To determine the reproducibility of the volumetric MRI analysis in tumor bearing mice, one observer (ED) applied the method to the tumors of 10 randomly selected mice on three different days. We obtained mouse MRIs at age of 4, 6, 8 10 and 12 months for a natural history study; at age of 6, 7 and 9 months for the RAD001 treatment groups; and at age 5, 7, 9 and 11 months for the Sorafenib treatment groups. On the above described 3D RARE sequence, the plexiform neurofibromas appear bright in contrast to most other tissues. Medx software (Medical Numerics, Inc., Germantown, MD) was used for volumetric analysis. One observer (ED) manually outlined lesions on each MRI slice containing tumor. Tumor on the left and right side of each mouse was measured separately at the cervical and thoracic levels, where the bulk of tumor was identified. Smaller cauda equine tumors were not included in the analysis, as the resolution in this region limited accuracy. Measurement error increases for tumors with volumes <10mm3, therefore, we report only tumors with volumes >10mm3. The tumor criteria were based on image resolution and MRI section slice thickness similar to those described previously [3 (link)]. The program calculated tumor volume from the area of graphic outline and MRI slice thickness. All volumes are reported as combined tumor volume in an individual mouse.
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RAD 001
RAD 001
RAD 001 is a pharmaceutical agent used in cancer treatment and immunosuppression.
It is an mTOR inhibitor that blocks cell growth and proliferation.
PubCompare.ai's AI-driven platform can help optimize your RAD 001 research by easily identifying the most effective protocols from literature, preprints, and patents.
Their advanced analysis compares protocols to help you make more informed decisions and streamline your workflow.
With PubCompare.ai, you can find the best approaches for your RAD 001studies.
It is an mTOR inhibitor that blocks cell growth and proliferation.
PubCompare.ai's AI-driven platform can help optimize your RAD 001 research by easily identifying the most effective protocols from literature, preprints, and patents.
Their advanced analysis compares protocols to help you make more informed decisions and streamline your workflow.
With PubCompare.ai, you can find the best approaches for your RAD 001studies.
Most cited protocols related to «RAD 001»
Dietary Fiber
Equus caballus
Mus
Neck
Neoplasms
Plexiform Neurofibroma
RAD 001
Sorafenib
Tail
Tissues
Animals
BDA-366
Cells
Heterografts
Inhalation
Institutional Animal Care and Use Committees
Lung Cancer
Males
Mice, Nude
Mus
Neoplasms
pathogenesis
RAD 001
Subcutaneous Tissue
Tissues
IHC analysis staining was performed as previously described 23 (link). Antibodies against ITGA5 (diluted 1:50), EFNB2 (diluted 1:200), p-S6 (diluted 1:75), Ki-67 (diluted 1:100) and CD31 (diluted 1:100) were used. A modified histologic score (H-scores, [{% of weak staining} × 1] + [{% of moderate staining} × 2] + [{% of strong staining} × 3]) was used to evaluate IHC staining 24 (link), 25 (link). Each staining obtained an H-score between 0 and 300, and the average of H-score for all the cases was calculated.
For IF assays, Cells were treated with DMSO, Rapa (20 nM), RAD001 (50 nM) or MHY1485 (10 µM) for 24 h and then stained as previously described 23 (link). Primary antibodies against ITGA5 (diluted 1:50), EFNB2 (diluted 1:200), or CD44 (diluted 1:1000) and FITC-conjugated secondary antibody (diluted 1:1000) were used. DAPI (Beyotime) was used to stain nuclei. The images were captured by LSM880 + Airyscan confocal laser scanning microscope (Carl Zeiss, Oberkochen, Germany).
For IF assays, Cells were treated with DMSO, Rapa (20 nM), RAD001 (50 nM) or MHY1485 (10 µM) for 24 h and then stained as previously described 23 (link). Primary antibodies against ITGA5 (diluted 1:50), EFNB2 (diluted 1:200), or CD44 (diluted 1:1000) and FITC-conjugated secondary antibody (diluted 1:1000) were used. DAPI (Beyotime) was used to stain nuclei. The images were captured by LSM880 + Airyscan confocal laser scanning microscope (Carl Zeiss, Oberkochen, Germany).
