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Spurr resin

Spurr resin is a type of epoxy resin commonly used in electron microscopy for embedding and sectioning biological samples.
It offers excellent preservation of ultrastructural details and is known for its low viscosity, high rigidity, and ability to withstand the high-energy electron beam during imaging.
Researchers can optimize Spurr resin protocols through AI-driven comparisons of published literature, preprints, and patents using the PubCompare.ai tool, enhancing the reproducibility of their Spurr resin-based experiments.
This innovative platform enables identification of the best Spurr resin procedures and products, facilitating AI-assisted protocol analysis for researchers' next Spurr resin projects.

Most cited protocols related to «Spurr resin»

The image datasets in this study were obtained from five 8-week-old, male C57BL/6 mice with Nissl staining (Wu et al., 2014 (link)). First, the mice were anesthetized using a 1% solution of sodium pentobarbital (90 mg/kg) and perfused intracardially with 0.01M phosphate-buffered saline (PBS) and 4% paraformaldehyde at a pressure of 38 mmHg. After perfusion, the brains were removed from the skull and post-fixed. Subsequently, the brains were washed with PBS and stained with thionine solution. Then a graded series of ethanol and acetone solutions were used to dehydrate the brains. Finally, the brains were immersed in a graded series of Spurr resin solutions. The total sample preparation time was nearly 25 days. Detailed information about sample preparation can be found in our previous work (Wu et al., 2014 (link)). All the animal experiments were performed according to the procedures approved by the Institutional Animal Ethics Committee of Huazhong University of Science and Technology.
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Publication 2017
Acetone Animals Brain Cranium Ethanol Institutional Ethics Committees Males Mice, House Mice, Inbred C57BL paraform Pentobarbital Sodium Perfusion Phosphates Pressure Saline Solution spurr resin thionine
Freshly dissected chick metatarsal tendons were cut into 3-mm lengths and frozen to −196°C using an EM PACT high pressure freezer (Leica). Freeze substitution for ultrastructure was performed using an AFS system (Leica), starting at –90°C in 2% wt/vol osmium tetroxide in actone, going through pure acetone at −50°C and ending in several changes of Spurr's resin (Spurr, 1969 (link)). at 20°C. Polymerization in fresh resin was then performed at 60°C for 24 h. Freeze substitution for immunolabeling was performed using an AFS system (Leica) using pure acetone at –90°C, pure ethanol at −50°C in ethanol, and ending in several changes of HM20 Lowicryl resin at −50°C. UV polymerization in fresh resin was then performed at –50°C for 48 h and continued at 20°C for 48 h.
Embryonic mouse tails were fixed in 2% glutaraldehyde in 100 mM phosphate buffer, pH 7.0, for 30 min at RT. The tails were then diced and fixed for 2 h at 4°C in fresh fixative. After washing in 200 mM phosphate buffer they were fixed after in 1% glutaraldehyde and 1% OsO4 in 50 mM phosphate buffer, pH 6.2, for 40 min at 4°C. After a rinse in distilled water they were en bloc stained with 1% aqueous uranyl acetate for 16 h at 4°C, dehydrated and embedded in Spurrs' resin.
Ultra-thin sections for normal transmission electron microscopy were collected on uncoated copper 200 grids, serial sections for 3-D reconstruction on formvar-coated copper 1,000 μm slot grids (stabilized with carbon film) and ultra-thin sections (∼60 nm) for immunolabeling on formvar-coated nickel 400 grids. A postembedding labeling technique was used to detect type I collagen using a rabbit anti–chicken collagen-I antibody (Biodesign International) at a dilution of 1:500 followed by a gold-conjugated goat anti–rabbit antibody (British Biocell International) at a dilution of 1:200. All sections were subsequently stained with uranyl acetate and lead citrate, and examined using either a JEOL 1200EX, Philips EM 400, or Philips BioTwin transmission electron microscope. Images were recorded on 4489 film (Kodak) and scanned using an Imacon Flextight 848 scanner (Precision Camera & Video). Images from EM serial sections were aligned and reconstructed in IMOD for Linux (Kremer et al., 1996 (link)) and visualized using OpenSynu for Linux (Hessler et al., 1992 (link)).
Publication 2004
Acetone Antibodies, Anti-Idiotypic Buffers Carbon Chickens Citrates Collagen Type I Copper Embryo Ethanol Fixatives Formvar Freeze Substitution Freezing Glutaral Goat Gold IMod Metatarsal Bones Mice, House Microtomy Nickel Osmium Tetroxide Phosphates Polymerization Pressure Rabbits Reconstructive Surgical Procedures Resins, Plant spurr resin Tail Technique, Dilution Tendons Transmission Electron Microscopy uranyl acetate

