All patient samples in this study were reviewed and approved by the Stanford Institutional Review Board in accordance with the Declaration of Helsinki. Tonsils were collected as part of routine tonsilectomy procedures at Lucile Packard Children’s Hospital at Stanford University with informed consent for research use, and then mechanically disaggregated before cell suspensions were cryopreserved (Supplementary Fig. 3b ). Peripheral blood mononuclear cells (PBMCs) were isolated from specimens taken before and immediately following four weekly doses of infusional rituximab (375 mg m−2) monotherapy for extranodal marginal zone lymphoma (EMZL) in a subject without measurable circulating disease (patient 1 in Supplementary Fig. 4c ). PBMCs were respectively isolated from specimens taken immediately following four cycles and six cycles of RCHOP immunochemotherapy for treatment of DLBCL (patients 2 and 3 in Supplementary Fig. 4c ). PBMCs were also isolated from a subject following four cycles of Rituximab for treatment of FL (patient 4 in Supplementary Fig. 4c ); this subject had ~2% circulating lymphoma cells at diagnosis, which were undetectable by CIBERSORT and flow cytometry following four Rituximab infusions. Specimens of adjacent normal lung tissue were obtained during surgical resection of early stage non-small cell lung tumors (Fig. 2h ). Surgical tissue biopsies were obtained from untreated FL patients enrolled in a Phase III clinical trial (NCT0001729018 (link)) (Fig. 2i and Fig. 3c ). Lastly, PBMCs were obtained from 20 adults of varying ages receiving influenza immunization (NCT01827462) (Fig. 3a ), and from seven adults consisting of patient 4 in Supplementary Fig. 4c and six healthy subjects (Fig. 3b , which includes patient 4).
>
Disorders
>
Neoplastic Process
>
Mucosa-Associated Lymphoid Tissue Lymphoma
Mucosa-Associated Lymphoid Tissue Lymphoma
Mucosa-Associated Lymphoid Tissue Lymphoma (MALT): A type of non-Hodgkin lymphoma that arises from marginal zone B cells in mucosa-associated lymphoid tissue.
MALT lymphomas typically develop in the stomach, but can also occur in other sites such as the salivary glands, thyroid, lung, and small intestine.
These lymphomas are often associated with chronic inflammation or autoimmune disorders.
Accurate diagnosis and optimization of research protocols are crucial for improved understanding and treatment of this rare form of lymphoma.
MALT lymphomas typically develop in the stomach, but can also occur in other sites such as the salivary glands, thyroid, lung, and small intestine.
These lymphomas are often associated with chronic inflammation or autoimmune disorders.
Accurate diagnosis and optimization of research protocols are crucial for improved understanding and treatment of this rare form of lymphoma.
Most cited protocols related to «Mucosa-Associated Lymphoid Tissue Lymphoma»
Adult
Biopsy
Cells
Child
Diagnosis
Ethics Committees, Research
Flow Cytometry
Healthy Volunteers
Lung
Lung Neoplasms
Lymphoma
Mucosa-Associated Lymphoid Tissue Lymphoma
Operative Surgical Procedures
Palatine Tonsil
Patients
PBMC Peripheral Blood Mononuclear Cells
Rituximab
Tissues
Tonsillectomy
Vaccination
Virus Vaccine, Influenza
All patient samples in this study were reviewed and approved by the Stanford Institutional Review Board in accordance with the Declaration of Helsinki. Tonsils were collected as part of routine tonsilectomy procedures at Lucile Packard Children’s Hospital at Stanford University with informed consent for research use, and then mechanically disaggregated before cell suspensions were cryopreserved (Supplementary Fig. 3b ). Peripheral blood mononuclear cells (PBMCs) were isolated from specimens taken before and immediately following four weekly doses of infusional rituximab (375 mg m−2) monotherapy for extranodal marginal zone lymphoma (EMZL) in a subject without measurable circulating disease (patient 1 in Supplementary Fig. 4c ). PBMCs were respectively isolated from specimens taken immediately following four cycles and six cycles of RCHOP immunochemotherapy for treatment of DLBCL (patients 2 and 3 in Supplementary Fig. 4c ). PBMCs were also isolated from a subject following four cycles of Rituximab for treatment of FL (patient 4 in Supplementary Fig. 4c ); this subject had ~2% circulating lymphoma cells at diagnosis, which were undetectable by CIBERSORT and flow cytometry following four Rituximab infusions. Specimens of adjacent normal lung tissue were obtained during surgical resection of early stage non-small cell lung tumors (Fig. 2h ). Surgical tissue biopsies were obtained from untreated FL patients enrolled in a Phase III clinical trial (NCT0001729018 (link)) (Fig. 2i and Fig. 3c ). Lastly, PBMCs were obtained from 20 adults of varying ages receiving influenza immunization (NCT01827462) (Fig. 3a ), and from seven adults consisting of patient 4 in Supplementary Fig. 4c and six healthy subjects (Fig. 3b , which includes patient 4).
