The largest database of trusted experimental protocols
> Chemicals & Drugs > Vitamin > Pyridoxal Phosphate

Pyridoxal Phosphate

Pyridoxal Phosphate is a coenzyme form of vitamin B6 that plays a crucial role in numerous metabolic processes within the body.
It serves as a cofactor for various enzymes involved in the metabolism of amino acids, lipids, and carbohydrates.
Pyridoxal Phosphate is essential for the proper functioning of the nervous system, the immune system, and the development of red blood cells.
Researching the role of Pyridoxal Phosphate in health and disease can provide valuable insights into a wide range of physiological and pathological conditions.
Optimizing research protocols for reproducibilty and accuracy is crucial when investigating this important biomolecule.

Most cited protocols related to «Pyridoxal Phosphate»

Detailed methodology is included in Additional File 1. Blood samples were analyzed for complete blood counts, creatinine, albumin, plasma lipids, total carotenoids, vitamin C, folate, vitamin B12, pyridoxal-5'-phosphate, homocysteine, methylmalonic acid, C-reactive protein, glucose, insulin, glycosylated hemoglobin, blood urea nitrogen, and dehydroepiandrosterone sulfate. A 12-hour urine sample was analyzed for cortisol, creatinine, epinephrine and norepinephrine. Saliva samples were used for measurement of salivary cortisol.
Full text: Click here
Publication 2010
Albumins Ascorbic Acid BLOOD Carotenoids Cobalamins Complete Blood Count C Reactive Protein Creatinine Dehydroepiandrosterone Sulfate Epinephrine Folate Glucose Hemoglobin, Glycosylated Homocysteine Hydrocortisone Insulin Lipids Methylmalonic Acid Norepinephrine Plasma Pyridoxal Phosphate Saliva Urea Nitrogen, Blood Urine
The full-length coding sequence of GmCHX1 from W05 was cloned into the binary vector V7 (ref. 56 (link)) between XbaI and XhoI sites downstream of the constitutive Cauliflower Mosaic Virus 35S promoter. As a negative control, the gene for the GFP was cloned instead of GmCHX1 using the same vector and promoter. Both constructs were then transformed into the salt-sensitive parent C08. The soybean hairy root transformation and salt treatments were performed as previously described57 with some modifications. Surface-sterilized soybean seeds were germinated on germination medium (15 mg l−1 NaH2PO4·H2O, 1 mM CaCl2·2H2O, 25 mM KNO3, 1 mM (NH4)2SO4, 1 mM MgSO4·7H2O, 0.1 mM Na2EDTA·2H2O, 0.1 mM FeSO4·7H2O, 10 mg l−1 MnSO4·2H2O, 2 mg l−1 ZnSO4·7H2O, 3 mg l−1 H3BO3, 0.25 mg l−1 Na2MoSO4·2H2O, 0.025 mg l−1 CuSO4·5H2O, 0.025 mg l−1 CoCl2·6H2O, 0.75 mg l−1 KI, 1 × B5 vitamin (10 mg l−1 thiamine, 1 mg l−1 pyridoxal phosphate, 1 mg l−1 nicotinic acid and 100 mg l−1 myo-inositol), 2% sucrose, 0.6% agar, pH 5.8) for 4 days (16 h light/8 h dark). Agrobacterium rhizogenes strain K599 containing the recombinant constructs was grown in yeast extract peptone medium containing 50 mg l−1 kanamycin and 200 μM acetosyringone at 28 °C for 16 h. It was then used to infect the cotyledons through scalpel incisions. The cotyledons were co-cultivated with A. rhizogenes in the dark for 5 days on moist filter paper. After that, the infected cotyledons were transferred to root-inducing medium (4.3 g l−1 Murashige and Skoog (MS) medium, 1 × B5 vitamin, 3% sucrose, 250 mg l−1 cefotaxime and 50 mg l−1 kanamycin). After 2 weeks, cotyledons with roots emerging from the incision sites were transferred to new root-inducing medium with 100 mM NaCl or medium without NaCl as untreated control. Root mass was weighed about 2 weeks after treatment.
Publication 2014
acetosyringone Agar Agrobacterium rhizogenes Cauliflower Mosaic Virus Cefotaxime Cloning Vectors Cotyledon Genes Germination Hair Inositol Kanamycin Light Niacin Open Reading Frames Pantothenic Acid Parent Peptones Plant Embryos Plant Roots Pyridoxal Phosphate Sodium Chloride Soybeans Strains Sucrose Sulfate, Magnesium Thiamine Yeast, Dried
