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Lissamine rhodamine B

Lissamine rhodamine B is a fluorescent dye used as a tracer and stain in various biological and analytical applications.
It is a red-fluorescent dye that binds to proteins and lipids, making it useful for visualizing cellular structures and tracking fluid movement.
Researchers can use PubCompare.ai's AI-driven comparison and optimizaiton tools to quickly locate relevant information on Lissamine rhodamine B across scientific literature, pre-prints, and patents, and identify the best products and methods for their research needs.
This data-driven approach helps ensure accurate and reproducible results in studies utilizing this versatile fluorescent probe.

Most cited protocols related to «Lissamine rhodamine B»

All lipids were obtained from Avanti Polar Lipids, Inc. For t-SNARE reconstitution, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine (POPE), 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoserine (POPS), and cholesterol were mixed in a molar ratio of 60:20:10:10. For v-SNARE reconstitution, POPC, POPE, POPS, cholesterol, N-(7-nitro-2,1,3-benzoxadiazole-4-yl)-1,2-dipalmitoyl phosphatidylethanolamine (NBD-DPPE), and N-(Lissamine rhodamine B sulfonyl)-DPPE (rhodamine-DPPE) were mixed at a molar ratio of 60:17:10:10:1.5:1.5. SNARE proteoliposomes were prepared by detergent dilution and isolated on an Accudenz density gradient flotation (Weber et al., 1998 (link)). SNARE proteins were kept at physiologically relevant densities, with protein/lipid ratios at 1:200 for v-SNAREs (similar to VAMP2 densities reported for native synaptic vesicles; Jahn and Südhof, 1994 (link); Walch-Solimena et al., 1995 (link)) and at 1:500 for t-SNARE liposomes. Reconstituted liposomes were routinely monitored by dynamic light scattering and electron microscopy with negative staining.
Publication 2010
1,2-dipalmitoyl-3-phosphatidylethanolamine 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(7-nitro-2-1,3-benzoxadiazol-4-yl) 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoserine 1-palmitoyl-2-oleoylphosphatidylcholine bis(diphenylphosphine)ethane Cholesterol Detergents Electron Microscopy Lipids Liposomes lissamine rhodamine B Molar Phosphatidylethanolamines Phosphorylcholine Phosphoserine Proteins proteoliposomes Rhodamine SNAP Receptor Synaptic Vesicles Target Membrane SNARE Proteins Technique, Dilution Vesicle-Associated Membrane Protein 2 Vesicle SNARE Proteins
NanoART of IDV, RTV and EFV were prepared by high-pressure homogenization using an Avestin C-5 homogenizer (Avestin, Inc., Ottawa, ON, Canada). A range of surfactants were used to coat the drug crystals including Lipoid E80® (an egg phosphatide mixture of phosphatidylcholine, phosphatidylethanoloamine and the hydrolyzed lyso [single aliphatic chain]; Lipoid GmbH, Ludwigshafen, Germany), a block copolymer of ethylene oxide and propylene oxide (poloxamer 188 [P-188]; Spectrum Chemicals, Gardena, CA, USA), 1,2-distearoyl-phosphatidyl-ethanolamine-methyl-poly(ethylene-glycol) (DSPE-mPEG2000; Genzyme, Cambridge, MA, USA), poly(lactic-co-glycolic acid) (PLGA; ratio 50:50 of lactide to glycolide; Sigma-Aldrich, St Louis, MO, USA), (1-oleoyl-2-[6-[(7-nitro-2–1,3-benzoxadiazol-4-yl)amino]hexanoyl]-3-trimethylammonium propane) (DOTAP; Genzyme) and cetyltrimethyl ammonium bromide (CTAB; Sigma-Aldrich). To coat the nanosized drug crystals, either alone or in combination, each surfactant (or copolymer) (weight/weight percent) was made up of Lipoid E80 (1.4%), P-188 (0.5%), DSPE -mPEG2000 (0.2%), PLGA (12%), DOTAP (0.1%) and CTAB (0.5%). The nanosuspensions were formulated at a slightly alkaline pH of 7.8 using either 10 mM sodium phosphate or 10 mM HEPES as a buffer. Tonicity was adjusted with glycerin (2.25%) or sucrose (9.25%). Drug was added to the surfactant solution to make a concentration of approximately 2% (weight-to-volume ratio [%]). Lissamine rhodamine B 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine, triethylammonium salt (rDHPE; Invitrogen, Carlsbad, CA, USA) was used to label nanoART, which appeared as red fluorescence. In order to synthesize nanoART, a suspension was prepared by adding crystalline drug to a surfactant solution and mixing for 4–7 min using an Ultra-Turrax T-18 (IKA® Works Inc., Wilmington, NC, USA) rotor-stator mixer to reduce initial particle size. The suspension was homogenized at 20,000 pounds per square inch for approximately 30 passes or until desired particle size was reached. For DOTAP-containing suspensions, the homogenized suspension was centrifuged (12,100 × g for 30 min at 5°C) to pellet the drug particles. The supernatant was decanted and surfactant-containing DOTAP was added to the drug pellet. The drug was resuspended by mixing with an Ultra-Turrax T-18.
In the case of EFV–PLGA NPs, EFV (1.25 g) and PLGA (6 g) were dissolved in dichloromethane (50 ml) and added to a 1% poly(vinyl) alcohol solution (500 ml). Particle size was achieved by sonicating at 50% amplitude for 10 min using a 400/600 W sonicator with a ¾ inch high gain probe. The solution was stirred overnight to evaporate the dichloromethane-hardened particles. The suspension was then centrifuged, washed with 18-Ω water and decanted twice. The particles were suspended in 10% mannitol before being frozen or lyophilized for storage. For all nanosuspensions, particle size was measured using a HORIBA LA 920 light scattering instrument (HORIBA Instruments Inc., Irvine, CA, USA; RRI = 1.08 for IDV and 1.20 for RTV and EFV). ζ-potential was measured by diluting 0.1 ml of the suspension into 9.9 ml of 10 mM HEPES, pH 7.4 on a Malvern Zetasizer Nano series instrument (Malvern Instruments Inc., Westborough, MA, USA). Final drug content of the formulations was determined by RP-HPLC (data not shown).
Publication 2009