Adult
Biopsy
Cells
Child
Diagnosis
Ethics Committees, Research
Flow Cytometry
Healthy Volunteers
Lung
Lung Neoplasms
Lymphoma
Mucosa-Associated Lymphoid Tissue Lymphoma
Operative Surgical Procedures
Palatine Tonsil
Patients
PBMC Peripheral Blood Mononuclear Cells
Rituximab
Tissues
Tonsillectomy
Vaccination
Virus Vaccine, Influenza
A total of 249 cases of MALT lymphoma were included in this study, originating from the ocular adnexa (n=115), salivary gland (n=58), stomach (n=36), thyroid (n=13), lung (n=13), and other sites (n=14); 179 of these cases had been the subject of a previous study for somatic mutation in 17 genes.17 (link) Genomic DNA was extracted from tumor rich areas (>40%) of formalin fixed paraffin embedded (FFPE) lymphoma biopsies in 217 cases, and where possible from non-neoplastic cells by microdissection using the QIAamp DNA micro kit (Qiagen, the Netherlands). Additionally, high molecular weight DNA was available in 32 cases of MALT lymphoma. DNA quality was assessed by PCR amplification of variably sized genomic fragments, with those amenable to PCR of ≥300bp genomic fragment used for mutation analyses by targeted sequencing.19 (link) Among the cases included in this study, clinical information such as site involvement and treatment details were available in 98 cases of ocular adnexal MALT lymphomas, and their correlation with genetic changes was examined. Local ethical guidelines for the use of archival tissues for research were adopted with the approval of the ethics committees of the institutions involved.
Adnexa Uteri
Biopsy
Cells
Eye
Formalin
Gene Therapy, Somatic
Genome
Institutional Ethics Committees
Lung
Lymphoma
Microdissection
Mucosa-Associated Lymphoid Tissue Lymphoma
Mutation
Neoplasms
Paraffin Embedding
Salivary Glands
Stomach
Thyroid Gland
Tissues
B-Lymphocytes
Cereals
Diagnosis
Diffuse Large B-Cell Lymphoma
Farmers
Genetic Heterogeneity
Lymphoid Leukemia
Lymphoma, Follicular
Lymphoma, Non-Hodgkin, Familial
Malignant Neoplasms
Mantle-Cell Lymphoma
Mucosa-Associated Lymphoid Tissue Lymphoma
Pesticides
Systemic Inflammatory Response Syndrome
T-Lymphocyte
Workers
Aspiration Biopsy, Fine-Needle
B-Cell Lymphomas
Biopsy
Burkitt Lymphoma
Canis familiaris
CD30+ Anaplastic Large Cell Lymphoma
Cell Nucleus
Cells
Cytological Techniques
Diagnosis
Diffuse Large B-Cell Lymphoma
Ethics Committees, Research
Euthanasia
Flow Cytometry
Institutional Animal Care and Use Committees
Lymphoma
Lymphoma, Follicular
Mucosa-Associated Lymphoid Tissue Lymphoma
Mus
Neoplasms
Nodes, Lymph
Phenotype
Population Group
SCID Mice
Specific Pathogen Free
Sterility, Reproductive
Tissues
Woman
Xenografting
Most recents protocols related to «Mucosa-Associated Lymphoid Tissue Lymphoma»
Patient samples were obtained with informed consent and with the approval of the Liverpool Research Ethics Committee. All experiments using primary MCL cells were approved by LHP SPARK Non-Interventional Sponsorship Sub Committee. Formalin fixed, paraffin embedded tissue samples were obtained from the SLO of 27 patients with B-NHL [9 CLL/small lymphocytic leukaemia (SLL), 10 FL, 8 diffuse large B cell lymphoma (DLBCL), 4 MCL, 3 splenic marginal-zone lymphoma (SMZL) and 2 nodal MZL]. Peripheral blood mononuclear cells (PBMC) were obtained from 6 MCL patients with blood involvement. Clinical data linked to the MCL samples are shown in Supplementary Table 1 .
