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KU 55933

KU 55933 is a potent and selective inhibitor of the phosphoinositide 3-kinase-related protein kinase (PIKK) family, including ataxia telangiectasia mutated (ATM) and DNA-dependent protein kinase (DNA-PK).
It has been widely used in the study of cellular responses to DNA damage and the regulation of cell cycle progression.
KU 55933 has been shown to sensitize cancer cells to ionizing radiation and certain chemotherapeutic agents, making it a valuable tool in the development of combination therapies.
Researchers can use PubCompare.ai to easily locate protocols involving KU 55933 from literature, pre-prints, and patents, and compare them using AI-driven analysis to identify the most effective approaches for their specific research needs, improving workflow and accuracy of results.

Most cited protocols related to «KU 55933»

U2OS-based lines were maintained under standard conditions. cDNA cloning was by standard procedures. siRNA transfections were with Lipofectamine RNAiMAX (Invitrogen). IR was administered with a Faxitron X-ray machine (Faxitron X-ray Corporation). ATM inhibition was by KU-55933 (KuDOS Pharmaceuticals). Laser micro-irradiation was with a FluoView 1000 confocal microscope (Olympus) with 37°C heating stage (Ibidi) and 405 nm diode (6 mW). FRAP was performed when laser-track accumulation of GFP-tagged protein reached maximal steady-state level. For immunofluorescence, cells were pre-extracted or not, fixed with 2% paraformaldehyde, permeabilized and stained. For whole cell extracts, cells were lysed on plates with 2% SDS, 50 mM Tris-HCl pH 7.5, 20 mM N-ethylmaleimide (Sigma-Aldrich) and protease inhibitor cocktail (Roche). To immunoprecipitate 53BP1, BRCA1 and sumoylated proteins, different lysis and binding buffers were used (Supplementary Information). HR and NHEJ assays were as previously described17 (link),28 (link). For IR survival, cells were transfected with siRNA and exposed to IR. After 10-14 days, colonies were stained with 0.5% crystal violet/20% ethanol, counted and normalized to plating efficiencies. For Florescence-Activated Cell Sorting (FACS) of propidium iodide-stained cells, data were analyzed by FlowJo software. All error-bars represent STDEV. Detailed descriptions of methods are provided in Supplementary Information.
Publication 2009
Biological Assay BRCA1 protein, human Buffers Cell Extracts Cells DNA, Complementary Ethanol Ethylmaleimide Immunofluorescence KU 55933 Lipofectamine Microscopy, Confocal Non-Homologous DNA End-Joining paraform Pharmaceutical Preparations Propidium Iodide Protease Inhibitors Proteins Psychological Inhibition Radiography Radiotherapy RNA, Small Interfering TP53BP1 protein, human Transfection Tromethamine Violet, Gentian
For PCC analysis, cells were treated with 50 ng/ml calyculin A (Calbiochem) for 30 min before harvesting. For SCE analysis, cells were grown for 48 h in BrdU before irradiation. Colcemid (together with 1 mM caffeine to overcome the G2/M arrest) was added at 8 h until 12 h post-irradiation to collect cells in mitosis. Chromatid breaks (for PCC analysis) or SCEs were scored in at least 100 chromosome spreads from at least three independent experiments per data point. Staining was according to standard protocols. Aphidicolin (Sigma) was added at 1 μg/ml immediately before IR. ATM inhibitor (KU55933) and DNA-PK inhibitor (NU7026), a kind gift from Kudos Pharmaceuticals (Cambridge, UK), were added at 20 μM 60 min prior to IR. X-ray irradiation was performed at 90- or 120-kV γ-irradiation using a 137Cs source. Dosimetry was performed with ion chambers and considered the increase in dose for cells grown on glass coverslips relative to plastic surfaces (Kegel et al, 2007 (link)).
Publication 2009
Aphidicolin Bromodeoxyuridine Caffeine calyculin A Cells Chromatids Chromosomes Colcemide KU 55933 Mitosis NU 7026 Pharmaceutical Preparations Protein Kinase, DNA-Dependent Radiometry Radiotherapy X-Rays, Diagnostic

