-mouse IgG was used (F-1763; Sigma). Additionally, a monoclonal antibody (mAbs) JIM13 [84 (link)] against AGPs glycosyl epitopes, and one mAb JIM11 [85 (link)] against extensin epitopes were obtained from Carbosource Services (University of Georgia, USA). Secondary antibodies were anti-rat IgG conjugated with the same Alexa 488 used above. Sections were incubated for 5 min in PBS pH7.3 followed by 5% bovine serum albumin (BSA) in PBS for 5 min. Then, sections were incubated at room temperature for 1h with AntiCal primary mAb, JIM13, and JIM11. After that, three washes in PBS of 5 minutes each preceded the incubation for 45 min in the dark with a 1/25 diluted secondary fluorescein isothiocyanate (FITC) conjugated with the antibody in 1% BSA in PBS, followed by three washes in PBS [83 (link)]. Sections were counterstained with calcofluor white for cellulose [86 (link)], mounted in PBS or Mowiol, and examined under a LEICA DM2500 epifluorescence microscope connected to a LEICA DFC320 camera. Filters were 355/455 nm for calcofluor white and 470/525 nm for the Alexa 488 fluorescein label of the antibodies (White Level?=?255; Black Level = 0; ϒ?=?1). Exposur (Exp) times were adapted to the best compromise in overlapping photographs for each antibody: AntiCal, Exp.?=?15.30ms (Calcofluor Exp. = 1.20ms); JIM13 Exp.?=?2.52ms (Calcofluor?=?0.41ms); JIM11, Exp. = 31.59 ms (Calcofluor Exp. = 1.40ms). Brightness and contrasts were adjusted to obtain the sharpest images with the Leica Application Suite software.
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Publication 2014
3-(triethoxysilyl)propylamine Acetone anti-IgG Antibodies Bos taurus Buffers calcofluor white callose Cellulose Contrast Media Epitopes Flowers Fluorescein Formaldehyde Formalin Glucans Immunoglobulins isothiocyanate Mice, House Microscopy Orosomucoid paraform Phosphates Pistil Pollination Resins, Plant Saline Solution Serum Albumin Serum Albumin, Bovine
A detailed protocol for DPCC isolation is available in Supplementary Material. In brief, 5 × 105 cells were cultured in 1.5 ml, treated with drug, then culture medium aspirated and cells immediately lysed on the plate by addition of 1 ml of lysis reagent (not to exceed 2 × 106 cells per 1 ml lysis solution). Several different solutions containing guanidinium isothiocyanate (GTC) proved satisfactory for cell lysis, DPCC isolation and immunodetection. One, M buffer (MB), was non-proprietary and contained 6 M GTC, 10 mM Tris–HCl (pH 6.5), 20 mM EDTA, 4% Triton X100, 1% Sarkosyl and 1% dithiothreitol; others were based on proprietary reagents, RLT Plus (Qiagen), or DNAzol® (Life Technologies/ Invitrogen), alone or in combination with 1% Sarkosyl. An aliquot of lysate (10–20%) was saved for analysis of the unfractionated extract, and nucleic acids and DPCC were precipitated from the remainder by addition of 0.5 volume of 100% ethanol followed by centrifugation. The precipitate was washed twice in 75% ethanol and immediately resuspended in 200 µl of freshly prepared 8 mM NaOH, to achieve final concentration of 20–30 µg/ml DNA. For complete solubilization, it was essential not to allow the pellet to dry. A solution of weak base has also been used by others to solubilize DNA following ethanol precipitation (17–19 ), and in our hands, it worked well. Most importantly, it preserved epitopes of Top1 and DNMT1 necessary for their recognition by antibodies. It is possible that other conditions might be better for preserving critical immuno-epitopes of other proteins.