Cells were harvested as described above and were disrupted by homogenization in a ground-glass homogenizer fitted with a ground-glass pestle, using a buffer consisting of 154 mM NaCl and 10 mM sodium-potassium phosphate (pH 7.4). Aliquots were withdrawn for measurement of DNA and protein (Smith et al. 1985 (link)).
ChAT assays (Lau et al. 1988 (link)) were conducted in 60 μL of a buffer consisting of 60 mM sodium phosphate (pH 7.9), 200 mM NaCl, 20 mM choline chloride, 17 mM MgCl2, 1 mM EDTA, 0.2% Triton X-100, 0.12 mM physostigmine, and 0.6 mg/mL bovine serum albumin (Sigma Chemical Co.), containing a final concentration of 50 μM [14C]acetyl-coenzyme A (specific activity 60 mCi/mmol, diluted with unlabeled compound to 6.7 mCi/mmol; PerkinElmer Life Sciences, Boston, MA). The amount of protein used in each assay was adjusted to maintain activity within the linear range. Blanks contained homogenization buffer instead of the tissue homogenate. Samples were pre-incubated for 15 min on ice and transferred to a 37°C water bath for 30 min; the reaction was terminated by placing the samples on ice. Labeled acetylcholine was then extracted and counted in a liquid scintillation counter and the activity was calculated as nanomoles synthesized per hour per microgram DNA.
TH activity was measured using [14C]tyrosine as a substrate and trapping the evolved 14CO2 after coupled decarboxylation with dopa decarboxylase (Lau et al. 1988 (link); Waymire et al. 1971 (link)). Homogenates were sedimented at 26,000 × g for 10 min to remove storage vesicles containing catecholamines, which interfere with TH activity, and assays were conducted with 100 μL aliquots of the supernatant solution in a total volume of 550 μL. Each assay (pH 6.1) contained final concentrations of 910 μM FeSO4, 55 μM unlabeled L-tyrosine (Sigma Chemical Co.), 9.1 μM pyridoxal phosphate (Sigma Chemical Co.), 36 μM β-mercaptoethanol, and 180 μM 2-amino-6,7-dimethyl-4-hydroxy-5,6,7,8-tetrahydropteridine HCl (Sigma Chemical Co.), all in a buffer of 180 mM sodium acetate and 1.8 mM sodium phosphate (pH 6.1). Each assay contained 0.5 μCi of generally labeled [14C]tyrosine (specific activity, 438 mCi/mmol; Sigma Chemical Co.) as substrate, and blanks contained buffer in place of the homogenate. Activity was calculated on the same basis as for ChAT.
Full text: Click here
Publication 2006
2-Mercaptoethanol 5,6,7,8-tetrahydropteridine Acetylcholine Bath Biological Assay Buffers Catecholamines Cells Choline Chloride Coenzyme A, Acetyl Decarboxylation Dopa Decarboxylase Edetic Acid Magnesium Chloride Physostigmine Potassium potassium phosphate Proteins Pyridoxal Phosphate Scintillation Counters Serum Albumin, Bovine Sodium Sodium Acetate Sodium Chloride sodium phosphate Tissues Triton X-100 Tyrosine
Cells were harvested as described above and were disrupted by homogenization in a ground-glass homogenizer fitted with a ground-glass pestle, using a buffer consisting of 154 mM NaCl and 10 mM sodium-potassium phosphate (pH 7.4). An aliquot was withdrawn for measurement of protein (Smith et al. 1985 (link)).
ChAT assays (Lau et al. 1988 (link)) were conducted with 40 μg of sample protein in 60 μL of a buffer consisting of 60 mM sodium phosphate (pH 7.9), 200 mM NaCl, 20 mM choline chloride, 17 mM MgCl2, 1 mM EDTA, 0.2% Triton X-100, 0.12 mM physostigmine (Sigma), and 0.6 mg/mL bovine serum albumin (Sigma), containing a final concentration of 50 μM [14C]acetyl-coenzyme A (specific activity of 44 mCi/mmol, diluted with unlabeled compound to 6.7 mCi/mmol; PerkinElmer Life Sciences, Boston, MA). Blanks contained homogenization buffer instead of the tissue homogenate. Samples were preincubated for 15 min on ice, transferred to a 37°C water bath for 30 min, and the reaction terminated by placing the samples on ice. Labeled acetylcholine was then extracted and counted in a liquid scintillation counter, and the activity was determined relative to DNA or protein.
