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Isoxazoles

Isoxazoles are a class of heterocyclic organic compounds containing a five-membered ring with one oxygen and one nitrogen atom.
These versitile compounds have a wide range of applications in medicinal chemistry, agrochemicals, and materials science.
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Most cited protocols related to «Isoxazoles»

Cyclodextrin-encapsulated 17β-estradiol (E2; Sigma, St. Louis, MO) at a dose of 0.2 mg/kg was dissolved in physiological saline in a volume of 4 ml/kg, and injected intraperitoneally (i.p.). This dose in mice facilitates object memory consolidation in the task used here (Gresack and Frick, 2004 (link), 2006 (link)). The vehicle, hydroxypropyl-β-cyclodextrin (HBC), was dissolved in an equal volume of saline and contained the same amount of cyclodextrin as E2. The MEK inhibitor SL327 (α-[Amino[(4-aminophenyl)thio]methylene]-2-(trifluoromethyl) benzeneacetonitrile; Sigma), at a dose of 30 mg/kg, was dissolved in 100% dimethyl sulfoxide (DMSO) and injected i.p. in a volume of 2.0 ml/kg. Vehicle controls received HBC or both HBC and DMSO. For intrahippocampal (IH) infusions, physiological saline or cyclodextrin-encapsulated E2 dissolved in physiological saline (5.0 μg/0.5μl) was infused at 0.5 μl/min for 1 minute.
To demonstrate that E2-induced increases in object recognition were dependent on dorsal hippocampal ERK activation, other mice received IH infusions of vehicle or the MEK inhibitor U0126 (1,4-Diamino-2,3-dicyano-1,4-bis (o-aminophenylmercapto) butadiene; 2.0 μg/μl; Sigma) concurrently with i.p. E2 injection or intracerebroventricular (ICV) infusion of bovine serum albumin-conjugated 17β-estradiol (see below) into the dorsal third ventricle. U0126 was dissolved in 100% DMSO to 4 μg/μl as a stock solution and then serially diluted in physiological saline for infusion of various doses. U0126 or vehicle (50% DMSO) were infused at a rate of 0.50 μl/min and a volume of 0.50 μl/side. Other mice received ICV infusions of vehicle or bovine serum albumin-conjugated 17β-estradiol (β-Estradiol 6-(O-carboxy-methyl)oxime; BSA-E2; Sigma). The covalent conjugation of E2 to the large BSA molecule prevents E2 from passing through the cell membrane and binding to intracellular ERs (Taguchi et al., 2004 (link)). Thus, effects of BSA-E2 should be mediated by membrane-bound ERs. BSA-E2 was dissolved in Tris-HCl to a concentration of 5.0 μM. Either 5.0 μM BSA-E2 or vehicle (Tris-HCl) was infused at a rate of 0.5 μl/min at a volume of 1.0 μl.
To demonstrate that the effects of BSA-E2 on memory and ERK activation were independent of nuclear estrogen receptors, other mice received ICV infusions of BSA-E2 conducted as described above concurrently with IH infusions of the nuclear estrogen receptor antagonist ICI 182,780 ((7a,17b)-7-[9[(4,4,5,5,5pentafluoropentyl) Sulfinyl]nonyl]estra-1,3,5(10)-triene-3,17-diol; 10 μg/μl; Sigma). ICI 182,780 is an antagonist of ERα and ERβ that impairs E2-induced ER dimerization (Weatherman et al., 2002 (link)) and translocation of ERs into the cell nucleus (Dauvois et al., 1993 (link)). If ICI 182,780 does not block the effects of BSA-E2 on memory and ERK activation, then this would indicate that these effects are mediated by membrane-associated estrogen receptors rather than nuclear receptors. Intrahippocampal infusions of ICI 182,780 were conducted at a rate of 0.5 μl/min and a volume of 0.5 μl/side, resulting in a dose of 5.0 μg/side. In other mice, ICI 182,780 was infused intrahippocampally without concurrent ICV infusion as a control due to a report that this compound in female rats can act as an estrogen receptor agonist to enhance place learning when administered in the absence of E2 (Zurkovsky et al., 2006 (link)). To compare effects of ICI 182,780 with those of traditional E2, 0.2 mg/kg E2 was administered i.p. either alone or with ICI 182,780 infused intrahippocampally. The E2 + IH ICI 182,780 group also served as a control for the effectiveness of the ICI compound in blocking the effects of traditional, non-BSA conjugated E2 on object memory consolidation and ERK activation. Vehicle controls for the aforementioned groups received ICV and IH infusions of saline or BSA dissolved in saline.