Recovered DNA was quantified by measuring fluorescence of DNA-bound PicoGreen dye (Invitrogen), as recommended by the manufacturer. DNA recovery was 5–7 µg per 106 cells, consistent with the DNA content of 7.1 pg of DNA per human cell. DNA recovery was typically sufficiently uniform that blotting and immunodetection could proceed using identical volumes of similarly processed DNA samples, and DNA content independently determined for normalization of signal to DNA. At high DNA concentrations, solutions will be viscous and may clog membranes, which can be addressed by brief sonication (20 s at 50%). Protein assays using the BCA reagent (Pierce) showed that >98% of free protein was removed in the course of DNA adduct recovery. Significant amounts of RNA were recovered on precipitation, as evident on agarose gel electrophoresis or comparison of yields quantified by A260 and PicoGreen fluorescence. RNA was readily removed by treatment with RNase A.
Publication 2013
Tamarind (Tamarindus indica L.) seeds were obtained from Jungle Seeds, Watlington, UK) and nasturtium (Tropaeolum majus L. cv Tom Thumb) seeds from Mr. Fothergill's Seeds Ltd., Newmarket, UK. Tamarind and nasturtium seeds were imbibed for 24 h and then pieces of cotyledon parenchyma were excised, fixed and prepared for embedding in LR White resin with subsequent sectioning for indirect immunofluorescence analysis as described previously [8 (link)]. Tobacco (Nicotiana tabacum L.) and pea (Pisum sativum L.) plants were grown in a greenhouse with 16 h days and maintained between 19 and 23°C. Regions of second internodes from the top of six-week old plants were fixed, embedded in wax and sectioned as described previously [46 (link)].
In addition to LM15, three further monoclonal antibodies were used in this study using indirect immunofluorescence: CCRCM1, a mouse monoclonal antibody to a fucosylated epitope of xyloglucan [19 (link)], a gift from Dr. Michael Hahn (CCRC, University of Georgia, USA), JIM5, a rat monoclonal antibody to methyl-esterified and unesterified epitopes of HG [32 (link)] and LM6, a rat monoclonal antibody to arabinan [34 (link)]. Section pre-treatment to remove HG from cell walls involved incubation of sections with a recombinant microbial pectate lyase 10A [47 (link)] (a gift from Prof. Harry Gilbert, University of Newcastle-upon-Tyne) at 10 μg/mL for 2 h at room temperature in 50 mM N-cyclohexyl-3-aminopropane sulfonic acid (CAPS), 2 mM CaCl2 buffer at pH 10 as described [10 (link)]. The high pH of the enzyme buffer removes HG methyl esters in cell walls and results in HG being susceptible to pectate lyase degradation and also suitable for recognition by JIM5. Sections not treated with the pectate lyase were incubated for an equivalent time with the high pH buffer without enzyme and imaged as untreated controls. After enzyme or buffer treatment, sections were incubated in phosphate-buffered saline (PBS) containing 5% (w/v) milk protein (MP/PBS) and a 5-fold dilution of antibody hybridoma supernatant for 1.5 h. Samples were then washed in PBS at least 3 times and incubated with a 100-fold dilution of anti-rat IgG (whole molecule), or anti-mouse IgG, linked to fluorescein isothiocyanate (FITC, Sigma, UK) in MP/PBS for 1.5 h in darkness. The samples were washed in PBS at least 3 times and incubated with Calcofluor White (0.2 μg/mL) (Fluorescent Brightner 28, Sigma, UK) for 5 min in darkness. Samples were washed at least 3 times and then mounted in a glycerol-based anti-fade solution (Citifluor AF1, Agar Scientific, UK). Immunofluorescence was observed with a microscope equipped with epifluorescence irradiation and DIC optics (Olympus BX-61). Images were captured with a Hamamatsu ORCA285 camera and Improvision Volocity software.
