All lipids were obtained from Avanti Polar Lipids, Inc. For t-SNARE reconstitution, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine (POPE), 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoserine (POPS), and cholesterol were mixed in a molar ratio of 60:20:10:10. For v-SNARE reconstitution, POPC, POPE, POPS, cholesterol, N-(7-nitro-2,1,3-benzoxadiazole-4-yl)-1,2-dipalmitoyl phosphatidylethanolamine (NBD-DPPE), and N-(Lissamine rhodamine B sulfonyl)-DPPE (rhodamine-DPPE) were mixed at a molar ratio of 60:17:10:10:1.5:1.5. SNARE proteoliposomes were prepared by detergent dilution and isolated on an Accudenz density gradient flotation (Weber et al., 1998 (link)). SNARE proteins were kept at physiologically relevant densities, with protein/lipid ratios at 1:200 for v-SNAREs (similar to VAMP2 densities reported for native synaptic vesicles; Jahn and Südhof, 1994 (link); Walch-Solimena et al., 1995 (link)) and at 1:500 for t-SNARE liposomes. Reconstituted liposomes were routinely monitored by dynamic light scattering and electron microscopy with negative staining.
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Lissamine rhodamine B
Lissamine rhodamine B
Lissamine rhodamine B is a fluorescent dye used as a tracer and stain in various biological and analytical applications.
It is a red-fluorescent dye that binds to proteins and lipids, making it useful for visualizing cellular structures and tracking fluid movement.
Researchers can use PubCompare.ai's AI-driven comparison and optimizaiton tools to quickly locate relevant information on Lissamine rhodamine B across scientific literature, pre-prints, and patents, and identify the best products and methods for their research needs.
This data-driven approach helps ensure accurate and reproducible results in studies utilizing this versatile fluorescent probe.
It is a red-fluorescent dye that binds to proteins and lipids, making it useful for visualizing cellular structures and tracking fluid movement.
Researchers can use PubCompare.ai's AI-driven comparison and optimizaiton tools to quickly locate relevant information on Lissamine rhodamine B across scientific literature, pre-prints, and patents, and identify the best products and methods for their research needs.
This data-driven approach helps ensure accurate and reproducible results in studies utilizing this versatile fluorescent probe.
Most cited protocols related to «Lissamine rhodamine B»
1,2-dipalmitoyl-3-phosphatidylethanolamine
1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(7-nitro-2-1,3-benzoxadiazol-4-yl)
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoserine
1-palmitoyl-2-oleoylphosphatidylcholine
bis(diphenylphosphine)ethane
Cholesterol
Detergents
Electron Microscopy
Lipids
Liposomes
lissamine rhodamine B
Molar
Phosphatidylethanolamines
Phosphorylcholine
Phosphoserine
Proteins
proteoliposomes
Rhodamine
SNAP Receptor
Synaptic Vesicles
Target Membrane SNARE Proteins
Technique, Dilution
Vesicle-Associated Membrane Protein 2
Vesicle SNARE Proteins
Protocol full text hidden due to copyright restrictions
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1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl)
1,2-oleoylphosphatidylcholine
Alabaster
Buffers
dioleoyl cephalin
Droxidopa
Freezing
Lipid A
Lipids
lissamine rhodamine B
Magnesium Chloride
Sodium Chloride
Tromethamine
1,2-distearoylphosphatidylethanolamine
Annexin A5
Apoptosis
Brain
Bromides
Carbodiimides
Cell Culture Techniques
Chitosan
Chlorides
cholesteryl succinate
coumarin 6
Decompression Sickness
dilactide
dioleoyl cephalin
Eagle
Endothelial Cells
Fetal Bovine Serum
Fluorescein-5-isothiocyanate
lissamine rhodamine B
N-hydroxysuccinimide
penetratin
Phosphates
phosphoethanolamine
Poly A
polyethylene glycol 2000
Polyethylene Terephthalates
Propane
Rhodamine
Saline Solution
Tissues
Transferrin
1,2-oleoylphosphatidylcholine
Brain
Buffers
dioleoyl cephalin
Droxidopa
Freezing
Glycerylphosphorylcholine
HEPES
Lipid A
Lipids
lissamine rhodamine B
Nitrogen
Phosphatidylinositols
Phospholipids
Pigs
polycarbonate
Polypropylenes
Pulse Rate
Serine
Silicon Dioxide
Sodium Chloride
Solvents
Unilamellar Vesicles
Vacuum
Most recents protocols related to «Lissamine rhodamine B»
Rhodamine labeling of ZF5.3 (synthesized on Rink Amide resin (100–200 mesh) Novabiochem®) was achieved by the incorporation of (S)-2-(Fmoc-amino)-6-azidohexanoic acid at the peptide N-terminus followed by acetylation to generate Ac-Lys(N3)-ZF5.3. The peptide was cleaved from the resin with 82.7% TFA, 5.1% phenol, 5.1% H2O, 5.1% thioanisole, 1% DTT (w/v), and 1% TIPS13 (link). Following cleavage and purification by RP-HPLC, Ac-Lys(N3)-ZF5.3 was reacted with Lissamine Rhodamine B ethylenediamine functionalized with a DBCO (Rho-DBCO). Rho-DBCO was generated by reacting Lissamine Rhodamine B ethylenediamine (#L2424) with 10 molar equivalents of DBCO-NHS ester (#CCT-1491) in DMSO at RT for 1 h. HPLC-purified Rho-DBCO was reacted with Ac-Lys(N3)-ZF5.3 under the same conditions stated above. Final Rho-ZF5.3 was obtained following RP-HPLC and lyophilized and reconstituted as previously described13 (link).