Finally, to demonstrate that the effects of BSA-E2 on memory and ERK activation involved the dorsal hippocampus, BSA-E2 was infused bilaterally into the dorsal hippocampus of another set of mice. Intrahippocampal infusions were conducted at a rate of 0.5 μl/min and at a volume of 0.5 μl/side, resulting in doses of 5.0 μM/side. As a control, these mice also received ICV infusions of vehicle (BSA dissolved in saline). Additional mice received ICV BSA-E2 + IH vehicle as a control to replicate the effects of ICV BSA-E2 observed above. As an additional method of demonstrating hippocampal involvement in the BSA-E2 effect, other mice received ICV infusions of BSA-E2 conducted as described above concurrently with IH infusions of the GABAA receptor agonist muscimol (3-Hydroxy-5-aminomethyl-isoxazole; 0.50 μg/μl dissolved in saline; Sigma). Muscimol temporarily inactivates a brain region of interest by increasing GABAergic inhibition without permanently damaging the tissue (Martin, 1991 (link)). Therefore, if muscimol interferes with the beneficial effects of ICV BSA-E2 on memory, then this would suggest critical involvement of the dorsal hippocampus in this effect. Intrahippocampal infusions of muscimol were conducted at the same rate and volume as above. Vehicle controls for all of the aforementioned groups received ICV and IH infusions of saline or BSA dissolved in saline.
Injection cannulae for IH and ICV infusions remained in place for 1 minute after infusion to prevent drug diffusion up the injection track. For behaviorally tested mice, all solutions were administered immediately after the sample phase of object recognition training.
Publication 2008
1,3-butadiene Brain Cannula carbene Cell Nucleus Cyclodextrins Diffusion Dimerization Estradiol estradiol-bovine serum albumin Estrogen Nuclear Receptor estrogen receptor alpha, human Estrogen Receptor Antagonists Females GABA-A Receptor Agonists GPER protein, human Hypromellose ICI 182780 Infusions, Intracerebroventricular Isoxazoles Memory Memory Consolidation Mus Muscimol Oximes Pharmaceutical Preparations physiology Plasma Membrane Protoplasm Psychological Inhibition Rattus Receptors, Nuclear Saline Solution Seahorses Serum Albumin, Bovine Sulfoxide, Dimethyl Tissue, Membrane Tissues Translocation, Chromosomal Tromethamine U 0126 Ventricles, Third

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Publication 2012
Anabolism Biological Assay Cloning Vectors Glutathione GPI protein, human Isoxazoles Mammals Plasmids Proteins Recombinant Proteins Resins, Plant Stress Granules Transfection

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Publication 2012
Cells Gels Glycine Isoxazoles Pellets, Drug Tissues Tromethamine
Isoflurane-anesthetized mice were transurethrally catheterized (PE10, 11 mm length) and drained of urine [7 (link)]. Fifteen minutes before instillation, mice received either HMGB1 antagonist [21 (link)], glycyrrhizin (50 mg/kg, ip; Calbiochem, Billerica, MA), glycyrrhizin vehicle control (10 μM NH4OH in sterile PBS, pH 7.4; ip), or MIF antagonist, (S,R)3-(4-hy-droxyphenyl)-4,5-dihydro-5-isoxazole acetic acid methyl ester [22 (link)] (ISO-1; 20 mg/kg, ip; EMD Bioscience, San Diego, CA; catalog 475837). Bladders were instilled with either PAR4-activating peptide (AYPGKF-NH2; 100 μM in PBS; pH 7.4, 150 μl) or a scrambled control peptide (YAPGKF-NH2; 100 μM in PBS; pH 7.4, 150 μl) and retained for 1 hour. Intravesical fluid was collected from the catheter tip, treated with protease inhibitors (Halt III; Thermo Sci., Rockford, IL), and stored at -80°C until analysis.