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Publication 2008
Diagnostic AML blasts from patient 7 [46, XY, t(8;21)], THP-1, and Kasumi-1 cells cultured in RPMI1640 plus 10–20% FBS were treated with VPA (0.5, 0.66, and 0.5 mM, respectively) or cytarabine (1000, 900, and 100 nM, respectively) alone or in combination for 24 h (for the patient sample) or 96 h (for the cell lines). The VPA and cytarabine doses for the cell lines were IC20s, while those for patient AML blasts were ~IC50s, determined by MTT assays. The same concentrations of VPA and cytarabine were used in the rest of the studies unless specified. The cells were harvested, vigorously pipetted and triplicate samples taken to determine baseline and drug-induced apoptosis using the Apoptosis Annexin-V fluorescein isothiocyanate (FITC)/propidium iodide (PI) Kit (Beckman Coulter; Brea, CA), as previously described.29 (link) Apoptotic events were recorded as a combination of Annexin-V+/PI- (early apoptotic) and Annexin-V+/PI+ (late apoptotic/dead) events and results were expressed as percent of Annexin-V+ cells after subtracting results for untreated cells. Synergy was quantified using the cooperativity index (cooperativity index = sum of apoptosis of single agent treatment/apoptosis upon combined treatment). Cooperativity index <1, =1, or >1 is termed synergistic, additive, or antagonistic, respectively.23 (link)
Publication 2010
Annexin A5 antagonists Apoptosis Biological Assay Cell Lines Cells Combined Modality Therapy Cytarabine Diagnosis Fluorescein isothiocyanate Patients Pharmaceutical Preparations Propidium Iodide

Most recents protocols related to «Isothiocyanate»

The extraction of PEITC was performed as previously described [3 (link)]. Briefly, 5.0 g of lyophilized watercress flowers were suspended in phosphate-buffered saline (PBS; pH 7) (150 mL) containing a catalytic amount of ascorbic acid. The formed suspension was incubated at 37 °C under continuous stirring for 1 h in order to stimulate the hydrolysis of glucosinolates. The resulting solution (150 mL) was filtered over Whatman filter paper (pore size: 4.0–12 μm) and the filtrates were subsequently extracted by convectional liquid–liquid extraction using n-hexanes (3 washes × 150 mL each). Isolation and drying of the organic phase over magnesium sulphate followed by concentration to dryness under reduced pressure yielded a phenethyl isothiocyanate-enriched fraction as a viscous oil (2.1 g, 1.91 mL, yield: 42%). The yield was calculated based on the mass of dry extract.
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Publication 2024
Not available on PMC !
Guanidinium Isothiocyanate (GITC) is a chaotropic agent which disrupts cells, denatures proteins, and deactivates nucleases, thereby stabilizing the nucleic acid. Brie y, a 10 µl loop full of bacteria was suspended in 400 µl of saline and 400 µl of GITC lysis buffer (4M GITC, 25mM Tris-HCl). The suspension was vortexed for 15 sec then incubated at 56°C for 15 min on the heating block. After that (96%-100% ethanol) was added and vortexed for 15 sec, after which the lysate was transferred to a spin column and incubated at RT for 5 min. After centrifugation at 6000 x g for 1 min and the supernatant was discarded. RNA was then washed with wash buffer I (0.9 M GITC, 10 mM Tris, 20% EtOH) and wash buffer II (100 mM NaCl, 10 mM Tris-HCl, 80% EtOH). After washing, the spin column dried at 56°C for 3 min. Finally, RNA was eluted in fresh Eppendorf tubes by adding 50 µl of RNase free water into the spin column followed by centrifugation at 6000 x g for 5 min. The quality and purity of the RNA obtained was evaluated using the Qubit and Nanodrop spectrophotometer.
Publication 2024
On the 22nd day of age, 3 birds per pen (12/group) were weighted and submitted to feed restriction for 12 h to induce a gut permeability challenge. Fluorescein isothiocyanate dextran (FITC-d, 100 mg, MW 4000; Sigma-Aldrich, St. Louis, MO, USA) was utilized to assess intestinal permeability, following the method described by Baxter et al. [4 (link)]. In particular, birds were orally administered FITC-d dissolved in phosphate-buffered saline (PBS). Three additional birds per group were gavaged by PBS only and were used as serum blank controls for each group, as previously outlined [4 (link)]. In each group, subsequently, after a 2 h duration, blood samples were collected from the jugular vein and left at room temperature for 3 h before undergoing centrifugation (500× g for 15 min) to obtain the serum. The serum was then diluted with PBS (1:1 PBS), and the presence of FITC-d in the serum was quantified using a multi-mode microplate fluorescence reader (Perkin-Elmer, Waltham, MA, USA) at an excitation wavelength of 485 nm and an emission wavelength of 528 nm. The standard curve was plotted according to absorption of standards prepared by spiking FITC-d at a range of concentrations (0–0.5 μg/mL). The amount of FITC-d in the serum for each bird was reported as µg of FITC-d per milliliter of serum.