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Antibodies
Biological Assay
CD44 protein, human
Cell Nucleus
Cells
DAPI
Debility
Fluorescein-5-isothiocyanate
Immunoglobulins
ITGA5 protein, human
MHY1485
Microscopy, Confocal
RAD 001
Stains
Sulfoxide, Dimethyl
All experiments were performed in accordance with Swiss Animal Protection Laws. For tumor implantation, 5 × 106 of A431/CCKBR cells in 0.1 mL of phosphate-buffered saline (PBS) containing 0.9% NaCl were injected subcutaneously (two tumors per animal) into CD-1 female nude mice (Charles Rivers, Germany) anesthetized by isoflurane/oxygen inhalation. After 5 days, the animals were randomly distributed into experimental groups and the tumor size was measured non-invasively with a caliper and the average tumor volumes were estimated for each group. RAD001 (3 mg/kg), metformin (200 mg/kg) or PBS (control) were administered daily via intraperitoneal injection. RAD001 and metformin doses were selected based on the previous animal studies, which show anti-tumor activity and no toxicity in the nude mice 26 (link), 27 (link). In the biodistribution study, mice received 3 pmol of radiolabeled [177Lu]Lu-PP-F11N into the tail vein (150 kBq in 0.1 mL PBS), for blocking 60 nmol minigastrin was co-injected and 4 h later the mice were subjected to euthanasia with CO2. Dissected tumors and organs were weighed and measured using the gamma counter.
For SPECT/CT imaging, [177Lu]Lu-PP-F11N was purified by HPLC and 0.2 nmol of radiolabeled [177Lu]Lu-PP-F11N was diluted in PBS (10 MBq in 100 µl). Two hours after i.v. injection, mice were sacrificed and subjected to 10 min X-ray computed tomography (CT) followed by 5 h single-photon emission computed tomography (SPECT) using a multipinhole small-animal NanoSPECT/CT camera (Mediso Medical Imaging Systems). Image reconstruction and quantification was accomplished by using connecting thresholding and Otsu method (VivoQuant 3.0 Patch1).
For SPECT/CT imaging, [177Lu]Lu-PP-F11N was purified by HPLC and 0.2 nmol of radiolabeled [177Lu]Lu-PP-F11N was diluted in PBS (10 MBq in 100 µl). Two hours after i.v. injection, mice were sacrificed and subjected to 10 min X-ray computed tomography (CT) followed by 5 h single-photon emission computed tomography (SPECT) using a multipinhole small-animal NanoSPECT/CT camera (Mediso Medical Imaging Systems). Image reconstruction and quantification was accomplished by using connecting thresholding and Otsu method (VivoQuant 3.0 Patch1).
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Animals
Cells
Euthanasia
Gamma Rays
High-Performance Liquid Chromatographies
Inhalation
Injections, Intraperitoneal
Isoflurane
Lutetium-177
Metformin
Mice, Nude
minigastrin
Mus
Neoplasms
Normal Saline
Ovum Implantation
Oxygen
Phosphates
RAD 001
Rivers
Saline Solution
Single Photon Emission Computed Tomography Computed Tomography
Tail
Tomography, Emission-Computed, Single-Photon
Tomography, X-Ray
Veins
Woman
X-Ray Computed Tomography
Administration, Oral
Animals
CCI 779
Heterografts
Malignant Peripheral Nerve Sheath Tumor
Mus
Neoplasms
Neurofibroma
RAD 001
Sorafenib
Transients
Tube Feeding
Most recents protocols related to «RAD 001»
EVL (RAD001, 99.69%) was obtained from Selleck Chemicals LLC (TX, USA). ITC and AMB were from Macklin (Shanghai, China). VRC and POS were from Solarbio Biotechnology (Beijing, China). RPMI-1640 was from Gen-view Scientific Inc. (FL, USA). All reagents were prepared as per Clinical and Laboratory Standards Institute M38-A2 guidelines (CLSI, 2008).
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Clinical Laboratory Services
RAD 001
Fibroblast cultures were grown to ∼70 to 80% confluence in 10-cm dishes or 6-well plates and were serum starved for 12 h. During pharmacological inhibition experiments, inhibitors were added at the 11th h of starvation. After starvation, cells were refed with fresh media. Inhibitors were present during refeeding in the respective experiments. Inhibitors were used at the following concentrations: BKM120 (2 μM), AZD5363 (1 μM), RAD001 (40 nM), FR180204 (100 μM), U0126 (25 μM), PD980595 (50 μM), Torin-1 (40 nM), sapanisertib (125 nM), and Rapalink-1 (10 nM). Media were removed, and cells were washed in PBS and scraped on ice with ice-cold lysis buffer [1% digitonin, 150 mM NaCl, 50 mM Tris (pH 7.4), 10 mM NaF, 2 mM sodium orthovanadate, protease inhibitor cocktail (Sigma-Aldrich), and phosphatase inhibitor cocktail (Sigma-Aldrich)] and transferred to a centrifuge tube. After 15 min of incubation on ice, samples were centrifuged at high speed for 15 min to remove nuclei and debris. The protein concentration of the lysate was determined with a Pierce BCA assay (Thermo Fisher).
