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Octanoic acid

Octanoic acid, also known as caprylic acid, is a medium-chain fatty acid with a wide range of applications in various scientific and industrial fields.
It is a naturally occurring compound found in the oils of several plant and animal sources.
Octanoic acid has been studied for its potential benefits in areas such as nutrition, cosmetics, and pharmaceuticals.
Researchers often investigate optimal protocols for utilizing octanoic acid in their experiments, aiming to enhance reproducibility and accuracy.
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Most cited protocols related to «Octanoic acid»

Metabolomic profiling was performed using three separate mass spectrometry platforms run in parallel essentially as described previously (Evans et al 2009 (link)). Starting with 100 μl of plasma, small molecules were extracted in an 80 % methanol solution containing four standards (tridecanoic acid, 4-Cl-phenylalanine, 2-flurophenylglycine, and d6-cholesterol) used to monitor extraction efficiency. Clarified supernatant was split into three aliquots and dried under N2. Additional internal standards (Standards for negative ion mode analyses included d7-glucose, d3-methionine, d3-leucine, d8-phenylalanine, d5-tryptophan, Cl-phenylalanine, Br-phenylalanine, d15-octanoic acid, d19-decanoic acid, d27-tetradecanoic acid, and d35-octadecanoic acid. Standards for positive ion mode analyses included d7-glucose, fluorophenylglycine, d3-methionine, d4-tyrosine, d3-leucine, d8-phenylalanine, d5-tryptophan, d5-hippuric acid, Cl-phenylalanine, Br-phenylalanine, d5-indole acetate, d9-progesterone, and d4-dioctylpthalate.) were added to each of three aliquots to control the quality of the chromatographic and mass spectrometric analyses. Each of the three aliquots were analyzed via a unique mass spectrometry assay: (1) gas chromatography coupled mass spectrometry (GC-MS) (2) liquid chromatography coupled mass spectrometry in positive ion mode (LC-MS pos), and (3) LC-MS in negative ion mode (LC-MS neg). For GC-MS analysis, analytes were derivatized using bistrimethyl-silyl-trifluoroacetamide and analyzed on a Trace DSQ fast-scanning single-quadruple mass spectrometer (Thermo-Finnigan). For LC-MS analyses one specimen was resuspended in 50 μl of 6.5 mM ammonium bicarbonate, pH 8, for liquid chromatography mass spectrometry (LC/MS) analysis in negative ion mode the other was resuspended in 50 μl of 0.1 % formic acid in 10 % methanol for LC/MS analysis in positive ion mode. Both resuspension buffers contained instrument internal isotopic standards used to monitor performance and serve as retention index markers. Standards for negative ion mode analyses included d7-glucose, d3-methionine, d3-leucine, d8-phenylalanine, d5-tryptophan, Cl-phenylalanine, Br-phenylalanine, d15-octanoic acid, d19-decanoic acid, d27-tetradecanoic acid, and d35-octadecanoic acid. Standards for positive ion mode analyses included d7-glucose, fluorophenylglycine, d3-methionine, d4-tyrosine, d3-leucine, d8-phenylalanine, d5-tryptophan, d5-hippuric acid, Cl-phenylalanine, Br-phenylalanine, d5-indole acetate, d9-progesterone, and d4-dioctylpthalate. Internal standards were chosen based on their broad chemical structures, biological variety and their elution spectrum on each of the arms of the platform. Chromatographic separation was completed using an ACQUITY UPLC (Waters) equipped with a Waters BEH C18 column followed by analysis with an Orbitrap Elite high resolution mass spectrometer (Thermo-Finnigan) (Evans et al 2009 (link)). For all analytic methods, metabolites were identified by matching the ion chromatographic retention index, accurate mass, and mass spectral fragmentation signatures with reference library entries created from authentic standard metabolites under the identical analytical procedure as the experimental samples (Dehaven et al 2010 (link)).
Publication 2015
Acetate Acids ammonium bicarbonate Arm, Upper Biological Assay Biopharmaceuticals Buffers Cholesterol Chromatography decanoic acid DNA Library formic acid Gas Chromatography-Mass Spectrometry Glucose hippuric acid indole Isotopes Leucine Liquid Chromatography Mass Spectrometry Methanol Methionine Myristic Acid octanoic acid Phenylalanine Plasma Progesterone Retention (Psychology) stearic acid trifluoroacetamide Tryptophan Tyrosine
Mosquitoes The colony of Anopheles gambiae sensu stricto (hereafter An. gambiae) was maintained at Wageningen University, The Netherlands, and originally obtained from Suakoko, Liberia (courtesy Prof. M. Coluzzi, Rome, Italy). The mosquitoes have been cultured in the laboratory since 1988 with blood meals from a human arm twice a week. The mosquito colony was kept in a climate room at 27 ± 1°C, 80 ± 5% RH and a photo-scotophase of 12/12 h L/D. Adult mosquitoes were maintained in 30 × 30 × 30 cm gauze cages with access to a 6% glucose solution on filter paper. Larvae were reared on tap water in plastic trays and fed daily with Tetramin® baby fish food (Melle, Germany). Pupae were collected daily and placed into adult cages for emergence.