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Publication 2015
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) 1,2-oleoylphosphatidylcholine Alabaster Buffers dioleoyl cephalin Droxidopa Freezing Lipid A Lipids lissamine rhodamine B Magnesium Chloride Sodium Chloride Tromethamine

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Publication 2018
1,2-distearoylphosphatidylethanolamine Annexin A5 Apoptosis Brain Bromides Carbodiimides Cell Culture Techniques Chitosan Chlorides cholesteryl succinate coumarin 6 Decompression Sickness dilactide dioleoyl cephalin Eagle Endothelial Cells Fetal Bovine Serum Fluorescein-5-isothiocyanate lissamine rhodamine B N-hydroxysuccinimide penetratin Phosphates phosphoethanolamine Poly A polyethylene glycol 2000 Polyethylene Terephthalates Propane Rhodamine Saline Solution Tissues Transferrin

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Publication 2008
1,2-oleoylphosphatidylcholine Brain Buffers dioleoyl cephalin Droxidopa Freezing Glycerylphosphorylcholine HEPES Lipid A Lipids lissamine rhodamine B Nitrogen Phosphatidylinositols Phospholipids Pigs polycarbonate Polypropylenes Pulse Rate Serine Silicon Dioxide Sodium Chloride Solvents Unilamellar Vesicles Vacuum

Most recents protocols related to «Lissamine rhodamine B»

Rhodamine labeling of ZF5.3 (synthesized on Rink Amide resin (100–200 mesh) Novabiochem®) was achieved by the incorporation of (S)-2-(Fmoc-amino)-6-azidohexanoic acid at the peptide N-terminus followed by acetylation to generate Ac-Lys(N3)-ZF5.3. The peptide was cleaved from the resin with 82.7% TFA, 5.1% phenol, 5.1% H2O, 5.1% thioanisole, 1% DTT (w/v), and 1% TIPS13 (link). Following cleavage and purification by RP-HPLC, Ac-Lys(N3)-ZF5.3 was reacted with Lissamine Rhodamine B ethylenediamine functionalized with a DBCO (Rho-DBCO). Rho-DBCO was generated by reacting Lissamine Rhodamine B ethylenediamine (#L2424) with 10 molar equivalents of DBCO-NHS ester (#CCT-1491) in DMSO at RT for 1 h. HPLC-purified Rho-DBCO was reacted with Ac-Lys(N3)-ZF5.3 under the same conditions stated above. Final Rho-ZF5.3 was obtained following RP-HPLC and lyophilized and reconstituted as previously described13 (link).
Publication Preprint 2024
Not available on PMC !
Soybean polar lipid extract (SPE, Avanti Polar Lipids), E.coli polar lipid extract (Avanti Polar Lipids), 1,2dipalmitoyl-sn-glycero-3-phosphoethanolamine-N (16:0 sulfonyl lissamine rhodamine B)-(ammonium salt) (16:0 Liss Rhod PE, Avanti Polar Lipids), Glycerol (Sigma-Aldrich), Chloroform (Sigma-Aldrich).
Publication 2024
2 was synthesized in a similar fashion to 1 with the following minor modifications. Rink amide was used and 0.1M Hydroxybenzotriazole (Anaspec) was included in the deprotection solution to limit aspartimide formation. In addition, amino acids following D-Pro were double coupled. Acetylation of the N-terminus was achieved as previously described13 (link). Cleavage and purification were performed under the same conditions as 1. Rhodamine labeling of BBA5.3 was achieved by the incorporation of an N-terminal Boc-Lys(Fmoc)-OH monomer which was selectively deprotected with 20% 4-methyl piperidine and reacted with Lissamine Rhodamine B Sulfonyl Chloride as previously described13 (link).
Publication Preprint 2024
1-Palmitoyl-2-oleoyl-sn-glycerol-3-phosphocholine (POPC) was purchased from Sapphire Bioscience (NSW, Australia), fluorophore lipids: Rh-PE 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) (ammonium salt), and NBD-PE (1-oleoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine-N-[tetra-(ethylene glycol)]-N′-(7-nitro-2-1,3benzoxadiazol-4-yl)) (ammonium salt) were obtained from Avanti Polar Lipids. Milli-Q water was utilised for all the experiments.
Publication 2024
16:0–18:1 1-palmitoyl-2-oleoyl-glycero-3-phosphocholine
(POPC), 16:0–18:1 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-[1′-rac-glycerol]
(POPG), 18:1 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-[lissamine rhodamine B sulfonyl] (Rh-PE), and 18:1 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-[7-nitro-2–1,3-benzoxadiazol-4-yl]
(NBD-PE) were all purchased from Avanti Polar Lipids (Alabaster, AL,
USA).
Publication 2024