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Publication 2013
B-Lymphocytes Cloning Vectors Exons inhibitors Internal Ribosome Entry Sites KU 55933 Microspheres Mus NU 7026 Protein Kinase, DNA-Dependent Retroviridae Simian virus 40 Spleen SPN protein, human TP53BP1 protein, human Virus
Anti-p(S15)-p53, -p(T68)-Chk2, -p(S473)-AKT, -AKT, -p(S136)-BAD, -BAD, -p(S9)GSK3β, and -p(S1981)-ATM antibodies and GST-GSK3β substrate were purchased from Cell Signaling Technology, Inc., Danvers, MA. Anti-γ-H2AX (S139) antibody was from Millipore, Billerica, MA. Anti-β-actin, -p(T202/Y204)-ERK1/2 and -ERK2 antibodies were from Santa Cruz Biotechnology, Santa Cruz, CA. Anti-GSK3β, insulin and okadaic acid were purchased from Sigma Aldrich, St Louis, MO. Matrigel was purchased from BD Biosciences, San Jose, CA. SH-5 was purchased from EMD Biosciences (Gibbstown, NJ), and PD184352 has been described (21 (link)). KU-60019, KU-55933, and KU-57788 were all from KuDOS Pharmaceuticals Ltd, Cambridge, UK.
Publication 2009
Actins Antibodies GSK3B protein, human Immunoglobulins Insulin KU 55933 KU 60019 matrigel Mitogen-Activated Protein Kinase 3 Mitogen Activated Protein Kinase 1 Okadaic Acid PD 184352 Pharmaceutical Preparations

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Publication 2013
6-(4-hydroxyphenyl)-2-thioxo-2,3-dihydro-4(1H)-pyrimidinone A549 Cells Cells Eagle Fetal Bovine Serum Fibroblasts Gene, BRCA2 Homo sapiens KU 55933 NU 7441 PRKDC protein, human Radiotherapy

Most recents protocols related to «KU 55933»