Olfactometer A dual-port olfactometer, consisting of a flight chamber (1.60 x 0.66 × 0.43 m) with glass walls and a Luxan top, was used to study the behavioral responses of female mosquitoes to different odor stimuli. Pressurized air was charcoal filtered, humidified, and led through two Perspex mosquito trapping devices connected to two ports (4 cm diam and 28 cm apart) in the flight chamber (flow rate of 20.6 ± 1.4 cm/s). The light from one tungsten light bulb (75 Watt) was filtered and scattered through a screen of yellow cloth hanging ± 1 m above the flight chamber. This resulted in dim light of about 1 Lux in the olfactometer. The experimental room was maintained at 27 ± 1°C and a relative humidity of 61 ± 9% RH. The temperature inside the flight chamber was 27 ± 2.5°C and 64 ± 9% RH. The air flowing out of the ports was maintained above 80% RH and an air temperature of 27.4 ± 1°C.
Odor Stimuli Tested In The Olfactometer To insure a continuous and constant odor concentration for each compound within the odor plumes from start until the end of each experiment, we used air sample bags for ammonia, glass bottles for L-(+)-lactic acid, and 15 aliphatic carboxylic acids (Geier et al. 1999 (link); Bosch et al. 2000 (link)).Ammonia was supplied in a similar way as described in Smallegange et al. (2005 (link)). One day before the experiments, 250 μl of a 2.5% aqueous ammonia solution (25% in water; analytical grade, Merck) were injected into an 80 l Teflon air sample bag (SKC Gulf Coast Inc., Houston, TX, USA). Subsequently, the bag was filled with 60 l of warm, humidified, and charcoal filtered pressurized air at least 17 h prior to experiments to allow evaporation of the solution. This procedure resulted in an ammonia concentration of 136 ppm in the bag (Smallegange et al. 2005 (link)). During experiments, air pumps (Model 224-PCXR4, SKC Gulf Coast Inc., Houston, TX, USA) were used to lead air from the sample bag, through Teflon tubes (7 mm in diam; Rubber B.V., Hilversum, The Netherlands), and into the trapping devices at a flow of 230 ml/min. The flow of air was regulated by mechanical flow meters (Sho-Rate model GT1355; Brooks Instruments, Veenendaal, The Netherlands), and was mixed with the main air stream at a flow rate of approximately 23.5 l/min.L-(+)-lactic acid (90% aqueous solution, analytical grade, Purac Bioquimica or 88–92% aqueous solution, Riedel-de Haën) (henceforth termed lactic acid) was mixed with the main air stream by tapping lactic acid vapor (10 ml) from a 250 ml glass bottle (Fisher Scientific B.V., ‘s Hertogenbosch, The Netherlands) with Teflon tubing. The flow rate was regulated to 15 ml/min by flow meters (Gilmont, Fisher Scientific B.V., ‘s Hertogenbosch, The Netherlands), which caused a lactic acid release comparable to that from a human hand (Smith et al. 1970 (link); Geier et al. 1999 (link)). Since we applied lactic acid in a different way compared to previous experiments (Smallegange et al. 2005 (link)), we verified that it had no additional effect on the response of mosquitoes when added to ammonia.Fifteen saturated aliphatic carboxylic acids (C2–C16) of the highest purity grade available were used in the experiments: >99% acetic acid (Sigma), 99% propanoic acid (Sigma), 99% 2-methylpropanoic acid (Sigma), ≥99% 3-methylbutanoic acid (Sigma), >99% butanoic acid (Aldrich), >99% pentanoic acid (Sigma), ≥99% hexanoic acid (Sigma), 98% heptanoic acid (Sigma), ≥ 99% octanoic acid (Sigma), ≥ 97% nonanoic acid (Sigma), >99% decanoic acid (Sigma), ≥99% dodecanoic acid (Sigma), ≥ 98% tridecanoic acid (Sigma), >99% tetradecanoic acid (Sigma), ≥99% hexadecanoic acid (Sigma). Single, pure compounds [10 ml of a liquid compound (C2–C9) or 1 g of a solid compound (C10–C16)] were added to a 250 ml glass bottle (Fisher Scientific B.V., ‘s Hertogenbosch, The Netherlands). A charcoal-filtered, warm, humidified air stream was passed through the bottle and carried the vaporized compound at the desired flow rate through Teflon tubing and into the main stream through one of the trapping devices. Flow rates were regulated by Gilmont flow meters (Fisher Scientific B.V., ‘s Hertogenbosch, The Netherlands) at 0.5, 5, 50, and 100 ml/min. The calculated concentrations of the compounds in the air stream of the olfactometer are listed in Table S1 in the online supplement.When tripartite blends were tested, the three compounds were mixed just before entering the trapping device. When more than one aliphatic carboxylic acid was part of the blend, a Perspex ring with 10 holes was attached upstream of each trapping device to be able to release each odor into the main air stream individually (Fig. 1). Tripartite blends were tested against ammonia alone. During experiments with multi-component blends, the multi-component odor blends were tested against the ammonia + lactic acid blend. Initially, we wanted to examine whether we could increase the attractiveness of ammonia—our best kairomone at that time. For this reason, we used ammonia alone as a control. In addition, we had observed that ammonia + lactic acid + a mixture of 12 carboxylic acids did not attract more mosquitoes than ammonia + lactic acid, but was more attractive than ammonia alone (Smallegange et al. 2005 (link)). Once we determined which individual carboxylic acids augmented the attractiveness of ammonia + lactic acid (Table 1), we continued our experiments with ammonia + lactic acid as the control, as we aimed for a better result than was found in Smallegange et al. (2005 (link)).