Twenty-four hours after instillation, mice were tested for abdominal mechanical allodynia (as above) and then anesthetized (isofluorane anesthesia). Bladders were removed, fixed in 10% formalin, and embedded in paraffin for histology (see below).
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Publication 2016
Abdomen alanyl-tyrosyl-prolyl-glycyl-lysyl-phenylalanine Anesthesia Catheters Formalin Glycyrrhizic Acid HMGB1 Protein Isoflurane Isoxazoles Mechanical Allodynia methyl acetate Mice, House Paraffin Embedding Peptides Protease Inhibitors Sterility, Reproductive Urinary Bladder Urine
We conducted live CBA for MOG antibody based on our previous reports with modification (we used anti-human IgG1 as the secondary antibody to avoid nonspecific binding8 (link),10 (link)). Briefly, full-length MOG-expressing or MOG-nonexpressing stable cell lines were incubated with a 1:16 dilution of serum and then incubated with a 1:400 dilution of Alexa Fluor 488 mouse anti-human IgG1 antibody (A10631; Thermo Fisher Scientific, Rockford, IL). After cell immunostaining, 2 investigators (R.O. and T.T.), who were blinded to patients' data, judged MOG antibody positivity by comparing the staining results of MOG-expressing and MOG-nonexpressing cells. In MOG antibody–positive samples, the antibody titers were calculated by consecutive twofold dilutions to ascertain the maximum dilution with positive staining. Simultaneously, M23-AQP4 antibody in the serum was tested by live CBA using Alexa Fluor 488 goat anti-human IgG (A11008, Thermo Fisher Scientific) as the secondary antibody. Anti-NMDA receptor (NMDAR) antibody, anti-α-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor (AMPA) antibody, anti-leucine-rich glioma-inactivated protein 1 (LGI1) antibody, anti-contactin-associated protein 2 (CASPR2) antibody, and anti-γ-aminobutyric acid receptor type B receptor (GABAB) antibody in the CSF were tested by indirect immunofluorescence using commercially available kits (Euroimmun, Lübeck, Germany).
Publication 2017
alexa fluor 488 alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid anti-IgG Antibodies, Anti-Idiotypic ANXA2 protein, human Cell Lines Cells CNTNAP2 protein, human GABA Receptor Glioma Goat Homo sapiens IgG1 Immunoglobulins Indirect Immunofluorescence Isoxazoles Leucine LGI1 protein, human Mus N-Methyl-D-Aspartate Receptors Patients Receptors, Amino Acid Serum Technique, Dilution

Most recents protocols related to «Isoxazoles»

Assay buffer was prepared utilizing phosphate-buffered saline (PBS) supplemented with 0.9 mmol/L Ca2+ and 0.5 mmol/L Mg2+, 0.1% BSA, 10 mmol/L HEPES, and 10 mmol/L glucose, pH 7.4. PBMC spin medium was procured from pluriSelect Life Science (Leipzig, Germany). The Eosinophil Isolation Kit was received from Miltenyi Biotech (Bergisch Gladbach, Germany). (S,R)-3-(4-hydroxyphenyl)-4,5-dihydro-5-isoxazole acetic acid methyl ester (ISO-1) was procured from Merck (Vienna, Austria), MIF from Peprotech (London, UK) and IL-8 and CCL11 from Immunotools (Friesoythe, Germany). PVP-free polycarbonate filters were procured from Sterlitech (Auburn, AL, USA).
All experiments involving primary cells of human peripheral blood were approved by the Institutional Review Board of the Medical University of Graz (EK 17–291 ex 05/06). Briefly, peripheral blood polymorphonuclear leukocytes (PMNLs) were isolated from citrate-treated whole blood from healthy volunteers. Erythrocytes were removed via dextran sedimentation, and PMNLs were separated from peripheral blood mononuclear cells (PBMCs) by density gradient centrifugation utilizing PBMC spin medium (pluriSelect Life Science). Eosinophils were further separated from neutrophils by negative magnetic selection of the PMNL fraction using MACS cell separation system (Eosinophil Isolation Kit, Miltenyi Biotech), with a resulting purity of typically ≥98% [53 (link)].