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AZD5363
Biological Assay
Buffers
Cell Nucleus
Cells
Cold Temperature
Digitonin
Fibroblasts
FR 180204
Hyperostosis, Diffuse Idiopathic Skeletal
inhibitors
NVP-BKM120
Orthovanadate
Phosphoric Monoester Hydrolases
Protease Inhibitors
Proteins
Psychological Inhibition
RAD 001
RapaLink-1
sapanisertib
Serum
Sodium
Sodium Chloride
torin
Tromethamine
U 0126
The following antibodies for the purpose of Western blotting were acquired from Cell Signaling Technologies: pAKT S473 (Catalog number 4060), PAN-AKT (#2920), Phospho-p44/42 MAPK (#4370), p44/42 MAPK (#4695), S6 Ribosomal Protein (#2317), Phospho-S6 Ribosomal Protein (#4858), Phospho-p70S6 Kinase Thr389 (#97596), p70S6 Kinase (#9202), Phospho-4EBP1 Thr37/46 (#2855), 4EBP1 (#9452). Antibodies against Beta-Actin were purchased from GeneTex (catalog number 109639). MAPK inhibitors were purchased from Tocris: FR180204 (catalog number 3706), U0126 (catalog number 1144), PD980595 (catalog number 1213). Sapanisertib (Cat# HY-13328) and Rapalink-1 (Cat# HY-111373) were purchased from MedChemExpress. Torin-1 (Cat #4247) was purchased from Tocris. PI3K/AKT/mTOR inhibitors BKM120 (Buparlisib; Novartis), AZD5363 (Capivasertib; Selleckchem), and RAD001 (Everolimus, MedChemExpress Cat# 159351–69–6) were generously provided by Dr Kathleen Millen.
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Antibodies
AZD5363
beta-Actin
buparlisib
capivasertib
EIF4EBP1 protein, human
Everolimus
FR 180204
FRAP1 protein, human
inhibitors
Mitogen-Activated Protein Kinase 3
NVP-BKM120
RAD 001
RapaLink-1
Ribosomal Proteins
Ribosomal Protein S6 Kinases, 70-kDa
sapanisertib
torin
U 0126
CAMA-1 (ATCC HTB-21) and MCF7 (ATCC HTB-22) human BC cell lines were maintained in Dulbecco's Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum (FBS, Sigma-Aldrich #12306C) and antibiotic–antimycotic solution. T47D (ATCC HTB-133) human BC cell line was maintained in RPMI supplemented with 10% FBS and antibiotic–antimycotic solution. Cells were regularly tested for mycoplasma contamination using commercially available Mycoplasma detection kit (Myco Alert kit, Lonza). Cell lines were authenticated using STR profiling (Laragen, Inc). Everolimus (RAD001, #S1120) and ONC201/TIC10 (#S7963) were obtained from Selleckchem and dissolved in DMSO.
Everolimus resistant cell lines were generated by long-term culture of parental cell lines in the continuous presence of 100 nM everolimus (MCF7 and T47D) or 50 nM everolimus (CAMA-1) with fresh media and drug replenished every 3 days, until resistance developed (6–12 months). Resistance to everolimus was confirmed by the difference in the drug dose–response in comparison with the parental cells, measured using CellTiter-Glo Luminescent Cell Viability Assay (Promega Corporation #G7573). Everolimus resistant cells were further maintained in complete culture medium supplemented with 50 nM everolimus (CAMA-1) or 100 nM everolimus (MCF7 and T47D). Sensitive and resistant cells were labeled with Venus (LeGO-V2 Addgene #27340) and mCherry (LeGO-C2 Addgene #27339) fluorescent proteins, respectively, as described previously (Grolmusz et al., 2020 (link); Weber et al., 2008 (link)).
Everolimus resistant cell lines were generated by long-term culture of parental cell lines in the continuous presence of 100 nM everolimus (MCF7 and T47D) or 50 nM everolimus (CAMA-1) with fresh media and drug replenished every 3 days, until resistance developed (6–12 months). Resistance to everolimus was confirmed by the difference in the drug dose–response in comparison with the parental cells, measured using CellTiter-Glo Luminescent Cell Viability Assay (Promega Corporation #G7573). Everolimus resistant cells were further maintained in complete culture medium supplemented with 50 nM everolimus (CAMA-1) or 100 nM everolimus (MCF7 and T47D). Sensitive and resistant cells were labeled with Venus (LeGO-V2 Addgene #27340) and mCherry (LeGO-C2 Addgene #27339) fluorescent proteins, respectively, as described previously (Grolmusz et al., 2020 (link); Weber et al., 2008 (link)).