An olfactometer trapping device is composed of three parts: A: part with baffle where mosquitoes enter the device; B: middle part device; C: distal end sealed with metal gauze to prevent mosquito crossing. A Perspex ring (D) with 10 holes for separate odor delivery. The end of the tube running from the glass bottle with an odor was inserted through one of the holes. Charcoal filtered, warm, humidified, pressurized air is led into the trapping device through E (a: schematic representation of the couplings between the various parts, made to fit smoothly on each other to prevent air loss)

Effect of adding an individual carboxylic acid, at four flow rates (ml/min), to ammonia + lactic acid tested against ammonia alone in the dual-choice olfactometer. The result of the χ2-test (P-value), trap entry response (%) and total number of mosquitoes released (n) are given for each two-choice test

Carboxylic acid0.5 ml/min5 ml/min50 ml/min100 ml/min
Acetic acid (C2)P = 0.25P = 0.24P = 0.85P = 0.56
24.1%22.5%14.4%15.3%
n = 199n = 262n = 201n = 177
Propanoic acid (C3)P = 0.13P < 0.001 AP = 0.59P = 0.001 A
15.7%21.2%8.8%20.8%
n = 178n = 156n = 160n = 154
2-Methylpropionic acid (2mC3)P = 1.00P = 0.38P = 0.34P = 0.22
8.2%18.9%30.5%39.9%
n = 170n = 175n = 174n = 198
Butanoic acid (C4)P = 0.03 AP = 0.69P = 0.53P = 0.47
24.7%11.6%6.1%11.0%
n = 150n = 225n = 164n = 155
3-Methylbutanoic acid (3mC4)P = 0.008 AP = 0.64n.t.n.t.
16.6%10.2%
n = 169n = 176
Pentanoic acid (C5)P = 0.13P = 0.32P = 0.86P = 0.01 A
6.3%20.6%18.5%39.4%
n = 174n = 175n = 178n = 175
Hexanoic acid (C6)P = 0.003 RP = 0.66P = 0.88P = 0.73
19.7%17.5%26.3%15.7%
n = 234n = 468n = 179n = 464
Heptanoic acid (C7)P = 0.03 AP = 0.005 RP = 0.007 RP = 0.85
8.8%11.0%13.5%15.4%
n = 226n = 164n = 170n = 175
Octanoic acid (C8)P = 0.30P = 0.47P < 0.001 AP = 0.23
13.5%16.0%29.5%29.2%
n = 170n = 187n = 193n = 195
Nonanoic acid (C9)P = 0.78P = 0.41P = 0.16P = 0.53
7.6%13.5%4.5%5.6%
n = 170n = 178n = 177n = 177
Decanoic acid (C10)P = 0.32P = 1.00P = 1.00P = 0.53
4.1%6.9%3.7%4.5%
n = 219n = 232n = 215n = 221
Dodecanoic acid (C12)P = 0.47P = 1.00P = 1.00P = 0.78
9.4%8.9%4.4%7.3%
n = 180n = 180n = 180n = 178
Tridecanoic acid (C13)P = 0.26P = 0.82P = 0.09P = 0.58
23.4%11.3%25.4%17.3%
n = 167n = 168n = 169n = 168
Tetradecanoic acid (C14)P = 0.02 AP = 0.04 AP = 0.007 AP = 0.01 A
8.7%11.2%11.5%12.7%
n = 173n = 170n = 174n = 173
Hexadecanoic acid (C16)P = 0.06P = 0.37P = 0.74P = 0.80
5.7%6.3%5.2%8.5%
n = 175n = 176n = 172n = 177