The MCL cell lines Maver-1, Mino and Jeko-1 and the HS-5 stromal cell line (DMSZ, Germany) were used.
The MCL cell lines Maver-1, Mino and Jeko-1 and the HS-5 stromal cell line (DMSZ, Germany) were used.
BLOOD
Cell Lines
Cells
Diffuse Large B-Cell Lymphoma
Ethics Committees, Research
Formalin
LINE-1 Elements
Lymphoid Leukemia
Mucosa-Associated Lymphoid Tissue Lymphoma
Paraffin
Patients
PBMC Peripheral Blood Mononuclear Cells
Spleen
Stromal Cells
Tissues
Flow cytometric results from patients who were diagnosed with mature B-cell neoplasms from October 2015 to October 2020, were reviewed retrospectively. Each case represented a primary diagnosis of lymphoma that was made based on an incisional or excisional tissue biopsy or fine-needle aspiration biopsy specimens. Histologic slides including immunohistochemical slides, were reviewed without knowledge of the flow cytometric results to confirm the initial diagnoses in all available cases. The diagnosis was made according to the World Health Organization (WHO) 2008 classification (12 (link)), WHO 2017 classification,and WHO 2022 classification (2 , 3 (link), 13 (link)). These patients included 119 patients with DLBCL, 25 patients with Burkitt lymphoma, 67 patients with MCL, 76 patients with follicular lymphoma (FL), 30 patients with marginal zone lymphoma (MZL), 32 patients with lymphoplasmacytic lymphoma (LPL)/Waldenstrom’s macroglobulinemia (WM), 159 patients with chronic lymphocytic leukemia (CLL)/small lymphocytic lymphoma (SLL), 5 patients with hairy cell leukemia, 4 patients with mucosa-associated lymphoid tissue lymphoma (MALT-L), and 42 patients with transformed lymphoma. For the diagnosis, Ki67 expression in lymphoma cells was detected in the bone marrow, pleural effusion, and ascites or lymph node samples. The present study was approved by the Ethical Committee of Tongji Hospital, Tongji Medical College, and Huazhong University of Science and Technology (permit number TJ-IRB20200716), and all procedures conducted followed the protocols of the Declaration of Helsinki.
Ascites
Aspiration Biopsy, Fine-Needle
B-Cell Lymphomas
Biopsy
Bone Marrow
Burkitt Lymphoma
Cells
Chronic Lymphocytic Leukemia
Diagnosis
Flow Cytometry
Hairy Cell Leukemia
Lymphoma
Lymphoma, Follicular
Mucosa-Associated Lymphoid Tissue Lymphoma
Nodes, Lymph
Patients
Pleural Effusion
Tissues
Waldenstrom Macroglobulinemia
Patients with gastric MALT lymphoma treated at our center between October 2006 and September 2020 and who received eradication therapy as frontline treatment were included in this study. Patients who received any other frontline treatment and lost follow-up cases were excluded. Treatment outcomes for all 137 cases were examined according to API2-MALT1 mutation and Hp infection status. Subsequently, in cases negative for both API2-MALT1 and Hp infection, the impact of the gene expression profile on response to eradication therapy was analyzed.