Top products related to «Lissamine rhodamine B»

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1,2-dioleoyl-sn-glycero-3-phosphocholine is a synthetic lipid compound. It is a phospholipid that consists of two oleic acid chains attached to a glycerol backbone, with a phosphocholine headgroup.
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1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine is a phospholipid consisting of a glycerol backbone with a palmitic acid and an oleic acid esterified to the first and second carbons, respectively, and a phosphocholine group attached to the third carbon. This compound is a commonly used lipid in various biochemical and biophysical applications.
Sourced in United States, Canada
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine is a synthetic phospholipid product offered by Avanti Polar Lipids. It is a phosphatidylethanolamine lipid with two oleic acid chains attached to a glycerol backbone and a phosphoethanolamine head group.
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Chloroform is a colorless, volatile liquid with a characteristic sweet odor. It is a commonly used solvent in a variety of laboratory applications, including extraction, purification, and sample preparation processes. Chloroform has a high density and is immiscible with water, making it a useful solvent for a range of organic compounds.
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1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) is a phospholipid compound used in laboratory research. It serves as a fluorescent label for the study of lipid dynamics and membrane properties. The compound contains a phosphoethanolamine headgroup, two oleic acid fatty acid chains, and a lissamine rhodamine B fluorophore.
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Cholesterol is a lab equipment product that measures the concentration of cholesterol in a given sample. It provides quantitative analysis of total cholesterol, HDL cholesterol, and LDL cholesterol levels.
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NBD-PE is a fluorescent lipid analog that can be used as a probe in liposome and membrane-based studies. It consists of a phosphatidylethanolamine (PE) headgroup attached to a nitrobenzoxadiazole (NBD) fluorescent moiety. NBD-PE can be incorporated into lipid membranes and its fluorescence properties can be used to study membrane dynamics and interactions.
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Triton X-100 is a non-ionic surfactant commonly used in various laboratory applications. It functions as a detergent and solubilizing agent, facilitating the solubilization and extraction of proteins and other biomolecules from biological samples.
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1,2-dioleoyl-sn-glycero-3-phospho-L-serine is a phospholipid compound used in research applications. It is a synthetic version of the naturally occurring phospholipid phosphatidylserine. The compound consists of a glycerol backbone with two oleic acid chains and a serine head group.
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Calcein is a fluorescent dye used in various laboratory applications. It functions as a calcium indicator, allowing for the detection and measurement of calcium levels in biological samples.

More about "Lissamine rhodamine B"

Lissamine rhodamine B is a versatile fluorescent dye with a wide range of applications in biological and analytical research.
Also known as rhodamine B, this red-fluorescent dye is commonly used as a tracer and stain to visualize cellular structures and track fluid movement.
The dye's ability to bind to proteins and lipids makes it a valuable tool for researchers studying cellular processes and membrane dynamics.
For example, Lissamine rhodamine B can be used to label phospholipids like 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), and 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), as well as cholesterol and other lipid-based molecules.
In addition to its use as a fluorescent probe, Lissamine rhodamine B has also been employed in studies involving chloroform, a common solvent, and detergents like Triton X-100.
Researchers can leverage PubCompare.ai's AI-driven comparison and optimization tools to quickly locate relevant information on the use of Lissamine rhodamine B across scientific literature, preprints, and patents, helping to identify the best products and methods for their specific research needs.
This data-driven approach ensures accurate and reproducible results in studies utilizing this versatile fluorescent dye, whether it's being used to track the movement of calcein, label phospholipids like 1,2-dioleoyl-sn-glycero-3-phospho-L-serine (DOPS), or visualize cellular structures marked with NBD-PE (1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl)).
By empowering researchers with comprehensive, curated information, PubCompare.ai helps streamline the research process and drive scientific discovery.