A: significantly more mosquitoes in the trapping device baited with the tripartite blend compared to the trapping device baited with ammonia (χ2-test, P < 0.05). R: significantly fewer mosquitoes in the trapping device baited with the tripartite blend compared to the trapping device baited with ammonia (χ2-test, P < 0.05). Calculated concentrations of the compounds in the odor plume are given in the online supplement (Table S1).

n.t. not tested

Olfactometer Tests Thirty female mosquitoes, 5–8 d-old, that had not received a blood meal, were randomly collected from their cage 14–18 h before the start of experiments. The mosquitoes were placed into a cylindrical release cage (8-cm diam, 10-cm high) with access to tap water from damp cotton wool placed on top of the cage. Experiments were performed during the last 4 h of the dark period, when An. gambiae is normally active (Haddow and Ssenkubuge 1973 ; Maxwell et al. 1998 (link); Killeen et al. 2006 (link)).In each trial, test compounds were released into the air stream and a group of mosquitoes was set free from a release cage placed at the downwind end of the flight chamber of the olfactometer, 1.60 m from the two ports. Mosquitoes were left in the flight chamber for 15 min. Female mosquitoes that had entered either of the trapping devices were counted at the end of the experiment, after anaesthetization with 100% CO2. Mosquitoes remaining in the flight chamber were removed with a vacuum cleaner. After use, the trapping devices were washed with soapy water (CLY-MAX Heavy Duty Cleaner, Rogier Bosman Chemie B.V., Heijningen, The Netherlands), rinsed with tap water, and cleaned with cotton wool drenched in 70% ethanol (Merck).The operator wore surgical gloves (Romed®, powderfree vinyl) to avoid contamination of the equipment with human volatiles. Each trial started with new mosquitoes and clean trapping devices. An experiment testing a particular blend was repeated at least 6 times on different days. The sequence of test odors was randomized on the same day and between days. Test stimuli were alternated between right and left ports in different replicates to rule out any positional effects. Experiments in which only clean air was fed into the olfactometer through both ports were done to test the symmetry of the trapping system.
Trapping Experiments in Screen Cage To assess the performance of some of the blends as a lure, we conducted laboratory experiments with volatile baited MM-X traps in a textile screen cage (233 × 250 × 330 cm; Howitec Netting BV, Bolsward, The Netherlands) inside a climate-controlled room (22.7 ± 1.1°C and 52.4 ± 7.4% RH). Two Mosquito Magnet-X (MM-X) traps (American Biophysics Corp., U.S.A.) (Kline 1999 (link)) were placed inside the cage at 2 m distance from each other.Initially, a 9-compound blend (blend A) was tested. To compose this blend, 500 µl of a liquid pure compound or 500 mg of a solid compound (tetradecanoic acid) were put into individual low density polyethylene sachets (LDPE; 6 × 6 cm; Audion Elektro, The Netherlands; Torr et al. 1997 (link)) with a thickness of 0.1 mm (ammonia, lactic acid, heptanoic, octanoic, and tetradecanoic acid) or in a closed LDPE tube (32 × 14 mm, Kartell, 3.5 ml; Fisher Emergo, The Netherlands) within an LDPE sachet with a thickness of 0.2 mm (this delivery method was used for the 4 most volatile aliphatic carboxylic acids (i.e., propanoic, butanoic, 3-methylbutanoic, and pentanoic acids) to reduce their release to a higher extent than would have been possible with a sachet only). Only ammonia was diluted with distilled water (to 2.5%). The sachets were applied inside the central, black tube of the MM-X traps using odorless tape (3M™ Double Coated Tape 400). Air flow was created by a fan on top of this tube taking the headspace of the test blend downwards and outside the MM-X trap. Second, a tripartite blend was tested (blend B). Since we calculated that the release rates of the aliphatic carboxylic acids in blend A were at least two times higher than calculated for the multi-component blends tested in the optimization and subtraction olfactometer experiments, the 3 LDPE sachets (each with a thickness of 0.1 mm) containing the separate components of blend B were made as small as possible (2.5 × 2.5 cm) to reduce evaporation (Torr et al. 1997 (link)). One hundred µl of a liquid pure compound (ammonia, lactic acid) or 50 mg of a solid compound (tetradecanoic acid) were put into individual LDPE sachets. The amount of a compound within a sachet does not affect the evaporation rate of the compound through the LDPE material, whereas the surface of a LDPE sachet does (Torr et al. 1997 (link)). When blend B was applied, ammonia was not diluted (25.0%). Both blend A and B were tested against a blend of ammonia + lactic acid. Evaporation rates of the compounds were measured by weighing the LDPE sachets before and after experiments (see Table S1 in the online supplement).Fifty female mosquitoes, 5–8 d-old, which had not received a blood meal, were randomly collected 14–18 h before the start of experiments. They were placed into a cylindrical release cage (diam 8 cm, height 17.5 cm) with access to tap water from damp cotton wool placed on top of the cage. The mosquitoes were set free from the release cage in the center of the screen cage. After 4 h, the MM-X traps were closed and transferred into a freezer to kill the mosquitoes. These experiments were performed during the last 4 h of the dark period. Each two-choice test was repeated either 4 or 6 times, alternating the position of each treatment every experimental day. Surgical gloves were worn to avoid contamination of equipment with human volatiles. Experiments with unbaited traps in the MM-X setup were done 6 times to test the symmetry of the trapping system.