All animal experiments were performed with the approval of Animal Care and Use Ethics Committee of Army Medical Center of PLA. (i) HeLa NC and HeLa shAPE1 cells (ii) HeLa WT cells (5 × 106 in 100 ul medium with Matrigel) were injected subcutaneously in flank of 8 week-old male nude mice. Subcutaneous tumors were allowed to grow for 2 weeks before treatments. When palpable tumors were visible, mice of (i) were divided into four and (ii) were divided into seven groups (n = 7 in each group). Mice were received treatments for 9 days (Ku55933, 10 mg/kg, intraperitonially, daily; E3330, 40 mg/kg intraperitonially, daily; Inhibitor III, 20 mg/kg, intraperitonially, daily; IR, 5 Gy, every 2 days). Specifically, Mice were treated with (i) vehicle, Ku55933, IR, Ku55933 + IR (ii) vehicle, IR, E3330 + IR, Inhibitor III + IR, Ku55933 + IR, E3330 + Ku55933 + IR, and Inhibitor III + Ku55933 + IR. Unblinded tumor measurements were recorded once every 2 days and the volume as calculated by the formula: (width) 2 × length/3. The mice were euthanized in a gas canister with gradual fill carbon dioxide at the end of the treatment cycles and sacrificed. Weighed the tumor with electronic scale.
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Publication 2023
Animals Carbon Cycle E 3330 Ethics Committees HeLa Cells KU 55933 Males matrigel Mice, Nude Mus Neoplasms
HeLa, SiHa WT cell lines were purchased form National Collection of Authentical Cell Cultures of China. HeLa C65S-APE1 and HeLa WT-APE1 (provided by Gianluca Tell Lab, Department of Medical and Biological Sciences, University of Udine, Udine, Italy). Cells were cultured in DMEM medium (Gibco, China), supplemented with 1% Penicillin/Streptomycin (Hyclone, US) and 10% fetal bovine serum (Gibco, US) and were monitored for mycoplasma contamination using the Mycoplasma PCR Detection Kit (Beyotime, catalog No.C0301S, Shanghai, China). All chemical reagents were supplied by Selleck (Shanghai, China) unless otherwise specified mentioned. E3330 (catalog No. S7445), Ku55933 (catalog No. S1092), MMS (catalog No. E0609), MG132 (catalog No. S2619), Doxycycline (catalog No. S5159). Cycloheximide (catalog No.C4859, Sigma, USA), Inhibitor III (Sigma, catalog No.262017, USA), TBHP (Sigma, catalog No.416665, USA). The 8MV X-rays at indicated doses were generated by (Elekta, synergy 2178).
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Publication 2023
APEX1 protein, human Cell Culture Techniques Cell Lines Cells Culture Media Cycloheximide Doxycycline E 3330 Fetal Bovine Serum HeLa Cells KU 55933 MG 132 Mycoplasma Penicillins Streptomycin X-Rays, Diagnostic
All cell lines used in this paper were correctly authenticated. SCC011 cell line (RRID:CVCL_5986), previously described64 (link), has been reported having a “damaging” annotation which may lead to either loss-of-function or gain-of-function activities, in our experiments these cells behave as cells with a functional p53, at least for the D2 and p21 regulation, and are then used as a model of cells with a functional p53 protein. SCC011were cultured in RPMI 1640 Medium (HiMedia Leading BioSciences Company, Mumbai, Maharashtra, India, cod. AL028) supplemented with 10% Fetal Bovine Serum (HiMedia Leading BioSciences Company, Mumbai, Maharashtra, India, cod. RM10432), 1% L-Glutamine (Gibco, Thermo Fisher Scientific, Waltham, MA, USA, cod. 25030024) and 1% Penicillin/Streptomycin (Gibco, Thermo Fisher Scientific, Waltham, MA, USA, cod. 15070063). p53 mutant SCC cell line (SCC13, RRID:CVCL_4029) and p53 mutant D2 TET-ON SCC cell line12 (link), derived from a skin SCC65 (link), were cultured in Keratinocyte-SFM (KSFM 1X, Gibco, Thermo Fisher Scientific, Waltham, MA, USA, cod. 17005059) medium [+] L-Glu (Gibco, Thermo Fisher Scientific, Waltham, MA, USA) with Bovine Pituitary Extract (BPE, 30.0 μg/mL, Gibco, Thermo Fisher Scientific, Waltham, MA, USA, cod. 11543530) and human recombinant Epidermal Growth Factor (EGF, 0.24 ng/mL, Gibco, Thermo Fisher Scientific, Waltham, MA, USA, cod. 11543530). HaCaT cells (RRID:CVCL_0038) were cultured in Dulbecco’s modified Eagle medium (DMEM, HiMedia Leading Bio Sciences Company, Mubai, India, cod. AL007) supplemented with 10% Fetal Bovine Serum, 1% L-Glutamine (Gibco, Thermo Fisher Scientific, Waltham, MA, USA, cod. 25030024) and 1% Penicillin/Streptomycin. All cell lines were mycoplasma free and were cultured at 37 °C in a humidified atmosphere with 5% CO2. In all the experiments in which THs was applied to cells, we used a combination of T3 (30.0 nM/24 h, Sigma-Aldrich, St. Louis, Missouri, USA, cod. T6397) and T4 (30.0 nM/24 h, Sigma-Aldrich St. Louis, Missouri, USA, cod. T2501), indicated throughout the text as THs, thus resembling physiological exposure of cells to both the active hormone (T3) and its pro-hormone (T4). In experiments in which THs were removed from the serum, THs-deprivation was achieved by FBS Charcoal absorption. For the studies of DNA damage mechanisms, we used etoposide (50.0 µM/30 min, Sigma-Aldrich, St. Louis, MO, USA, cod. E1383) and KuDOS (KU-55933, 100.0 µM/1 h, Sigma-Aldrich, St. Louis, MO, USA, cod. SML1109). UV-A/UV-B radiation was performed by exposing cells to 60 mJ/cm2 UV-A/UV-B light, using six Philips TL12/60W fluorescent lamps (Philips, Eindhoven, The Netherlands). UV-C radiation was performed by exposing cells to 100 µJ/cm2 UV-C light, using UV Stratalinker 2400 (Agilent Genomics/Stratagene Stratalinker 1800 UV Crosslinker, Stock #53267-1).