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Publication 2023
Biological Assay BLOOD Blood Cells Cell Separation Centrifugation, Density Gradient Citrates Dextran EK 17 Eosinophil Eotaxin-1 Erythrocytes Ethics Committees, Research Glucose Granulocyte Healthy Volunteers HEPES Homo sapiens isolation Isoxazoles Leukocytes methyl acetate Neutrophil PBMC Peripheral Blood Mononuclear Cells Phosphates polycarbonate Saline Solution
α-Amino-3-hydroxyl-5-methyl-4-isoxazole-propionate (AMPA; Abcam) was infused through an Alzet osmotic minipump (Model 2004; capacity, ∼234 µl; flow rate, 0.23 μl/h) directly into the spinal cord tissue. Osmotic minipumps were filled with PBS (for control groups) or with 1.5 mM (low-dose) and 3.0 mM (high-dose) AMPA dissolved in filtered PBS, and were incubated in filtered isotonic saline solution at 37°C for 48 h before surgical implantation to achieve a constant flow rate. NaBut (Sigma-Aldrich) at a dose of 500 mg/kg (0.9 M), or PBS (as control), was administered intraperitoneally. Each batch of NaBut solution was freshly prepared in sterile filtered PBS. Intraperitoneal administration was performed daily after motor behavior assessment for 6 days or 9 days after minipump surgical implantation (see below). The combination of osmotic minipump infusion and i.p. administration yielded six groups: control (vehicle spinally infused and vehicle administered intraperitoneally), control+NaBut, AMPA low-dose or AMPA high-dose+vehicle, and AMPA low-dose or AMPA high-dose+NaBut. Every AMPA low-dose or high-dose group was surgically implanted and studied at the same time as the other groups.
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Publication 2023
alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid Hydroxyl Radical Injections, Intraperitoneal Isoxazoles Normal Saline Operative Surgical Procedures Osmosis Ovum Implantation Propionates Spinal Cord Sterility, Reproductive Tissues
α-Amino-3-hydroxyl-5-methyl-4-isoxazole-propionate (AMPA; Abcam) was infused through an Alzet osmotic minipump (Model 2004; capacity, ∼234 µl; flow rate, 0.23 μl/h) directly into the spinal cord tissue. Osmotic minipumps were filled with PBS (for control groups) or with 1.5 mM (low-dose) and 3.0 mM (high-dose) AMPA dissolved in filtered PBS, and were incubated in filtered isotonic saline solution at 37°C for 48 h before surgical implantation to achieve a constant flow rate. NaBut (Sigma-Aldrich) at a dose of 500 mg/kg (0.9 M), or PBS (as control), was administered intraperitoneally. Each batch of NaBut solution was freshly prepared in sterile filtered PBS. Intraperitoneal administration was performed daily after motor behavior assessment for 6 days or 9 days after minipump surgical implantation (see below). The combination of osmotic minipump infusion and i.p. administration yielded six groups: control (vehicle spinally infused and vehicle administered intraperitoneally), control+NaBut, AMPA low-dose or AMPA high-dose+vehicle, and AMPA low-dose or AMPA high-dose+NaBut. Every AMPA low-dose or high-dose group was surgically implanted and studied at the same time as the other groups.
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Publication 2023
alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid Hydroxyl Radical Injections, Intraperitoneal Isoxazoles Normal Saline Operative Surgical Procedures Osmosis Ovum Implantation Propionates Spinal Cord Sterility, Reproductive Tissues
The numerical data on 113 piperidine derivatives (pyridine-substituted piperidines, tertiary alcohol-bearing piperidines, spirocyclic piperidines, and isoxazole-containing piperidines) were taken from the literature [9 (link)]. The activity is expressed as −logIC50 or pIC50 [9 (link)]. The set of compounds is split into (i) active training (≈25%), (ii) passive training (≈25%), (iii) calibration (≈25%), and (iv) validation sets (≈25%). Each set has a defined task. The active training set is used to build the model; molecular features extracted from the simplified molecular-input line-entry system (SMILES—which represents the structure) [28 (link),29 (link),37 (link)], of the active training set are involved in the Monte Carlo optimization to provide correlation weights for the above features, which provide the largest target function value on the active training set. The passive training checks whether the model for the active training set is satisfactory for SMILES that were not involved in the active training set. The calibration set should detect when overtraining (overfitting) starts. The validation set provides the possibility to assess the predictive potential of a model since the data from the validation set is unknown while building up a model. Our experience with CORAL shows that equal distribution over the four sets mentioned is likely the most rational strategy.