Statistical Analysis For each two-choice assay, a Chi-square test was used to analyze whether the total number (i.e., sum of all replicates; a comparison of data collected on different days revealed no heterogeneity) of mosquitoes trapped in the treatment trapping device (of either olfactometer or MM-X trap) and the total number that was trapped in the control trapping device (of olfactometer or MM-X trap) differed from a 1:1 distribution. Effects were considered to be significant at P < 0.05. The number of female mosquitoes caught in both trapping devices divided by the number of mosquitoes that flew out of the release cage is expressed as the trap entry response (TER).
Publication 2009
For the fabH deletion strains the cfa derivatives of YFJ315 (carrying the aasS plasmid pYFJ85), YFJ316 (carrying the vector pBAD24) and YFJ317 (no plasmid) together with the corresponding wild type strain CHC41 (UB1005 cfa::Kan) were grown at 37oC either in LB or in LB supplemented with 0.5 mM octanoic acid and 0.2% arabinose. Derivatives of strains K19, K27 or JWC255 carrying either pYFJ85 or pBAD24 were grown overnight in LB containing 15 μM [1-14C]-labeled fatty acid (50–55 mCi/mmol), ampicillin (100 μg/ml) and various concentrations of arabinose. Phospholipids were extracted by the method of Bligh and Dyer (11 (link)) whereas lipid A was obtained by the following procedure. Labeled cells were recovered by filtration using solvent-resistant 0.2 μm syringe filters (Chromafil Xtra PET-20–25 from Macherey-Nagel) and washed several times with LB to remove unincorporated fatty acids. The filters were then washed 3 times with 10 ml of chloroform-methanol (1/2, v/v) to remove phospholipids. Forcing air through them dried the filters. Each filter was then connected to a fresh syringe that was used to draw 1 M KOH into the filter and the syringe plunger was partially withdrawn to seal the top of the filter and impede drainage of the KOH by creation of a vacuum. The filters were then incubated at 42oC for three days to hydrolyze the ester-linked fatty acids. The KOH was then expelled from the filter, acidified and the fatty acids recovered by Bligh-Dyer extraction. The fatty acids were analyzed by reverse phase chromatography on Partisil KC18 thin layer plates of octadecyl-modified silica gel 60 (Whatman) using a solvent system of acetonitrile-acetic acid-acetone (7:1:1, by volume) followed by autoradiography. Note that only the ester-linked lipid A acyl groups were analyzed since amide-linked 3-hydroxytetradecanoate moieties are not released by base treatment. The phospholipid acyl chains were analyzed as their methyl esters which were obtained by base catalyzed transesterification (12 ).
The methyl esters were analyzed by reverse phase chromatography as above, except that the solvent was acetonitrile-methanol-water (65/35/0.5) by volume or by argentation thin layer chromatography on 20% AgNO3 (Analtech Silica Gel GHL) plates developed twice in toluene at −20oC followed by autoradiography. The chromatograms were dried and exposed to Kodak BioMax XAR film. Mass spectral analyses of the fatty acid compositions of the membrane phospholipids was done as described previously (13 (link)) on phospholipid extracts from cultures grown overnight with the fatty acid to be tested at 0.1 mM final concentration.
Publication 2010
Acetic Acid Acetone acetonitrile Amides Ampicillin Arabinose Autoradiography Cells Chloroform Chromatography, Reverse-Phase Cloning Vectors Deletion Mutation derivatives Drainage Esters Fatty Acids Filtration Lipid A Methanol octanoic acid Phocidae Phospholipids Plasmids Silica Gel Solvents Strains Syringes Thin Layer Chromatography Tissue, Membrane Toluene Vacuum