Infection
MALT1 protein, human
Mucosa-Associated Lymphoid Tissue Lymphoma
Mutation
Patients
Stomach
Therapeutics
Participant variables included sex (male/female), race (White/Black/others), age at diagnosis (< 60 years/≥ 60 years) (15 (link)), year of diagnosis (2007–2011/2012–2016), marital status (married/unmarried), pathological type (DLBCL/others), surgery (yes/no evidence), radiotherapy (yes/no evidence), and chemotherapy (yes/no evidence) (9 (link)). Other races included American Indian/Alaska Native and Asian/Pacific Islander. Other pathological types included precursor non-Hodgkin B-cell lymphoma; chronic/small lymphocytic leukemia/lymphoma; mantle-cell lymphoma; lymphoplasmacytic lymphoma; intravascular large B-cell lymphoma; Burkitt lymphoma/leukemia; extranodal margin zone lymphoma (MZL); mucosa-associated lymphoid tissue (MALT) cell lymphoma; follicular lymphoma; plasmacytoma; multiple myeloma/plasma-cell leukemia; non-Hodgkin 1ymphoma, B-cell, not otherwise specified (NOS); peripheral T-cell lymphoma, NOS; anaplastic large cell lymphoma, T-/null-cell lymphoma; adult T-cell leukemia/lymphoma; and non-Hodgkin lymphoma, NOS, unknown lineage (12 ).
NCSS was defined as the period from the date of diagnosis to death from non-cancer-specific causes (5 (link)). Follow-up time was calculated as the period from the date of diagnosis with PCNSL until the date of death or last follow-up on December 31, 2016.
NCSS was defined as the period from the date of diagnosis to death from non-cancer-specific causes (5 (link)). Follow-up time was calculated as the period from the date of diagnosis with PCNSL until the date of death or last follow-up on December 31, 2016.
Alaskan Natives
American Indians
Asian Persons
B-Lymphocytes
Burkitt Leukemia
Burkitt Lymphoma
CD30+ Anaplastic Large Cell Lymphoma
Cells
Chronic Lymphocytic Leukemia
Diagnosis
Leukemia
Leukemia, Plasma Cell
Lymphoma
Lymphoma, Follicular
Lymphoma, Non-Hodgkin, Familial
Males
Malignant Neoplasms
Mantle-Cell Lymphoma
Mucosa-Associated Lymphoid Tissue Lymphoma
Multiple Myeloma
Operative Surgical Procedures
Pacific Islander Americans
Peripheral T-Cell Lymphoma
Pharmacotherapy
Plasmacytoma
Pre-B Lymphocytes
Radiotherapy
Reticulosarcoma
T-Cell Leukemia-Lymphomas, Adult
T-Cell Lymphoma
Waldenstrom Macroglobulinemia
Woman
Zinostatin
The SPS cohort comprised 16 families including 39 patients (≥2 patients per family) diagnosed with SPS and fulfilling the 2010 World Health Organization (WHO) criteria (Snover et al., 2010 ), as the new WHO guidelines released in 2019 (Rosty et al., 2019 ) were not available when this study was developed. The complete clinical and somatic characterization of this cohort is available at (Soares de Lima et al., 2021 (link)). The presence of germline alterations in APC, MUTYH and DNA mismatch repair (MMR) genes was discarded for all probands.