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Publication 2004
Yeast cells were grown overnight to early log phase (OD600=0.3–0.6) at 25°C. Approximately 10 OD600 units of cells were harvested using a 0.22 μm filter apparatus, washed with 10 ml of 0.1 M cacodylate (pH 6.8), resuspended in 10 ml of fixative (0.1 M cacodylate, 4% glutaraldehyde, pH 6.8) and incubated for 1 hr at room temperature before the cells were stored overnight at 4°C. The next day, the fixed cells were washed with 50 mM KPi (pH 7.5) and then incubated at 37°C for 40 min with buffer containing Zymolase 100T (0.25 mg/ml). After the incubation, the cells were washed with ice cold 0.1 M cacodylate buffer, incubated in 2% OsO4 for 1 hr on ice, washed with water and then incubated in 2% uranyl acetate (UrAc) for 1 hr at room temperature. Samples were dehydrated using a series of ethanol washes, and incubated overnight in Spurr resin. Samples were embedded in fresh Spurr resin, and baked at 80°C for at least 24 hr. Sections were stained with lead citrate and UrAc and images were acquired using a Tecnai G2 Spirit transmission electron microscope equipped with a Gatan Ultra Scan 4000 CCD camera.
Publication 2012
Buffers Cacodylate Cells Citrates Cold Temperature Ethanol Fixatives Glucan Endo-1,3-beta-D-Glucosidase Glutaral Radionuclide Imaging spurr resin Transmission Electron Microscopy uranyl acetate Yeast, Dried
Yeast cells were grown overnight to early log phase (OD600=0.3–0.6) at 25°C. Approximately 10 OD600 units of cells were harvested using a 0.22 μm filter apparatus, washed with 10 ml of 0.1 M cacodylate (pH 6.8), resuspended in 10 ml of fixative (0.1 M cacodylate, 4% glutaraldehyde, pH 6.8) and incubated for 1 hr at room temperature before the cells were stored overnight at 4°C. The next day, the fixed cells were washed with 50 mM KPi (pH 7.5) and then incubated at 37°C for 40 min with buffer containing Zymolase 100T (0.25 mg/ml). After the incubation, the cells were washed with ice cold 0.1 M cacodylate buffer, incubated in 2% OsO4 for 1 hr on ice, washed with water and then incubated in 2% uranyl acetate (UrAc) for 1 hr at room temperature. Samples were dehydrated using a series of ethanol washes, and incubated overnight in Spurr resin. Samples were embedded in fresh Spurr resin, and baked at 80°C for at least 24 hr. Sections were stained with lead citrate and UrAc and images were acquired using a Tecnai G2 Spirit transmission electron microscope equipped with a Gatan Ultra Scan 4000 CCD camera.
Publication 2012
Buffers Cacodylate Cells Citrates Cold Temperature Ethanol Fixatives Glucan Endo-1,3-beta-D-Glucosidase Glutaral Radionuclide Imaging spurr resin Transmission Electron Microscopy uranyl acetate Yeast, Dried

Most recents protocols related to «Spurr resin»