Odorant induced Cl currents, resulting from cAMP mediated activation of the co-expressed CFTR reporter channel (Uezono et al., 1993 (link)), were measured 2-4 days after cRNA injection using two-electrode voltage clamp in an automated parallel electrophysiology system (OpusExpress 6000A, Molecular Devices). Micropipettes were filled with 3M KCl and had resistances of 0.2-2.0 MΩ. The holding potential was −70 mV. Current responses, filtered (4-pole, Bessel, low pass) at 20 Hz (−3db) and sampled at 100 Hz, were captured and stored using OpusXpress 1.1 software (Molecular Devices). Initial analysis was done using Clampfit 9.1 software (Molecular Devices). Oocytes were perfused with ND96 (in mM: 96 NaCl, 2 KCl, 1 CaCl2, 1 MgCl2, 5 HEPES, pH 7.5). Odorants were stored under argon and high concentration (1M) stock solutions of each odorant were prepared in DMSO. Each odorant, diluted in ND96, was applied for 15 sec (Abaffy et al., 2006 (link)). IBMX (1 mM) was used to activate the CFTR in a receptor independent manner. This occurs both through the inhibition of phosphodiesterase and consequent increase in cAMP concentration, and through a direct action on the CFTR (Schultz et al., 1999 (link)). The CFTR can be directly activated by a wide variety of structures (Ma et al., 2002 (link)). Thus, to guard against false positives, all compounds (at all concentrations) used in our studies were tested with oocytes expressing Gαolf and CFTR, but no odorant receptors (termed “R-” oocytes). Oocytes are generally stable under voltage clamp for one to several hours, providing a useful platform for ligand screening. The oocytes used to screen MOR23-1 (recordings from one of these oocytes are shown in Fig. 2) were unusually stable, providing 8 hours of recordings. All four recordings in Figure 2 were obtained from the same oocyte (one of 8 oocytes in the screen).
To explore the molecular receptive range, each MOR was screened with a panel of odorants, each at 100μM. The odorant panel consisted of 41 saturated, aliphatic primary alcohols, aldehydes, monocarboxylic acids, bromocarboxylic acids and dicarboxylic acids, ranging in length from 4 to 12 carbons. Some bromocarboxylic acids in the length series could not be obtained. Odorants were applied for 15 sec (Abaffy et al., 2006 (link)), followed by a 10 min wash with ND-96. Each odorant that elicited a statistically significant MOR response at 100 μM was also screened at 30 μM, 10 μM and 3 μM. The statistical significance of receptor responses was determined by comparison to the response of R- oocytes to the same odorant. For each odorant yielding a response, the mean R- response for that odorant was subtracted from the MOR response and the resulting value was then normalized to the response of the same oocyte to 100 μM of the normalizing ligand (nonanoic acid for MOR23-1, MOR32-11 and MOR40-4; undecanoic acid for MOR31-4). These normalized responses are presented as mean ± SEM. We previously observed that small to moderate current responses (≤ 1.5 μA) could be elicited repeatedly, with no loss of amplitude (Abaffy et al., 2006 (link)). However, when current amplitudes are large (> 1.5 μA), subsequent current responses can be partially suppressed for many minutes (data not shown). This suppression does not correlate with odorant concentration, but instead appears to be associated with large current amplitudes, suggesting that this temporary suppression occurs within the signal transduction pathway. Thus, during ligand screening, applications that occurred less than 30 minutes following a large response (> 1.5 μA) were redone with a separate set of oocytes. For dose-response analysis, each odorant response was normalized to an immediately preceding normalizing application (3 μM octanoic acid for MOR23-1; 3 μM dodecanoic acid for MOR31-4; 30 μM octanoic acid for MOR32-11; 30 μM undecanal for MOR40-4). Normalized data were fit using Prism 4 (Graphpad, San Diego, CA) according to the equation: I = Imax/(1+(EC50/X)n) where I represents the current response at a given concentration of odorant, X; Imax is the maximal response; EC50 is the concentration of odorant yielding a half maximal response; n is the apparent Hill coefficient. Statistical significance was assessed with Prism 4 (Graphpad, San Diego, CA) using a two-tailed unpaired t-test, or a one-way ANOVA followed by the Dunnett's post-test, as appropriate.
Publication 2009
Membrane fluidity can be measured as a fluorescence polarization or anisotropy value, which corresponds to how a fluorescent probe inside the membrane reacts to polarized light (Mykytczuk et al. 2007 (link)). Harvested cells were treated according to the protocol described by Beney et al. (2004 (link)). Briefly, the samples were washed twice in PBS, pH = 7.0, resuspended (1 × 108 cells/ml), and incubated at 37 °C for 30 min with 1,6-diphenyl-1,3,5-hexatriene (DPH; supplied by Life Technologies, Carlsbad, CA, USA) at a concentration of 0.2 μM (0.2 mM stock solution in tetrahydrofuran). Fluorescence polarization values were determined by using a Synergy 2 Multi-Mode microplate reader from BioTek using sterile black-bottom Nunclon delta surface 96-well plates. The filters were 360/40 nm fluorescence excitation and 460/40 nm fluorescence emission filters from BioTek. The excitation polarized filter was set in the vertical position. The emission polarized filter was set either in the vertical (IVV) or horizontal (IVH) position. The polarization value is calculated by the following formula: P=IVVIVHGIVV+IVHG, where G is the grating factor, assumed to be 1. The cells were treated with octanoic acid at pH 7.0 just before measurements.
Publication 2013
Anisotropy Cells diphenyl Fluorescence Fluorescence Polarization Fluorescent Probes Light Membrane Fluidity octanoic acid Sterility, Reproductive tetrahydrofuran Tissue, Membrane