TH activity was measured using [14C]tyrosine as a substrate and trapping the evolved 14CO2 after coupled decarboxylation with DOPA decarboxylase (Lau et al. 1988 (link); Waymire et al. 1971 (link)). Homogenates were sedimented at 26,000 × g for 10 min to remove storage vesicles containing catecholamines, which interfere with TH activity, and assays were conducted with 100 μL aliquots of the supernatant solution in a total volume of 550 μL. Each assay contained final concentrations of 910 μM FeSO4, 55 μM unlabeled l-tyrosine (Sigma), 9.1 μM pyridoxal phosphate (Sigma), 36 μM β-mercaptoethanol, and 180 μM 2-amino-6,7-dimethyl-4-hydroxy-5,6,7,8-tetrahydropteridine HCl (Sigma), all in a buffer of 180 mM sodium acetate and 1.8 mM sodium phosphate (pH 6.1). Each assay contained 0.5 μCi of generally labeled [14C]tyrosine (specific activity, 438 mCi/mmol; Sigma) as substrate, and blanks contained buffer in place of the homogenate.
Full text: Click here
Publication 2005
2-Mercaptoethanol 5,6,7,8-tetrahydropteridine Acetylcholine Bath Biological Assay Buffers Catecholamines Cells Choline Chloride Coenzyme A, Acetyl Decarboxylation Dopa Decarboxylase Edetic Acid Magnesium Chloride Physostigmine Potassium potassium phosphate Proteins Pyridoxal Phosphate Scintillation Counters Serum Albumin, Bovine Sodium Sodium Acetate Sodium Chloride sodium phosphate Tissues Triton X-100 Tyrosine
The serum of 24 informed patients (21 with chronic hepatitis C and 3 with decompensated alcoholic cirrhosis) were prospectively collected in the Department of Hepato-Gastroenterology of the Pitié-Salpêtrière Hospital, in Paris, France. The main characteristics of the included patients are outlined in Table 1. Sera were separated in the above reference laboratory, conserved at + 4°C and distributed to ten different laboratories, in France, within 24 hours. For two laboratories, serum was missing for at least one patient; therefore, these laboratories have been excluded from the core analysis. Sensitivity analyses including these two excluded laboratories did not change the results or conclusions (data not shown).
Characteristics of the analyzer, reagents and analytical methods employed used in the nine included laboratories are detailed in Table 4. Eleven different analyzers were used. For the measurement of ALT activity, five laboratories used a standardized method according to the IFCC, with pyridoxal phosphate, and four without pyridoxal phosphate. For the measurement of GGT activity, the nine laboratories used the Szasz method; including in four a recommended method of standardization [11 (link)].
Haptoglobin and apolipoprotein A1 were assayed by immunoturbidimetric or immunonephelemetric methods. α2-macroglobulin was assayed by immunonephelemetry. Analytical measurements of α2-macroglobulin and haptoglobin were standardized against the certified international reference material 470 (CRM 470). Apolipoprotein A1 assays adapted on the different analyzers were standardized against the reference material of World Health Organization-International Federation of Clinical Chemistry SP1-01 (WHO-IFCC SP1-01), except on the Advia-Bayer-analyzer (ADVIA). Total bilirubin was assayed by diazoreactions methods.
Statistical analysis used multiple measure variance analyses and Passing-Bablok linear regression analyses for the comparison of inter-laboratory results, and kappa statistics for the predicted histological features. Multiple comparisons used Bonferroni (versus control) and Tukey-Kramer multiple-comparison tests. Number Cruncher Statistical Systems software was used [12 ]. The linear relationship between laboratories and reference center were assessed with confidence limits for the slope and the intercept and the number of pairs out of bounds; they were used to determine whether there was only a chance difference between the slope and 1 and between the intercept and 0 [13 (link)]. Means were expressed with standard deviation (sd), except for kappa statistics.
Publication 2002
alpha 2-Glucoproteins Apolipoprotein A-I Bilirubin Haptoglobins Hepatitis C, Chronic Hypersensitivity Liver Cirrhosis, Alcoholic Patients Pyridoxal Phosphate Serum