Samples were fixed overnight in a solution of 2.5% glutaraldehyde and 2% PFA in 0.1 M phosphate buffer (pH 7.2-7.4). Samples were washed of fixative 3 times with 0.1 M phosphate buffer for 15 minutes, before being incubated for 1 hour in 1% Osmium Tetroxide, followed by 3 more 15-minute phosphate buffer washes. Samples were then dehydrated via sequential 25-minute washes in 50%, 70%, and 90% ethanol, and 3 washes in 100% ethanol. Spurr Resin was introduced via wash in 1:1 mixture of 100% ethanol and Spurr resin, followed by an overnight wash in pure Spurr resin. Spurr resin was replaced twice the following day before samples were placed in block molds and embedded in fresh Spurr and cured in a 70°C oven overnight. Excess resin was then trimmed away with razor blades to expose embedded tissues for ultrathin sectioning on an Ultracut E ultramicrotome (Reichert-Jung). Sections were placed on a copper grid and treated with uranyl acetate for 20 minutes before being rinsed and treated with lead citrate for 7 minutes and rinsed. Stained sections were imaged using a Phillips FEI Morgagni 268 Transmission Electron Microscope, operating at 80 kV. Images were captured with a Gatan Orius CCD camera.
Publication 2024
The cell lines were washed with PBS and fixed in 2.5% glutaraldehyde in phosphate buffer (0.1 M, pH 7.0) for 4 h and post-fixed with 1% OsO4 in phosphate buffer (0.1 M, pH 7.0) for 2 h. The samples were dehydrated with increasing concentrations of ethanol (30, 50, 70, 80, 90, 95 and 100) and transferred to absolute acetone for 20 min. After placing in 1:1 mixture of absolute acetone and the final Spurr resin (SPI-CHEM, 02690-AB) mixture for 1 h at room temperature, the samples were transferred to 1:3 mixture of absolute acetone and the final resin mixture for 3 h and to final Spurr resin mixture for overnight. Electron photomicrographs were taken from ultrastructures of cells under a transmission electron microscopy (Hitachi, H-7650).
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Publication 2024

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Publication 2024
The hCMEC/D3 cells and the T98G cells were seeded in 6-well plates at a density of 3,5 x 104 cells per well. Once they reached confluence, these cells were stimulated with or without 20 ng/mL of IL-1β (Cat. #579404, Biolegend) for three hours at 37°C in 5% CO2. After the stimulation period, the NPS conjugated with P88 (1 mM) diluted in the culture medium, were added to the cell wells and incubated for three hours at 37°C in 5% CO2. Following the incubation time, the cells were washed three times with PBS and were trypsinized and centrifuged at 1200 rpm for 10 minutes. Then, the pellet was diluted in glutaraldehyde 2.5%. Once the cells were fixed, they were centrifuged at 13,000 rpm for 3 minutes. Subsequently, a post-fixation process was carried out using 1% osmium tetroxide in water for two hours at 4°C, followed by a pre-imbibition step with 3% uranyl acetate for 1 hour at room temperature. The dehydration process involved a series of ethanol gradients at different concentrations: 50%, 70%, 90%, 100%, 100%, each lasting 10 minutes. This was followed by acetone-ethanol (1:1) for 15 minutes and then acetone for another 15 minutes. For the SPURRs epoxy resin, the following procedure was followed: Mix Resin Spurr with acetone (2:1) for 1 hour, Mix Resin Spurr with acetone (1:1) for 1 hour, Pure Resin Spurr for 2 hours, and polymerize for 12 hours at 72°C. The samples were sectioned using a Leica EM UC7 ultramicrotome, creating slices with a thickness of 130 nm. These slices were contrasted with 6% uranyl acetate and lead citrate. Finally, the samples were observed using a JEOL 1400 plus TEM, and images were captured using a Gatan Orius CCD camera.
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Publication 2024
Cells were cultured in a six-well plate and then fixed with 2.5% glutaraldehyde in PBS at 4°C for 4 hours. Following this, the cells were washed three times with PBS for 15 minutes each. Post-fixation was then conducted using 1% OsO4 in PBS for 1.5 hours, followed by three more washes with PBS for 15 minutes. Subsequently, a graded series of ethanol solutions (30%, 50%, 70%, and 80%) was used for dehydration for 15 minutes, followed by a graded series of acetone solutions (90% and 95%) for 15 minutes. This was followed by dehydration in absolute acetone for 20 minutes twice. The cells were then placed in a mixture of absolute acetone and the final Spurr resin in a 1:1 ratio for 1 hour at room temperature and transferred to a 1:3 mixture of absolute acetone and the final resin mixture for 2 hours. Finally, the cells were transferred to a mixture of the final Spurr resin and absolute acetone overnight. After the embedding process was completed, ultrathin sections were cut and stained, and images of the samples were obtained using a transmission electron microscope (H-7650, Hitachi, Japan).
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Publication 2024