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Antibiotics
Camassia
Cell Lines
Cells
Cell Survival
Culture Media
Eagle
Everolimus
Homo sapiens
Luminescent Measurements
MCF-7 Cells
Mycoplasma
ONC201
Parent
Pharmaceutical Preparations
Promega
Proteins
RAD 001
Sulfoxide, Dimethyl
TIC10 compound
JR-AB2-011 (MCE HY-122022), everolimus (MCE RAD001), and rapamycin (MCE HY-10219) were dissolved in dimethyl sulfoxide at a stock concentration of 10 mM and then frozen in aliquots at −80°C. The cells were incubated with the specified concentration of inhibitor for 2 hours and then infected with TGEV at an MOI of 0.01. Then, the cells were prepared for immunofluorescence assays at 24 hpi, and the supernatants were collected for viral titer assays.
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Biological Assay
Cells
Everolimus
Freezing
Immunofluorescence
RAD 001
Sirolimus
Sulfoxide, Dimethyl
Top products related to «RAD 001»
Sourced in United States, China
RAD001 is a laboratory equipment used for analyzing and measuring various chemical and biological samples. It is designed to provide accurate and precise measurements of specific parameters within the samples. The core function of RAD001 is to perform analytical tasks, but a more detailed description cannot be provided while maintaining an unbiased and factual approach.
Sourced in Switzerland, United States
RAD001 is a laboratory instrument designed for research and analysis. It provides a platform for various scientific applications. The core function of RAD001 is to facilitate data collection and processing in a controlled environment.
Sourced in United States, China, United Kingdom, Germany
MK-2206 is a selective allosteric Akt inhibitor that binds to the pleckstrin homology (PH) domain of Akt and inhibits its phosphorylation and activation. It has been used in research applications to study the role of Akt signaling in various cellular processes.
Sourced in United States, Australia
Everolimus (RAD001) is a mTOR inhibitor, a class of immunosuppressant drugs. It functions by blocking the mammalian target of rapamycin (mTOR), a protein kinase that regulates cell growth, proliferation, and survival. Everolimus is used in research applications to study cellular pathways and signaling mechanisms.
Sourced in United States, China, United Kingdom, Germany, Australia, Japan, Canada, Italy, France, Switzerland, New Zealand, Brazil, Belgium, India, Spain, Israel, Austria, Poland, Ireland, Sweden, Macao, Netherlands, Denmark, Cameroon, Singapore, Portugal, Argentina, Holy See (Vatican City State), Morocco, Uruguay, Mexico, Thailand, Sao Tome and Principe, Hungary, Panama, Hong Kong, Norway, United Arab Emirates, Czechia, Russian Federation, Chile, Moldova, Republic of, Gabon, Palestine, State of, Saudi Arabia, Senegal
Fetal Bovine Serum (FBS) is a cell culture supplement derived from the blood of bovine fetuses. FBS provides a source of proteins, growth factors, and other components that support the growth and maintenance of various cell types in in vitro cell culture applications.
Sourced in United States, Germany, United Kingdom, China, Italy, Sao Tome and Principe, France, Macao, India, Canada, Switzerland, Japan, Australia, Spain, Poland, Belgium, Brazil, Czechia, Portugal, Austria, Denmark, Israel, Sweden, Ireland, Hungary, Mexico, Netherlands, Singapore, Indonesia, Slovakia, Cameroon, Norway, Thailand, Chile, Finland, Malaysia, Latvia, New Zealand, Hong Kong, Pakistan, Uruguay, Bangladesh
DMSO is a versatile organic solvent commonly used in laboratory settings. It has a high boiling point, low viscosity, and the ability to dissolve a wide range of polar and non-polar compounds. DMSO's core function is as a solvent, allowing for the effective dissolution and handling of various chemical substances during research and experimentation.
Sourced in United States
RAD001 is a laboratory equipment product manufactured by LC Laboratories. It is a versatile instrument designed for scientific research and experimentation. The core function of RAD001 is to perform precise measurements and analyses of various samples and materials.