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Publication 2024
Mice were anesthetized with tribromoethanol and then transcardially perfused with 4% paraformaldehyde (PFA) (Electron Microscopy Services, Cat#15714) and 3mg/mL 70kDa fluorescein isothiocyanate–dextran (Millipore-Sigma, Cat#FD70S) in PBS. Eye globes were excised, and retinas were immediately dissected and flat mounted. Flat mounts were imaged with a Leica DMi8 inverted microscope within 30 minutes of harvest using a GFP filter by taking 10µm step z-stacked imaged to encompass the entire tissue at 10x magnification. The presence of leaks and avascular areas were recorded. Tissue integrity was assessed by bright field microscopy.
Publication Preprint 2024
The conjugates of CMCht/PAMAM-fluorescein isothiocyanate (FITC) were obtained by covalently bonding the amine group of CMCht and the isothiocyanate group of FITC (10 mg.ml -1 FITC [Sigma] in anhydrous dimethyl sulfoxide [Norconcessus] ) to form a thiourea bond [Citation23] . First, a 10 mg.ml -1 solution of CMCht/PAMAM dendrimer NPs was prepared in a carbonate-bicarbonate coupled buffer with pH 9.2. Then, a solution of FITC/dimethyl sulfoxide was added under agitation and kept in the dark at 4°C for 8 h. The FITC-labeled CMCht/PAMAM dendrimer NP solution was then dialyzed for 24 h against ultrapure water to remove unlinked FITC and filtered (pore size <220 nm) in sterile and dark conditions. The final product was obtained after freeze-drying.
Publication 2024

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FITC is a fluorescent dye used in various laboratory applications. It is a green-fluorescent dye that is commonly used for labeling and detecting biomolecules, such as proteins, antibodies, and nucleic acids. FITC emits light in the green region of the visible spectrum when excited by a suitable light source.
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DAPI is a fluorescent dye that binds strongly to adenine-thymine (A-T) rich regions in DNA. It is commonly used as a nuclear counterstain in fluorescence microscopy to visualize and locate cell nuclei.
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FITC-dextran is a fluorescent labeled dextran compound. It is a water-soluble carbohydrate polymer that is covalently linked to the fluorescent dye fluorescein isothiocyanate (FITC). FITC-dextran is commonly used as a tracer or marker in various biological applications.
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Bovine serum albumin (BSA) is a common laboratory reagent derived from bovine blood plasma. It is a protein that serves as a stabilizer and blocking agent in various biochemical and immunological applications. BSA is widely used to maintain the activity and solubility of enzymes, proteins, and other biomolecules in experimental settings.
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More about "Isothiocyanate"

Isothiocyanates are a class of organic compounds characterized by the presence of an -N=C=S functional group.
These versatile molecules, also known as ITCs, exhibit a range of biological activities, including anti-cancer, anti-inflammatory, and antimicrobial properties.
Isothiocyanates are naturally occurring in cruciferous vegetables such as broccoli, cauliflower, and wasabi, and have been the subject of extensive research for their potential therapeutic applications.
Optimizing research on isothiocyanates can be enhanced through tools like PubCompare.ai, which help scientists locate relevant protocols from the literature, preprints, and patents, while leveraging AI-driven comparisons to identify the most effective methodologies and products.
This innovative approach can improve reproducibility and accuracy in isothiocyanate studies, accelerating discoveries in this important field of study.
In the context of isothiocyanate research, other relevant terms and techniques include FACSCalibur flow cytometry, CellQuest software, FITC (fluorescein isothiocyanate) labeling, FBS (fetal bovine serum), FACSCanto II flow cytometer, DAPI (4',6-diamidino-2-phenylindole) staining, FITC-dextran uptake, and Bovine serum albumin (BSA) as a blocking agent.
These tools and methods can be leveraged to analyze the effects of isothiocyanates on cellular processes, such as apoptosis, proliferation, and signaling pathways.
By incorporating these synergistic approaches, researchers can optimize their isothiocyanate studies and drive forward the field of ITC-based therapeutics.