Top products related to «Spurr resin»

Sourced in Japan, United States, Germany, United Kingdom, China, France
The Hitachi H-7650 is a transmission electron microscope (TEM) designed for high-resolution imaging of materials. It provides a core function of nanoscale imaging and analysis of a wide range of samples.
Sourced in United States, Germany
Spurr resin is a low-viscosity epoxy resin used in electron microscopy for embedding and sectioning biological samples. It provides a rigid support structure for the specimen during the sectioning process.
Sourced in United States
Spurr resin is a low-viscosity embedding resin used in electron microscopy sample preparation. It is designed to provide optimal structural preservation and sectioning properties for transmission electron microscopy (TEM) analysis.
Sourced in Germany, Austria, United States, Japan, Switzerland, China, France
The Leica EM UC7 is an ultramicrotome designed for cutting ultrathin sections of samples for transmission electron microscopy (TEM) analysis. It features a precision-engineered cutting mechanism that allows for the preparation of high-quality ultrathin sections with thicknesses ranging from 15 to 500 nanometers.
Sourced in Japan, United Kingdom, United States
The Hitachi H-7650 TEM is a transmission electron microscope designed for high-resolution imaging and analysis. It features a high-brightness electron gun and advanced optics to provide clear, detailed images of a wide range of samples.
Sourced in Germany, United States, Austria, Japan, Switzerland, United Kingdom, China
The EM UC7 ultramicrotome is a precision instrument used for cutting ultra-thin sections of biological samples or materials for examination under an electron microscope. It is designed to produce consistent and uniform sections with thicknesses ranging from 50 to 500 nanometers.
Sourced in Japan, United States, Germany, United Kingdom, France
The JEM-1230 is a transmission electron microscope (TEM) manufactured by JEOL. It is designed to provide high-quality imaging and analysis of a wide range of materials. The JEM-1230 operates at an accelerating voltage of 120 kV and offers a resolution of 0.2 nanometers.
Sourced in Japan, United States, Germany, United Kingdom, France, Spain
The JEM-1400 is a transmission electron microscope (TEM) produced by JEOL. It is designed to provide high-quality imaging and analysis of a wide range of materials at the nanoscale level. The JEM-1400 offers a maximum accelerating voltage of 120 kV and features advanced optics and detectors to enable detailed examination of samples.
Sourced in Japan
The Hitachi Model H-7650 TEM is a transmission electron microscope (TEM) designed for high-resolution imaging and analysis of materials at the nanoscale. It provides advanced electron optics and imaging capabilities for a wide range of applications in materials science, life sciences, and nanotechnology research.
Sourced in Germany, Japan
The EM UC7 ultratome is a high-precision instrument designed for the preparation of ultrathin sections for transmission electron microscopy. It features a stable and reliable cutting mechanism, allowing for the production of uniform and damage-free samples.

More about "Spurr resin"

Spurr resin, a versatile epoxy-based embedding material, has become a staple in the field of electron microscopy.
This low-viscosity, high-rigidity resin offers exceptional preservation of ultrastructural details, making it a preferred choice for embedding and sectioning biological samples.
Researchers can leverage the power of AI-driven comparisons of published literature, preprints, and patents using the PubCompare.ai tool to optimize their Spurr resin protocols, enhancing the reproducibility of their experiments.
The unique properties of Spurr resin, such as its ability to withstand the high-energy electron beam during imaging, have made it a go-to solution for researchers working with transmission electron microscopes (TEM), including the JEM-1230, JEM-1400, and Model H-7650 TEM.
Additionally, the EM UC7 ultramicrotome, a high-precision instrument, is often employed in conjunction with Spurr resin to achieve precise sectioning for optimal sample preparation.
By leveraging the insights gained from the MeSH term description and the Metadescription, researchers can delve deeper into the nuances of Spurr resin and explore innovative ways to enhance their experimental workflows.
This AI-assisted approach to protocol analysis enables the identification of the best Spurr resin procedures and products, ultimately contributing to the advancement of electron microscopy research and the understanding of complex biological structures.