Sourced in United States, United Kingdom, Germany, China, Canada, Japan, Italy, France, Belgium, Australia, Uruguay, Switzerland, Israel, India, Spain, Denmark, Morocco, Austria, Brazil, Ireland, Netherlands, Montenegro, Poland
Matrigel is a solubilized basement membrane preparation extracted from the Engelbreth-Holm-Swarm (EHS) mouse sarcoma, a tumor rich in extracellular matrix proteins. It is widely used as a substrate for the in vitro cultivation of cells, particularly those that require a more physiologically relevant microenvironment for growth and differentiation.
Sourced in Switzerland, United States
BKM120 is a laboratory research tool produced by Novartis. It is a small molecule inhibitor that targets the phosphoinositide 3-kinase (PI3K) signaling pathway. The core function of BKM120 is to serve as a research instrument for studying cellular processes and signaling mechanisms involving the PI3K pathway.
Sourced in United States, Germany, United Kingdom, Canada, Morocco, Macao
Rapamycin is a macrolide compound produced by the bacterium Streptomyces hygroscopicus. It functions as an immunosuppressant and has been used in research applications.
More about "RAD 001"
Rad 001, also known as Everolimus, is a potent mTOR inhibitor that has been extensively studied for its anti-cancer and immunosuppressive properties.
This pharmaceutical agent is commonly used in the treatment of various types of cancers, including renal cell carcinoma, breast cancer, and neuroendocrine tumors.
Rad 001 works by blocking the mammalian target of rapamycin (mTOR) pathway, which is a crucial regulator of cell growth, proliferation, and survival.
Rad 001 has been shown to be effective in inhibiting the growth and proliferation of cancer cells, making it a valuable tool in cancer research and treatment.
In addition to its anti-cancer effects, Rad 001 has also been used in the field of immunosuppression, particularly in the context of organ transplantation, where it helps to prevent rejection of the transplanted organ.
To further optimize Rad 001 research, researchers can utilize the AI-driven platform offered by PubCompare.ai.
This platform enables researchers to easily identify the most effective protocols from the literature, preprints, and patents, by comparing and analyzing the available data.
The advanced AI-powered analysis provided by PubCompare.ai can help researchers make more informed decisions and streamline their workflow, ultimately leading to more efficient and productive Rad 001 studies.
When working with Rad 001, researchers may also encounter other related compounds and reagents, such as MK-2206, an Akt inhibitor, and Everolimus, which is a derivative of Rad 001.
Additionally, cell culture techniques involving the use of fetal bovine serum (FBS), dimethyl sulfoxide (DMSO), and Matrigel may be employed.
Researchers may also explore the use of BKM120, a PI3K inhibitor, and Rapamycin, another mTOR inhibitor, in combination with Rad 001 to enhance its efficacy.
By leveraging the insights and tools provided by PubCompare.ai, researchers can optimize their Rad 001 studies and uncover the most effective protocols, leading to advancements in cancer treatment and immunosuppression research.
This pharmaceutical agent is commonly used in the treatment of various types of cancers, including renal cell carcinoma, breast cancer, and neuroendocrine tumors.
Rad 001 works by blocking the mammalian target of rapamycin (mTOR) pathway, which is a crucial regulator of cell growth, proliferation, and survival.
Rad 001 has been shown to be effective in inhibiting the growth and proliferation of cancer cells, making it a valuable tool in cancer research and treatment.
In addition to its anti-cancer effects, Rad 001 has also been used in the field of immunosuppression, particularly in the context of organ transplantation, where it helps to prevent rejection of the transplanted organ.
To further optimize Rad 001 research, researchers can utilize the AI-driven platform offered by PubCompare.ai.
This platform enables researchers to easily identify the most effective protocols from the literature, preprints, and patents, by comparing and analyzing the available data.
The advanced AI-powered analysis provided by PubCompare.ai can help researchers make more informed decisions and streamline their workflow, ultimately leading to more efficient and productive Rad 001 studies.
When working with Rad 001, researchers may also encounter other related compounds and reagents, such as MK-2206, an Akt inhibitor, and Everolimus, which is a derivative of Rad 001.
Additionally, cell culture techniques involving the use of fetal bovine serum (FBS), dimethyl sulfoxide (DMSO), and Matrigel may be employed.
Researchers may also explore the use of BKM120, a PI3K inhibitor, and Rapamycin, another mTOR inhibitor, in combination with Rad 001 to enhance its efficacy.
By leveraging the insights and tools provided by PubCompare.ai, researchers can optimize their Rad 001 studies and uncover the most effective protocols, leading to advancements in cancer treatment and immunosuppression research.