Most recents protocols related to «Pyridoxal Phosphate»

Serum ALT and LDH levels were measured using the 7500 Clinical Analyzer (Hitachi High-Technologies Corporation, Tokyo, Japan). LDH was assayed using an enzymatic rate method with lactate as a substrate, and we confirmed that the origin of LDH was mainly from liver tissue using the LDH isozymes test. ALT assay was performed without pyridoxal phosphate supplementation. This facility’s normal ranges of ALT and LDH were 6 to 30 and 119 to 229 U/L, respectively. To focus on the degree of elevation, we set up an index calculated by the following formula: ALT/LDH ratio = (serum ALT − ULN)/(serum LDH − ULN) (ULN: upper limit of normal) as described previously.[20 (link)]
Publication 2023
Biological Assay Enzymes Isoenzymes Lactate Liver Pyridoxal Phosphate Serum Tissues
pCold I and pCold TF vectors, as well as restriction endonucleases, were purchased from Takara Corporation (Dalian, China). DNA polymerase and T4 DNA ligase were obtained from Vazyme Biotechnology Corporation (Nanjing, China). The ClonFast kit was acquired from Obio Technology Corporation (Shanghai, China). 2,2′-Dipyridyl, DTT, L-cysteine, L-alanine, L-glutathione reduced (GSH), and deamino-NADH were purchased from Merck (Darmstadt, Germany). Pyridoxal-5′-phosphate was obtained from Sangon Biotechnology Corporation (Shanghai, China). All primers were synthesised by BGI (Shenzhen, China). The remaining chemicals were of analytical grade.
Full text: Click here
Publication 2023
Alanine Cloning Vectors Cysteine DNA-Directed DNA Polymerase DNA Restriction Enzymes nicotinamide-hypoxanthine dinucleotide Oligonucleotide Primers Pyridoxal Phosphate T4 DNA Ligase
Anaesthetized mice (urethane, 1.2 g•kg−1i.p.) were rapidly euthanized by decapitation. Following rapid removal of the brainstem, the tissue was flash frozen in liquid N2. Flash frozen tissues were stored at –80 °C until coronal brainstem sections (300 μm thick) were cut with a cryostat at –20 °C and tissue punches of desired tissue were procured for immediate H2S measurements. The hypoglossal nucleus and control (inferior olive nucleus) brainstem tissue punches were made from the slices using a chilled micro-punch needle. Hypoglossal tissue from a single brainstem was not sufficient for effectively measuring H2S levels; therefore, we pooled bilateral micro punched tissue from two mice for each sample where H2S levels measured. H2S levels were determined as described previously Yuan et al., 2016 (link). Briefly, cell homogenates from the pooled micro-punch tissue samples were prepared in 100  mM potassium phosphate buffer (pH 7.4). The enzyme reaction was carried out in sealed tubes. The assay mixture in a total volume of 500 μL contained (in final concentration): 100  mM potassium phosphate buffer (pH 7.4), 800 μM l-cysteine, 80 μM pyridoxal 5′-phosphate with or without L-PAG (20 µM) and cell homogenate (20 μg of protein), was incubated at 37 °C for 1  hr. At the end of the reaction, alkaline zinc acetate (1% mass / volume; 250 μL) and trichloroacetic acid (10% vol/vol) were sequentially added to trap H2S and stop the reaction, respectively. The zinc sulfide formed was reacted with acidic N,N-dimethyl-p-phenylenediamine sulfate (20 μM) and ferric chloride (30 μM) and the absorbance was measured at 670  nm using Shimadzu UV-VIS Spectrophotometer. L-PAG inhibitable H2S concentration was calculated from a standard curve and values are expressed as nanomoles of H2S formed per hour per mg of protein.
Full text: Click here
Publication 2023
Acids Biological Assay Brain Stem Buffers Cell Nucleus Cells Cysteine Decapitation dimethyl-4-phenylenediamine Enzymes ferric chloride Freezing Mus Needles Olivary Nucleus potassium phosphate Proteins Pyridoxal Phosphate Sulfates, Inorganic Tissues Trichloroacetic Acid Urethane Zinc Acetate zinc sulfide
The involvement of histidine, lysine, tyrosine, and arginine residues in the catalytic action of the enzyme was examined by testing the effect of amino-acid-modifying reagents diethyl pyrocarbonate, pyridoxal 5’-phosphate, 1-acetylimidazole, and phenylglyoxal (Merck, Rahway, NJ, USA), respectively. Stock solution of diethyl pyrocarbonate was prepared by diluting in cold absolute ethanol and quantifying the actual concentration by reaction with 10 mM imidazole (Serva, Heidelberg, Germany) in 0.1 M sodium phosphate, pH 7.3, to form N-carbethoxyimidazole, with a molar absorption coefficient of 3000 M- 1·cm−1 at 230 nm [31 (link)]. The other reagents were dissolved in phosphate buffer. The reactions with enzyme were carried out at 30 °C or at 0 °C in 0.1 M sodium phosphate, pH 7.3. At various times, aliquots were removed and assayed for residual activity. When working with diethyl pyrocarbonate, the inactivation reaction in withdrawn samples was rapidly quenched by twofold dilution with 20 mM imidazole before activity assaying.
To determine the apparent reaction rate constant (kapp) values for enzyme inactivation, a pseudo-first-order kinetics model was used in the form