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Publication 2023
Atmosphere Bos taurus Cell Lines Cells Charcoal Culture Media DNA Damage Eagle Epidermal growth factor Etoposide Glutamine HaCaT Cells Homo sapiens Hormones Keratinocyte KU 55933 Mycoplasma Oncoprotein p53 Penicillins Physiology, Cell Serum Skin Streptomycin
Mouse antibody to MASTL (clone 4F9, Millipore MABT372) was described previously (Wang et al., 2011 (link)). Phospho-specific E6AP Ser-218 antibody was generated using a synthesize peptide (SSRIGDS phospho-S QGDNNLQ). Other antibodies include α-tubulin (Santa Cruz Biotechnology, #sc-5286), E6AP (Bethyl Laboratories, A300-351), HA (Cell signaling technology #3724), γ-H2AX Ser-139 (Cell signaling technology #9718S), phospho-ATM/ATR substrate motif (Cell signaling technology, #6966S), phospho-SMC1 Ser-957 (Cell signaling technology, #58052), phospho-CHK1 Ser-345 (Cell signaling technology, #2348), phospho-CHK2 Thr-68 (Cell signaling technology, #2197), Phospho-Aurora A (Thr288)/Aurora B (Thr232)/Aurora C (Thr198) (Cell signaling technology, #2914), Aurora A (Cell signaling technology, #14475), Aurora B (Cell Signaling technology, #3094), CDK1 (Cell signaling technology, #9112), Cyclin B (Cell signaling technology, #4138), phosphor-CDK substrates (Cell signaling technology, #2325), RPA32 (Thermo Fisher Scientific, # PA5-22256), S5a (Boston Biochem, #SP-400), ubiquitin (Cell Signaling Technology, #3936), and GFP (Cell Signaling Technology, #2555).
The following chemicals were used: Hydroxyurea (HU, MP Biomedicals, #102023), doxorubicin (DOX, MilliporeSigma, #25316-40-9), caffeine (Sigma-Aldrich, #C0750), ATM inhibitor (KU55933, Selleckchem, #S1092), ATR inhibitor (VE-821, Selleckchem, #S8007), cycloheximide (CHX, Fluka analytical, #01810), etoposide (Sigma-Aldrich, #E1383), camptothecin (Sigma-Aldrich, #C9911), G418 sulfate (Thermo Fisher Scientific, #10131035), MG132 (Calbiochem, #133407-82-6), cisplatin (R&D systems, #15663-27-1), propidium iodide (PI, Thermo Fisher Scientific, #P1304MP), and isopropyl-beta-D-thiogalactopyranoside (IPTG, RPI research products international, # 367-93-1).
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Publication Preprint 2023
alpha-Tubulin antibiotic G 418 Antibodies AURKA protein, human AURKB protein, human Caffeine Camptothecin CDK1 protein, human Cisplatin Clone Cells Cyclin B Cycloheximide Etoposide Hydroxyurea Immunoglobulins Isopropyl Thiogalactoside KU 55933 MG 132 Mus Peptides Phosphorus Propidium Iodide Sulfates, Inorganic Ubiquitin VE 821
Cells were grown on Nunc Lab-Tek II chambered cover glass for imaging experiment.
To express ATM-SPARK, HEK293 cells were transiently transfected using calcium phosphate transfection reagent (15 (link)) with 300 ng of ATM-SPARK plasmid plus 50 ng of H2B-mIFP-T2A-mCherry plasmid, 100 ng of mCherry-POLQ plasmid, or 300 ng of dnATM (ATM kinase dead) or dnATR (ATR kinase dead). Hela cells were transiently transfected using Lipofectamine 3000 transfection reagent with 300 ng of ATM-SPARK and 100 ng of mApple-53BP1 or BRCA1-mCherry plasmids. HEK293 and Hela cell were imaged 1 day after transfection. U2OS, T98G, CHLA, and U87 cells were infected with medium containing ATM-SPARK lentivirus and imaged 3 days after infection.
All imaging was carried out on Nikon Eclipse Ti inverted microscope equipped with Yokogawa CSU-W1 confocal scanner unit (Andor), digital complementary metal-oxide semiconductor camera ORCA-Flash4.0 (Hamamatsu), and ASI MS-2000 XYZ automated stage (Applied Scientific Instrumentation). Imaging was performed in environmental control unit incubation chamber (In Vivo Scientific) maintained at 37°C and with 5% CO2. Fluorescence images were acquired using Nikon CFI Plan Apochromatic 20× dry [numerical aperture (NA), 0.75] objective or CFI apochromatic TIRF 60× oil objective (NA, 1.49) against GFP, mCherry, or mIFP per experiment settings. Imaging started before adding NCS (500 ng/ml) or etoposide (3 μM) and continued for around 1.3 hours. For experiments with inhibitors (KU-55933, AZD6738, and NU7026), cells were pretreated with inhibitors (20 μM) or DMSO before NCS treatment. To demonstrate sensor reversibility, cells were preincubated with NCS and then treated with KU-55933 or DMSO, and imaging started for several frames before adding KU-55933 or DMSO and continued for around 1 hour.
Publication 2023
AZD6738 BRCA1 protein, human Calcium Phosphates Cells Etoposide Fingers Fluorescence HEK293 Cells HeLa Cells Infection inhibitors KU 55933 Lentivirus Lipofectamine Metals Microscopy NU 7026 Orcinus orca Oxides Phosphotransferases Plasmids POLQ protein, human Reading Frames Sulfoxide, Dimethyl TP53BP1 protein, human Transfection