Most recents protocols related to «Octanoic acid»

For octanoic acid production experiments, strains expressing CpFatB1* under various modes of control (Supplementary file 2) were cultured in LB overnight with light illumination to maintain low CpFatB1* expression. Overnight cultures were diluted 1:20 into M9 minimal media with 2% glucose and kept in the light until they reached early stationary phase (OD600 of 0.6) unless otherwise noted. The LPA was then programmed to either maintain light for low octanoic acid production or turn off light exposure to induce octanoic acid production for 24 hr prior to fatty acid extraction and quantification.
Publication 2024
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For octanoic acid production experiments, strains expressing CpFatB1* under various modes of control (Table S2) were cultured in LB overnight with light illumination to maintain low CpFatB1* expression. Overnight cultures were diluted 1:20 into M9 minimal media with 2% glucose and kept in the light until they reached early stationary phase (OD 600 of 0.6) unless otherwise noted. The LPA was then programmed to either maintain light for low octanoic acid production or turn off light exposure to induce octanoic acid production for 24 hours prior to fatty acid extraction and quantification.
Publication 2024
In a 25 mL round bottom flask 1.25 mmol of Se was added to 10 mL of the solvent. The suspension was degassed for 1 h at 100 °C, followed by heating the mixture, under N2, to 160 °C for 10 minutes. The temperature was then set to 220 °C for 30 minutes. While hexadecane remained colorless, deep orange suspensions were obtained for ODE and octanoic acid. The solvents turned orange (ODE) and pale yellow (octanoic acid) after returning to room temperature. The reaction mixtures were transferred in a glovebox and passed through a 450 μm pore size syringe filter to remove eventual unreacted selenium mesh. The final products were stored in a glovebox.
Publication 2024
A 4.3 g quantity of sodium hydroxide was dissolved in 10 times its weight of water, stirred, and then combined with 8 g of intermediate 2. The mixture was reacted at 90°C–100°C for 3–6 h, monitored using the TLC plate (DCM: MeOH = 10:1). Upon completion of the reaction, the mixture was subsequently cooled to room temperature, following which impurities were extracted once using dichloromethane (DCM). Verification was performed via TLC analysis. The aqueous phase was then adjusted to a pH range of 3–5 using 3 N hydrochloric acid, resulting in the precipitation of solid material. After filtration by suction, the solid was rinsed with water and dried at 60°C for approximately 4 h, yielding a 94.0% yield.
Publication 2024

Example 4

Octanoic acid (18.3 μL) was charged in a 50 mL falcone tube, and a human serum albumin solution B (15 mL, 10%, Sigma) after a fatty acid removal treatment was added. The solution was shaken at 37° C. for 7 hours, left standing at 4° C. overnight, and filtered with a 0.22 μm syringe filter. In this way, an albumin re-adsorbed with octanoic acid was obtained. The amount of fatty acid carried by albumin re-adsorbed with octanoic acid was measured, and the albumin after re-adsorption with octanoic acid and a purified albumin before re-adsorption and after a fatty acid removal treatment were appropriately mixed while adjusting the ratio such that the final concentration of octanoic acid in the medium was 28 μM or 57 μM. The mixture was added to a medium such that the final concentration of albumin was 2.6 g/L.

As for oleic acid, stearic acid, palmitic acid, linoleic acid, linolenic acid and arachidonic acid, re-adsorption of fatty acid was performed in the same manner. The final concentration in and the amount of addition to the medium are also the same.

Using the medium produced as mentioned above, the influence of each fatty acid on the proliferation of iPS cells was studied. A 6-well plate coated with a fragment containing an active domain of laminin 511 at 5 μg/well (iMatrix-511 (Nippi, Incorporated)) as a basal membrane matrix was used. iPS cells were single-cell seeded at 13,000 cells/well and cultured for 1 week. Y-27632 (NACALAI TESQUE, INC.: 08945-84) was added at a final concentration of 10 μM only to a medium to be used for seeding. As a positive control, iPS cells were cultured using an albumin free of re-adsorption of fatty acid, i.e., albumin after a fatty acid removal treatment.

The cells were detached from each well by TrypLE Select (Life Technologies: 12563-011), and the number of the viable cells was measured. FIG. 4 shows mean of three independent experiments for each group.