where kapp is the apparent rate constant, and A(0) and A(t) are the activities at the beginning and after time t of the reaction. For a one-step inactivation mechanism, the apparent rate constant should increase linearly with the initial concentration of inactivator [I]0:
The slope of the resulting line provides the second-order rate constant (k) for inactivation [32 (link)].
Diethyl pyrocarbonate and 1-acetylimidazole hydrolyze in aqueous solutions. The first-order rate constant k′ for hydrolysis was determined by assaying time courses of changes in concentration in reaction buffer without enzyme. The progress of hydrolysis of diethyl pyrocarbonate was monitored by sampling into imidazole quench solution and measuring the absorbance at 230 nm as described above. The disappearance of 1-acetylimidazole was followed continuously at 243 nm. Taking into account the decomposition of the reagent, the rate equation for loss of enzyme activity is to be modified to [33 (link)]:
Each modification experiment was repeated several times with different concentrations of modifying agent and sampling intervals and the data from a typical experiment are presented.
Full text: Click here
Publication 2023
Amino Acids Arginine Buffers Catalysis Cold Temperature Diethyl Pyrocarbonate enzyme activity Enzymes Ethanol Histidine Hydrolysis imidazole Kinetics Lysine Molar N-acetylimidazole Phenylglyoxal Phosphates Pyridoxal Phosphate sodium phosphate Technique, Dilution Tyrosine
Measurement of the H2S production capacity in tissues was performed as previously described.17 (link),27 (link) In brief, 80 μg of protein was incubated in 10 mM L-cysteine and 1 mM pyridoxal 5′-phosphate hydrate (Sigma-Aldrich, St Louis, MO), or 20 μL of plasma was incubated in 100 mM L-cysteine and 10 mM pyridoxal 5′-phosphate hydrate. This mixture was sealed under lead acetate paper and incubated until black lead sulfide precipitate was detected, but not saturated. The lead sulfide presence was quantified using Fiji software, version 1.53f51 (available at: http://fiji.sc/Fiji).
Full text: Click here
Publication 2023
Cysteine lead acetate lead sulfide Plasma Proteins Pyridoxal Phosphate Tissues

Top products related to «Pyridoxal Phosphate»