Soybean polar lipid extract (SPE, Avanti Polar Lipids), E.coli polar lipid extract (Avanti Polar Lipids), 1,2dipalmitoyl-sn-glycero-3-phosphoethanolamine-N (16:0 sulfonyl lissamine rhodamine B)-(ammonium salt) (16:0 Liss Rhod PE, Avanti Polar Lipids), Glycerol (Sigma-Aldrich), Chloroform (Sigma-Aldrich).
1-Palmitoyl-2-oleoyl-sn-glycerol-3-phosphocholine (POPC) was purchased from Sapphire Bioscience (NSW, Australia), fluorophore lipids: Rh-PE 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) (ammonium salt), and NBD-PE (1-oleoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine-N-[tetra-(ethylene glycol)]-N′-(7-nitro-2-1,3benzoxadiazol-4-yl)) (ammonium salt) were obtained from Avanti Polar Lipids. Milli-Q water was utilised for all the experiments.
16:0–18:1 1-palmitoyl-2-oleoyl-glycero-3-phosphocholine
(POPC), 16:0–18:1 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-[1′-rac-glycerol]
(POPG), 18:1 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-[lissamine rhodamine B sulfonyl] (Rh-PE), and 18:1 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-[7-nitro-2–1,3-benzoxadiazol-4-yl]
(NBD-PE) were all purchased from Avanti Polar Lipids (Alabaster, AL,
USA).
(POPC), 16:0–18:1 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-[1′-rac-glycerol]
(POPG), 18:1 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-[lissamine rhodamine B sulfonyl] (Rh-PE), and 18:1 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-[7-nitro-2–1,3-benzoxadiazol-4-yl]
(NBD-PE) were all purchased from Avanti Polar Lipids (Alabaster, AL,
USA).
Top products related to «Lissamine rhodamine B»
Sourced in United States
1,2-dioleoyl-sn-glycero-3-phosphocholine is a synthetic lipid compound. It is a phospholipid that consists of two oleic acid chains attached to a glycerol backbone, with a phosphocholine headgroup.
Sourced in United States
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine is a phospholipid consisting of a glycerol backbone with a palmitic acid and an oleic acid esterified to the first and second carbons, respectively, and a phosphocholine group attached to the third carbon. This compound is a commonly used lipid in various biochemical and biophysical applications.
Sourced in United States, Canada
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine is a synthetic phospholipid product offered by Avanti Polar Lipids. It is a phosphatidylethanolamine lipid with two oleic acid chains attached to a glycerol backbone and a phosphoethanolamine head group.
Sourced in United States, Germany, United Kingdom, India, Italy, Spain, France, Canada, Switzerland, China, Australia, Brazil, Poland, Ireland, Sao Tome and Principe, Chile, Japan, Belgium, Portugal, Netherlands, Macao, Singapore, Sweden, Czechia, Cameroon, Austria, Pakistan, Indonesia, Israel, Malaysia, Norway, Mexico, Hungary, New Zealand, Argentina
Chloroform is a colorless, volatile liquid with a characteristic sweet odor. It is a commonly used solvent in a variety of laboratory applications, including extraction, purification, and sample preparation processes. Chloroform has a high density and is immiscible with water, making it a useful solvent for a range of organic compounds.
Sourced in United States
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) is a phospholipid compound used in laboratory research. It serves as a fluorescent label for the study of lipid dynamics and membrane properties. The compound contains a phosphoethanolamine headgroup, two oleic acid fatty acid chains, and a lissamine rhodamine B fluorophore.