When stearic acid, palmitic acid and arachidonic acid were re-adsorbed, the cells died at both 28 μM and 57 μM, and viable cells could not be obtained. Linoleic acid and linolenic acid had a strong proliferation inhibitory action on iPS cells, and the cells died by re-adsorption at 57 μM, and the proliferation of iPS cells was markedly suppressed even by re-adsorption at 28 μM, as compared to the positive control. Even when oleic acid was re-adsorbed, a concentration-dependent cell proliferation inhibitory action was found, and the number of viable cells was smaller than that of the positive control for both 28 μM and 57 μM. In the case of octanoic acid, however, a certain cell proliferation inhibitory action was found by re-adsorption at 57 μM, but the number of viable cells was equivalent to that of the positive control by re-adsorption at 28 μM. From these studies, it was demonstrated that when oleic acid, stearic acid, palmitic acid, linoleic acid, linolenic acid or arachidonic acid is re-adsorbed to albumin, the albumin shows an inhibitory action on the proliferation of iPS cells, irrespective of the concentration of addition. When octanoic acid is re-adsorbed, it was demonstrated that the number of viable cells is equivalent to that of the positive control depending on the concentration of re-adsorption, and the inhibitory action thereof is low.

From the above, it was shown that long chain fatty acids such as oleic acid and the like have strong toxicity to iPS cells and a high proliferation inhibitory action as compared to middle fatty acids such as octanoic acid and the like.

Patent 2024

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Octanoic acid is a saturated aliphatic carboxylic acid with the chemical formula CH3(CH2)6COOH. It is a colorless, oily liquid with a characteristic odor. Octanoic acid is primarily used as a chemical intermediate in the production of various compounds, including esters, surfactants, and perfumes.
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Hexanoic acid is a carboxylic acid with the chemical formula CH3(CH2)4COOH. It is a colorless liquid with a characteristic unpleasant odor. Hexanoic acid is used as a precursor in the synthesis of various organic compounds and as a component in certain industrial and laboratory applications.
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Decanoic acid is a saturated fatty acid with the chemical formula CH3(CH2)8COOH. It is a colorless, oily liquid that is commonly used in laboratory applications. Decanoic acid has a variety of chemical and physical properties that make it useful in various experimental and analytical procedures.
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Acetic acid is a colorless, vinegar-like liquid chemical compound. It is a commonly used laboratory reagent with the molecular formula CH3COOH. Acetic acid serves as a solvent, a pH adjuster, and a reactant in various chemical processes.
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Oleic acid is a long-chain monounsaturated fatty acid commonly used in various laboratory applications. It is a colorless to light-yellow liquid with a characteristic odor. Oleic acid is widely utilized as a component in various laboratory reagents and formulations, often serving as a surfactant or emulsifier.
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Ethyl hexanoate is a colorless, volatile, and flammable organic compound. It is commonly used as a flavoring agent and solvent in various industries. Ethyl hexanoate has a fruity, sweet aroma and is naturally found in some fruits and fermented products.
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Dodecanoic acid is a saturated fatty acid with the chemical formula CH3(CH2)10COOH. It is a white, waxy solid at room temperature. Dodecanoic acid is a common component of various natural fats and oils, and it is used in a variety of industrial and commercial applications.
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Benzaldehyde is a clear, colorless liquid with a characteristic almond-like odor. It is a widely used organic compound that serves as a precursor and intermediate in the synthesis of various chemicals and pharmaceuticals.
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Butyric acid is a short-chain fatty acid that is commonly used in laboratory settings. It is a colorless liquid with a distinctive odor. Butyric acid is a key component in various biochemical and analytical processes, serving as a versatile tool for researchers and scientists.

More about "Octanoic acid"

Octanoic acid, also known as caprylic acid, is a medium-chain fatty acid with a wide range of applications in various scientific and industrial fields.
It is a naturally occurring compound found in the oils of several plant and animal sources, including coconut, palm kernel, and animal fats.
Octanoic acid has been studied for its potential benefits in areas such as nutrition, cosmetics, and pharmaceuticals.
Researchers often investigate optimal protocols for utilizing octanoic acid in their experiments, aiming to enhance reproducibility and accuracy.
Closely related terms include hexanoic acid (caproic acid), decanoic acid (capric acid), acetic acid (ethanoic acid), oleic acid, ethyl hexanoate, ethyl acetate, dodecanoic acid (lauric acid), benzaldehyde, and butyric acid.
These compounds share similarities in their chemical structures and properties, and may have overlapping applications.
PubCompare.ai's AI-driven platform can help scientists locate the best protocols from literature, preprints, and patents, enabling them to idnetify the optimal approach for their specific research needs.
By providing side-by-side comparisons, the platform streamlines the research process and supports the advancement of octanoic acid-related studies, ultimately contributing to the progress of various fields.