Sourced in United States, Germany
Pyridoxal-5'-phosphate is a coenzyme form of vitamin B6. It serves as a cofactor for various enzymatic reactions in the body, primarily involved in amino acid metabolism.
Sourced in United States, Germany, United Kingdom, Italy, France, Canada, Poland, Sao Tome and Principe, Norway, Japan, Sweden, China, Israel, Macao, Switzerland, Spain, Austria, Brazil
L-cysteine is an amino acid that serves as a key component in the manufacturing of various laboratory reagents and equipment. It functions as a building block for proteins and plays a crucial role in the formulation of buffers, cell culture media, and other essential laboratory solutions.
Sourced in United States
Pyridoxal phosphate is a coenzyme form of vitamin B6. It is an essential cofactor for various enzymatic reactions in the body, including amino acid metabolism, gluconeogenesis, and neurotransmitter synthesis.
Sourced in United States
Pyridoxal 5'-phosphate hydrate is a chemical compound that serves as a coenzyme in various enzymatic reactions. It is the active form of vitamin B6 and plays a crucial role in protein metabolism, amino acid synthesis, and neurotransmitter production.
Sourced in United States, Germany, United Kingdom, China, France, Italy, Spain, Sao Tome and Principe, Macao, Switzerland, Poland, Japan, India, Canada, Belgium, Denmark, Australia, Sweden, Brazil, Austria, Singapore, Israel, Portugal, Argentina, Mexico, Norway, Greece, Ireland
Glucose is a laboratory equipment used to measure the concentration of glucose in a sample. It is a fundamental tool in various medical and scientific applications, including the diagnosis and monitoring of diabetes, metabolic research, and food analysis.
Sourced in United States, Germany, United Kingdom, China, Sao Tome and Principe, Italy, Japan, Macao, Spain, Canada, France, Switzerland, Ireland, Sweden, Australia
ATP is a laboratory instrument used to measure the presence and concentration of adenosine triphosphate (ATP) in various samples. ATP is a key molecule involved in energy transfer within living cells. The ATP product provides a reliable and accurate method for quantifying ATP levels, which is useful in applications such as microbial detection, cell viability assessment, and ATP-based assays.
Sourced in United States, Germany, United Kingdom, Italy, Switzerland, France, Japan, Macao, Canada, Sao Tome and Principe, China, Belgium, Australia, Austria, Israel, Poland, Spain, Denmark, Sweden, Ireland, India, Portugal
Sodium pyruvate is a chemical compound that functions as an energy source and metabolic intermediate in cell culture media. It is commonly used as a supplement in cell culture applications to support cell growth and metabolism.
Sourced in United States, Germany, United Kingdom, Denmark, France, Austria, Japan, Italy, Macao, China
Pyruvate is a chemical compound that serves as an intermediate in various metabolic pathways. It is a key product of glycolysis and can be further metabolized through different processes, such as the citric acid cycle or lactate production. Pyruvate is a versatile molecule that plays a central role in cellular energy production and various biochemical reactions.
Sourced in United States, Germany, Australia, Japan
Suramin is a laboratory chemical compound that functions as an inhibitor of various enzymes and biological processes. It is commonly used in research applications to study the mechanisms and effects of enzyme inhibition. Suramin exhibits a broad range of biological activities, making it a versatile tool for scientific investigations.
Sourced in United States, Germany, United Kingdom, Italy, India, France, Canada, China, Sao Tome and Principe, Spain, Belgium, Macao, Ireland, Australia, Poland
Glycine is a colorless, crystalline amino acid that is used as a raw material in the production of various pharmaceutical and chemical products. It serves as a key component in buffer solutions and is commonly employed in the preparation of cell culture media and various biological assays.

More about "Pyridoxal Phosphate"

Pyridoxal-5'-phosphate (PLP) is a crucial coenzyme form of vitamin B6 that plays a vital role in numerous metabolic processes within the human body.
As a cofactor for various enzymes, PLP is essential for the proper functioning of the nervous system, immune system, and the development of red blood cells.
PLP is involved in the metabolism of amino acids, lipids, and carbohydrates, making it a key player in a wide range of physiological and pathological conditions.
Researching the role of PLP in health and disease can provide valuable insights.
Optimizing research protocols for reproducibilty and accuracy is crucial when investigating this important biomolecule.
Leveraging tools like PubCompare.ai's AI-driven platform can help researchers easily locate and compare protocols from literature, preprints, and patents, ensuring they identify the best approach for their PLP-related studies.
PLP, also known as pyridoxal 5'-phosphate or pyridoxal phosphate, is essential for the proper functioning of various enzymes, including those involved in the metabolism of L-cysteine, glucose, ATP, sodium pyruvate, pyruvate, and glycine.
Investigating the interplay between PLP and these related compounds can lead to a deeper understanding of the complex biological processes they influence.
By incorporating synonyms, related terms, and key subtopics, researchers can enhance their PLP-focused studies and unlock new discoveries that contribute to our understanding of this vital coenzyme and its impact on human health and disease.