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Polychlorodibenzo-4-dioxin

Polychlorodibenzo-4-dioxin is a highly toxic environmental contaminant and a known carcinogen.
It is a member of the dioxin family of chemicals, formed as a byproduct during the manufacturing of certain pesticides and herbicides.
Exposure to polychlorodibenzo-4-dioxin can have severe health effects, including reproductive and developmental disorders, immunotoxicity, and endocrine disruption.
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Most cited protocols related to «Polychlorodibenzo-4-dioxin»

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Publication 2021
Brominated Diphenyl Ethers Creatinine Dibenzofurans, Polychlorinated DNA Replication Freezing Homo sapiens Lipids Non-Smokers Pesticides Phenols phthalate Polychlorinated Dibenzodioxins Polychlorodibenzo-4-dioxin Polycyclic Hydrocarbons, Aromatic Serum Tobacco Products Urine

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Publication 2010
Buffers Cell Culture Techniques Cells Dioxins FM 100 Freezing Gene Expression Hepatocellular Carcinomas Hyperostosis, Diffuse Idiopathic Skeletal Ligands Luciferases Luciferases, Firefly Mus Phosphates Plasmids Polychlorodibenzo-4-dioxin Promega Safety Saline Solution Solvents Sulfoxide, Dimethyl Technique, Dilution Tetrachlorodibenzodioxin Tissues
Molecular docking was carried out using Glide program57 (link),58 (link),66 included in Maestro 9v0.73 Glide uses a hierarchical series of filters to search for possible locations of the ligand in the active-site region of the receptor. The shape and properties of the receptor are represented on a grid by several different sets of fields that provide progressively more accurate scoring of the ligand poses. Ligand conformational flexibility is handled in Glide by an extensive conformational search, augmented by a heuristic screen that rapidly eliminates unsuitable conformations. The final scoring of the poses is carried out using Schrödinger’s proprietary GlideScore multi-ligand scoring function.
Grids for mAhR homology models were set up using default parameters. The binding box was centered in the averaged X, Y, Z coordinates of the three THS ligands centroids with 12 Å sides length. Flexible ligand docking was carried out in standard precision (SP) approach saving only one final pose. All the other parameters are the default ones.
The rescoring of the energy minimized complexes was performed using Glide extra precision (XP) scoring function.53 (link) All the other parameters are the default ones.
The rescoring of the PCDD docking poses into the rtAhR model was performed by molecular mechanics generalized Born/surface area (MM-GBSA), which uses MD simulations of the free ligand, free protein, and their complex as a basis for calculating the binding free energy of protein-ligand complexes. This calculation was performed using Prime MM-GBSA,67 excluding entropic terms, with a flexible receptor shell within 8 Å from the ligand.
Publication 2011
Binding Proteins Childbirth Entropy Ligands Mechanics Polychlorodibenzo-4-dioxin Proteins
All pollutant data posted by the NCHS before December 2008 were accessed and downloaded, which yielded 196 pollutants from 17 subclasses as categorized by the NCHS: serum perfluorinated compounds; urinary heavy metals; urinary total arsenic and speciated arsenics; urinary total (elemental plus inorganic) mercury; serum organochlorine pesticides; serum polybrominated diphenyl ethers (PBDEs); urinary polyaromatic hydrocarbons; urinary phthalates; serum polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs), and coplanar polychlorinated biphenyls (PCBs); serum non–dioxin-like PCBs; urinary organophosphate insecticides; urinary perchlorate; urinary environmental phenols; urinary iodine; blood lead, mercury (total and inorganic), and cadmium; serum cotinine; and blood volatile organic compounds [for the full list of chemicals in each subclass, see Supplemental Material, Table 1 (doi:10.1289/ehp.1002720)]. An additional subclass, coplanar PCBs, was constructed by selecting only these chemicals from the broader “PCDDs, PCDFs, and coplanar PCBs” subclass. A second subclass for total PCBs was then created by combining the non–dioxin-like PCBs and coplanar PCBs subclasses.
All ALT and pollutant levels were measured in biologic samples collected on the same day from each individual participant. We evaluated only pollutants with a ≥ 60% detection rate [111 of 196 pollutants; see Supplemental Material, Table 1 (doi:10.1289/ehp.1002720)] to avoid bias in estimation for those pollutants with levels < the lower limit of detection (Lee et al. 2007a (link), 2007b (link)). Concentrations of organic pollutants measured in serum (non–dioxin-like PCBs; dioxins, furans, coplanar PCBs; PBDEs; organochlorine pesticides) were lipid adjusted, and concentrations of pollutants measured in urine were adjusted for creatinine [Supplemental Material, Table 1 (doi:10.1289/ehp.1002720)] (Schwartz et al. 2003 (link)).