At the beginning of the optimization, the correlation coefficients between the experimental values of the endpoint and the descriptor simultaneously increase for all sets, but the correlation coefficient for the calibration set reaches a maximum; this is the start of overtraining, and further optimization leads to a decrease of the correlation coefficient for the calibration set. Optimization should be stopped when overtraining starts. After stopping the Monte Carlo optimization procedure, the validation set is needed to assess the model’s predictive potential.
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Publication 2023
Coral derivatives Ethanol Isoxazoles piperidine Piperidines pyridine
Orange crystal, Yield, 75% mp: 155–157, FTIR nmax (KBr): 3058.80/cm (aromatic C-H), 2951.83/cm (CH3), 1659.38/cm (C=N of Schiff base), 1626.20/cm (C=N of Isoxazole ring), 1598.85/cm (aromatic C=C), 1483.09/cm (N=N), 1522 and 1344/cm (NO2); 1H NMR (500 MHz, DMSO, δ): 2.42 (3H, s, CH3), 7.14–7.85 (9H, m, Ar-H), 8.40 (1H, s, N=CH);13C NMR (DMSO-d6, ppm, 125 MHz): 10.38 (CH3), 115.35 (C=C of Isoxazole ring), 124.26–132.55 (9 CH of aromatic ring), 131.11–146.96 (3C of aromatic ring), 151.65 (C=N of Isoxazole ring), 155.53 (C=N of Schiff base), 159.26 (C-O of Isoxazole ring).
Publication 2023
1H NMR Carbon-13 Magnetic Resonance Spectroscopy Isoxazoles Schiff Bases Spectroscopy, Fourier Transform Infrared Sulfoxide, Dimethyl

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NaBut is a laboratory reagent used in various chemical and biological applications. It is a colorless, crystalline compound with the chemical formula CH3CH2COONa. NaBut functions as a buffer and is commonly used to maintain a specific pH range in experimental solutions.
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More about "Isoxazoles"

Isoxazoles are a versatile class of heterocyclic organic compounds containing a five-membered ring with one oxygen and one nitrogen atom.
These versatile chemicals have a wide range of applications in medicinal chemistry, agrochemicals, and materials science.
Explore reproducible protocols and identify the most effective methods for working with isoxazoles using the AI-driven platform PubCompare.ai.
Isoxazoles are closely related to other heterocyclic compounds like pyrazoles, oxazoles, and isothiazoles.
They can be synthesized through various methods, such as 1,3-dipolar cycloaddition reactions, ring expansion of cyclopropanes, and cyclization of γ-aminobutyric acid (GABA) derivatives.
Isoxazoles have been used as building blocks for the development of pharmaceuticals, including the anti-inflammatory drug B-isox and the neuroprotective agent ISO-1.
Optimizing research on isoxazoles can be streamlined with the help of PubCompare.ai, an innovative AI-driven platform.
This tool allows you to explore reproducible protocols from literature, preprints, and patents, and uses AI-driven comparisons to identify the most effective methods and products.
For example, you can compare the use of the NaBut solvent, the Alzet osmotic minipump, and the XBridge 150×25 5 μM column to determine the most suitable approach for your isoxazole-related experiments.
By leveraging the power of PubCompare.ai, you can achieve better results in your isoxazole research, whether you're working on new drug candidates, agrochemical formulations, or advanced materials.
Explore the diverse applications and synthetic strategies for this versatile class of compounds, and streamline your workflow with the help of this innovative AI-driven platform.