Top products related to «KU 55933»

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KU55933 is a chemical compound used in laboratory research. It functions as a selective inhibitor of the ataxia telangiectasia mutated (ATM) protein kinase. ATM kinase plays a critical role in the DNA damage response pathway. KU55933 can be utilized by researchers to study the biological functions of ATM kinase in various experimental models.
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KU55933 is a laboratory equipment product manufactured by Merck Group. It is a small molecule compound that functions as a specific and potent inhibitor of the serine/threonine protein kinase ATM (Ataxia Telangiectasia Mutated). The core function of KU55933 is to serve as a research tool for studying the role of ATM in various cellular processes.
Sourced in United States, United Kingdom
KU55933 is a small molecule inhibitor that selectively and potently inhibits the serine/threonine protein kinase ATM (ataxia telangiectasia mutated). It is used in research and laboratory settings.
Sourced in United States, United Kingdom
VE-821 is a laboratory equipment product designed for scientific research purposes. It is a chemical compound used in various experimental applications. The core function of VE-821 is to serve as a research tool for scientific investigations, though its specific intended use is not provided in this description.
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Etoposide is a chemotherapeutic agent used in the treatment of various types of cancer. It is a topoisomerase inhibitor that disrupts the process of DNA replication, leading to cell death. Etoposide is available as a solution for intravenous administration.
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Fetal Bovine Serum (FBS) is a cell culture supplement derived from the blood of bovine fetuses. FBS provides a source of proteins, growth factors, and other components that support the growth and maintenance of various cell types in in vitro cell culture applications.
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Olaparib is a laboratory chemical product. It is a poly(ADP-ribose) polymerase (PARP) inhibitor. Olaparib functions by inhibiting the activity of PARP enzymes, which are involved in DNA repair processes.
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DMEM (Dulbecco's Modified Eagle's Medium) is a cell culture medium formulated to support the growth and maintenance of a variety of cell types, including mammalian cells. It provides essential nutrients, amino acids, vitamins, and other components necessary for cell proliferation and survival in an in vitro environment.
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DMSO is a versatile organic solvent commonly used in laboratory settings. It has a high boiling point, low viscosity, and the ability to dissolve a wide range of polar and non-polar compounds. DMSO's core function is as a solvent, allowing for the effective dissolution and handling of various chemical substances during research and experimentation.
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NU7441 is a potent and selective inhibitor of DNA-dependent protein kinase (DNA-PK). It functions by blocking the catalytic activity of DNA-PK, which plays a crucial role in the non-homologous end joining (NHEJ) pathway of DNA double-strand break repair.

More about "KU 55933"

KU 55933 is a highly potent and selective inhibitor of the phosphoinositide 3-kinase-related protein kinase (PIKK) family, which includes the key players ataxia telangiectasia mutated (ATM) and DNA-dependent protein kinase (DNA-PK).
This small-molecule compound has become a invaluable tool for researchers studying cellular responses to DNA damage and the regulation of cell cycle progression.
KU 55933 has demonstrated the ability to sensitize cancer cells to ionizing radiation and certain chemotherapeutic agents, such as the topoisomerase II inhibitor etoposide.
This makes it a valuable asset in the development of combinaion therapies, where it can potentially enhance the efficacy of standard cancer treatments.
Researchers can leverge the power of PubCompare.ai to easily locate protocols involving KU 55933 from the scientific literature, pre-prints, and patents.
The AI-driven analysis capabilities of this platform allow researchers to compare these protocols side-by-side, identifying the most effective approaches for their specific research needs.
This optimization of workflows and methdologies can lead to more accurate and reproducible results.
In addition to KU 55933, other compounds like VE-821, NU7441, and the PARP inhibitor olaparib may also be of interest for researchers studying DNA damage response pathways and cell cycle regulation.
When conducting experiments, it's important to carefully consider factors like cell culture media (DMEM), serum (FBS), and solvents (DMSO) to ensure the integrity and consistency of your data.