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Publication 2010
Arsenic Biopharmaceuticals BLOOD Brominated Diphenyl Ethers Cadmium Cotinine Creatinine Dibenzofurans, Polychlorinated Dioxins Environmental Pollutants Furans Hydrocarbons Insecticides Iodine Lipids Mercury Metals, Heavy Organophosphates perchlorate Pesticides Phenols phthalate Polychlorinated Biphenyls Polychlorinated Dibenzodioxins Polychlorodibenzo-4-dioxin Serum Urine Volatile Organic Compounds
The method used to perform the human exposure assessment is described in the strategy in Annex A.1 of this Scientific Opinion.
The CONTAM Panel considered that only chronic dietary exposure had to be assessed. As suggested by the EFSA Working Group on Food Consumption and Exposure (EFSA, 2011a), dietary surveys with only one day per subject were excluded from the current assessment because they are not adequate to assess repeated exposure. Similarly, subjects who participated only 1 day in the dietary studies, when the protocol prescribed more reporting days per individual, were also excluded from the chronic exposure assessment. When, for one particular country and age class, two different dietary surveys were available only the most recent one was used.
For calculating the chronic dietary exposure, food consumption and body weight data at the individual level were accessed in the Comprehensive Database. Occurrence data and consumption data were linked at the relevant FoodEx level (see also Section 3.2.1). For each individual of the selected surveys, the mean occurrence values of the different food samples collected (pooled European occurrence data) were combined with the average daily consumption of the corresponding food items, and the resulting exposures per food were summed in order to obtain the total chronic exposure at individual level (divided by the respective individual body weight). The mean and the 95th percentile of the individual exposures were subsequently calculated for each dietary survey and each age class separately. All analyses were performed using the SAS Statistical Software (SAS enterprise guide 5.1).
It is well‐known that fish from certain areas may contain relatively high levels of PCDD/Fs and DL‐PCBs. This applies not only to eel from contaminated rivers and lakes, but also to various fatty fish species from, e.g. the Baltic Sea. When included in the occurrence data this may result in an overestimation of the exposure from such fish in areas where they are not consumed, and vice versa. Fish from, e.g. the Baltic Sea should be monitored to a higher extent and as such there may be a bias towards relatively high levels in the data submitted to EFSA. However, when compliant with the MLs (including measurement certainty), this fish can be put on the EU market and as such it seems not correct to exclude them from the database. It is known that in the EU, the large majority of the salmon and trout on the market is farmed, and it is widely consumed.18 In order to investigate the impact of excluding wild salmon and trout from the data set, exposure was calculated including and excluding wild salmon and trout (see Section 3.5.1).
For matching the occurrence and the consumption data, occurrence data from samples of solid tea and herbs for infusions, and infant formulae were converted to the corresponding beverages by applying specific factors (75 and 8, respectively) which are commonly used in other similar EFSA opinions.
To perform the exposure assessment, the occurrence data that are expressed on a fat weight basis, were combined with the fat per cent of the consumed foods as it is reported in the national consumption surveys in the Comprehensive Database. Fat contents available in the Comprehensive Database are included according to the national composition tables of Member States. Where the fat content was missing in the consumption database, the random hot‐deck imputation method was used to complete this information. This technique consists of replacing the missing value with an observed one, which is randomly drawn from values corresponding to samples sharing ‘similar’ characteristics. In the case of fat content, the ‘similar’ characteristic was defined by the kind of food or food group, according to the different levels of hierarchy of the FoodEx1 catalogue.
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Publication 2018
Beverages Diet Dietary Exposure Europeans Fishes Food Homo sapiens Infant Formula Polychlorinated Biphenyls Polychlorodibenzo-4-dioxin Rivers Salmo salar Trout

Most recents protocols related to «Polychlorodibenzo-4-dioxin»