Sourced in United States, Germany, United Kingdom, India, Japan, Sao Tome and Principe, China, France, Spain, Canada, Switzerland, Italy, Australia, Israel, Brazil, Belgium, Poland, Hungary, Macao
Cholesterol is a lab equipment product that measures the concentration of cholesterol in a given sample. It provides quantitative analysis of total cholesterol, HDL cholesterol, and LDL cholesterol levels.
Sourced in United States
NBD-PE is a fluorescent lipid analog that can be used as a probe in liposome and membrane-based studies. It consists of a phosphatidylethanolamine (PE) headgroup attached to a nitrobenzoxadiazole (NBD) fluorescent moiety. NBD-PE can be incorporated into lipid membranes and its fluorescence properties can be used to study membrane dynamics and interactions.
Sourced in United States, Germany, United Kingdom, Italy, China, Japan, France, Canada, Sao Tome and Principe, Switzerland, Macao, Poland, Spain, Australia, India, Belgium, Israel, Sweden, Ireland, Denmark, Brazil, Portugal, Panama, Netherlands, Hungary, Czechia, Austria, Norway, Slovakia, Singapore, Argentina, Mexico, Senegal
Triton X-100 is a non-ionic surfactant commonly used in various laboratory applications. It functions as a detergent and solubilizing agent, facilitating the solubilization and extraction of proteins and other biomolecules from biological samples.
Sourced in United States
1,2-dioleoyl-sn-glycero-3-phospho-L-serine is a phospholipid compound used in research applications. It is a synthetic version of the naturally occurring phospholipid phosphatidylserine. The compound consists of a glycerol backbone with two oleic acid chains and a serine head group.
Sourced in United States, Germany, United Kingdom, Sao Tome and Principe, France, Australia, Italy, Japan, Denmark, China, Switzerland, Macao
Calcein is a fluorescent dye used in various laboratory applications. It functions as a calcium indicator, allowing for the detection and measurement of calcium levels in biological samples.
More about "Lissamine rhodamine B"
Lissamine rhodamine B is a versatile fluorescent dye with a wide range of applications in biological and analytical research.
Also known as rhodamine B, this red-fluorescent dye is commonly used as a tracer and stain to visualize cellular structures and track fluid movement.
The dye's ability to bind to proteins and lipids makes it a valuable tool for researchers studying cellular processes and membrane dynamics.
For example, Lissamine rhodamine B can be used to label phospholipids like 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), and 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), as well as cholesterol and other lipid-based molecules.
In addition to its use as a fluorescent probe, Lissamine rhodamine B has also been employed in studies involving chloroform, a common solvent, and detergents like Triton X-100.
Researchers can leverage PubCompare.ai's AI-driven comparison and optimization tools to quickly locate relevant information on the use of Lissamine rhodamine B across scientific literature, preprints, and patents, helping to identify the best products and methods for their specific research needs.
This data-driven approach ensures accurate and reproducible results in studies utilizing this versatile fluorescent dye, whether it's being used to track the movement of calcein, label phospholipids like 1,2-dioleoyl-sn-glycero-3-phospho-L-serine (DOPS), or visualize cellular structures marked with NBD-PE (1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl)).
By empowering researchers with comprehensive, curated information, PubCompare.ai helps streamline the research process and drive scientific discovery.
Also known as rhodamine B, this red-fluorescent dye is commonly used as a tracer and stain to visualize cellular structures and track fluid movement.
The dye's ability to bind to proteins and lipids makes it a valuable tool for researchers studying cellular processes and membrane dynamics.
For example, Lissamine rhodamine B can be used to label phospholipids like 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), and 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), as well as cholesterol and other lipid-based molecules.
In addition to its use as a fluorescent probe, Lissamine rhodamine B has also been employed in studies involving chloroform, a common solvent, and detergents like Triton X-100.
Researchers can leverage PubCompare.ai's AI-driven comparison and optimization tools to quickly locate relevant information on the use of Lissamine rhodamine B across scientific literature, preprints, and patents, helping to identify the best products and methods for their specific research needs.
This data-driven approach ensures accurate and reproducible results in studies utilizing this versatile fluorescent dye, whether it's being used to track the movement of calcein, label phospholipids like 1,2-dioleoyl-sn-glycero-3-phospho-L-serine (DOPS), or visualize cellular structures marked with NBD-PE (1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl)).
By empowering researchers with comprehensive, curated information, PubCompare.ai helps streamline the research process and drive scientific discovery.