The contents of target compounds in the soil samples were determined by the isotope dilution method. The detection limits for PCBs, PCNs, and PCDD/Fs were 0.11–0.79, 0.03–0.20, and 0.24–0.61 pg/g, respectively. The recovery ranges for 13C-labelled PCBs, PCNs, and PCDD/Fs were 49–80%, 51–82%, and 47–104%, respectively, which met the requirements for the determination of trace organic pollutants in environmental media [13 ,14 ]. A blank sample was analyzed for each batch of six to seven soil samples and treated in the same way as the soil samples. In the blank samples, some PCB and PCN congeners with low levels of chlorination were detected, but their contents were all less than 5% of those in the samples. Therefore, the soil samples were not blank corrected.
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Publication 2023
Chlorination Environmental Pollutants Polychlorodibenzo-4-dioxin Radioisotope Dilution Technique
The industrial park is located on the north bank of the Yellow River in Ningxia Province. There are mountains behind the park, and the prevailing wind is from the northwest to the southeast. The industrial park was established in 2003 and covers an area of approximately 40 km2. Because of the ready availability of electricity, land resources, and a dry climate suitable for electrolytic manganese production, a large electrolytic manganese production base was built in the industrial park. As mentioned above, an iron and steel smelter, a cement kiln, and a power plant were also built in the industrial park. Because the local area is rich in agricultural straw as a resource, it is used as fuel for power plants in the industrial park. In addition, chemical fertilizer plants, agricultural product processing plants, sulfuric acid plants, and new material manufacturing plants have also been built in the industrial park. To investigate the concentrations of PCBs, PCNs, and PCDD/Fs in the soil around the industrial park, 13 soil samples (P1–P13) were collected in June 2017 (Figure 1). For each sample, surface soil (0–10 cm depth) was collected with a clean stainless steel shovel, placed in a clean opaque bag, and the bag was then sealed. After collection, samples were transferred to the laboratory as soon as possible and stored in a refrigerator at −18 °C.
Sample P4 was collected near the iron and steel smelter, and samples P5, P6, P11, and P12 were collected downwind of the smelter. Samples P7 to P10 were collected downwind from the cement kiln, and close to the iron and steel smelter and biomass power plant. Samples P1, P2, and P3 were collected upwind of the iron and steel smelter, and distant from the biomass power plant and cement kiln. Samples P1, P2, and P8 were collected from the landscaped green area in the industrial park. The land used in the industrial park was mainly obtained by pushing mounds to fill gullies, so the soil of the landscaped green area in the industrial park was derived from the new soil excavated during the construction of the industrial park. All other samples were collected from the surrounding farmland. Corn was the main crop planted in the local area. A background soil sample (P14) was collected from farmland located 25 km away from the industrial park, where corn was also the main crop. Moreover, it was distant from any potential dioxin sources.
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Publication 2023
Climate Crop, Avian Dental Cementum Electricity Electrolytes Iron Maize Manganese Polychlorinated Biphenyls Polychlorodibenzo-4-dioxin Rivers Stainless Steel Steel Sulfuric Acids Tetrachlorodibenzodioxin Wind
Correlation analysis was performed using SPSS 13.0 for Windows. The positive matrix factorization model (PMF 5.0) was used to identify possible sources of PCBs, PCNs, and PCDD/Fs in the soil around the industrial park [15 ]. The congener concentrations of PCBs, PCNs, and PCDD/Fs in 13 soil samples were treated as the input data matrix. Detailed information on PMF can be found in the Supplementary Materials, such as the determination of the number of factors and some of the outputs from the PMF. The carcinogenic risk (CR) and non-carcinogenic risk (no-CR) associated with exposure to PCBs, PCNs, and PCDD/Fs in soil was assessed using the model in the risk-assessment guidelines for the US EPA Superfund [16 ,17 ]. The calculation formulas and relevant parameters can be found in the Supplementary Materials.
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Publication 2023
Carcinogens Diet, Formula Health Risk Assessment Polychlorinated Biphenyls Polychlorodibenzo-4-dioxin

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Publication 2023
Acetone Charcoal, Activated Chromatography Desiccation Filtration Gas Chromatography-Mass Spectrometry Methylene Chloride Oxide, Aluminum Polychlorodibenzo-4-dioxin Polytetrafluoroethylene Radioisotope Dilution Technique Silicon Dioxide sodium sulfate

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Publication 2023
Acetaminophen Acetone acetonitrile Amoxicillin Trihydrate Buffers Charcoal, Activated Chromatography Dexamethasone High-Performance Liquid Chromatographies Medical Devices Methylene Chloride Molecular Structure n-hexane Oxide, Aluminum Pharmaceutical Preparations Phosphates Polychlorodibenzo-4-dioxin Sertraline Hydrochloride Silicon Dioxide sodium sulfate Sulfuric Acids Syringes Toluene

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