One patient (AA3531, family SPS.7,Figure 1 ) presented a loss-of-function variant in the POLD1 gene (c.1941delG; p.Lys648fs*46). The variant co-segregated in other six family members, three of them affected with SPS (Figure 1 ; Supplementary Figure S1 ). A summary of clinical characteristics of family SPS.7 is shown in Table 1 .
The index case (III.1) was affected with 2 synchronous CRC at age 57 as well as more than 100 serrated polyps, and important proportion of them having a large size (>20 mm). Individual III.5 was diagnosed at 46 y. o. with MALT lymphoma (affecting gastrointestinal tract, breast and lung). A familial history of cancer was present with a paternal grandfather affected with stomach cancer at 48 y. o. and a maternal aunt diagnosed with cancer of unknown origin at 78 y. o.
Regarding the phenotype in the affected siblings, III.2 presented 11 polyps at 56–65 y. o., corresponding to one hyperplastic polyp in the rectum (3 mm), five sessile serrated lesions proximal to the rectum (5–8 mm) and 5 T/LGD (tubular, low-grade dysplasia) adenomas (4–8 mm) distributed all over her colon. III.3 presented 20 polyps <1 cm at 53–60 y. o., including 5 serrated polyps proximal to the rectum (5–6 mm), being four hyperplastic polyps and one sessile serrated lesion without dysplasia, and 15 T/LGD adenomas (<1 cm). III.4 presented 11 polyps at 49–57 y. o., comprising four serrated polyps being two sessile serrated lesions proximal to the rectum (>5 mm, <1 cm), and 7 T/LGD adenomas (one 1 cm at rectum, the rest <1 cm).
The study received the approval of Hospital Clínic de Barcelona Clinical Research Ethics committee (registration number 2013/8286). Written informed consent was obtained in all cases.
One patient (AA3531, family SPS.7,
The index case (III.1) was affected with 2 synchronous CRC at age 57 as well as more than 100 serrated polyps, and important proportion of them having a large size (>20 mm). Individual III.5 was diagnosed at 46 y. o. with MALT lymphoma (affecting gastrointestinal tract, breast and lung). A familial history of cancer was present with a paternal grandfather affected with stomach cancer at 48 y. o. and a maternal aunt diagnosed with cancer of unknown origin at 78 y. o.
Regarding the phenotype in the affected siblings, III.2 presented 11 polyps at 56–65 y. o., corresponding to one hyperplastic polyp in the rectum (3 mm), five sessile serrated lesions proximal to the rectum (5–8 mm) and 5 T/LGD (tubular, low-grade dysplasia) adenomas (4–8 mm) distributed all over her colon. III.3 presented 20 polyps <1 cm at 53–60 y. o., including 5 serrated polyps proximal to the rectum (5–6 mm), being four hyperplastic polyps and one sessile serrated lesion without dysplasia, and 15 T/LGD adenomas (<1 cm). III.4 presented 11 polyps at 49–57 y. o., comprising four serrated polyps being two sessile serrated lesions proximal to the rectum (>5 mm, <1 cm), and 7 T/LGD adenomas (one 1 cm at rectum, the rest <1 cm).
The study received the approval of Hospital Clínic de Barcelona Clinical Research Ethics committee (registration number 2013/8286). Written informed consent was obtained in all cases.
Adenoma
Breast
Colon
Diploid Cell
Ethics Committees, Clinical
Family Member
Gastric Cancer
Gastrointestinal Tract
Genes
Genetic Diversity
Germ Line
Grandfather
Hyperplasia
Lung
Malignant Neoplasms
Mismatch Repair
Mothers
Mucosa-Associated Lymphoid Tissue Lymphoma
MUTYH protein, human
Neoplasms, Unknown Primary
Patients
Phenotype
POLD1 protein, human
Polyps
Rectum
Sibling
Top products related to «Mucosa-Associated Lymphoid Tissue Lymphoma»
Sourced in United States, United Kingdom
The LIVE/DEAD Fixable Dead Cell Stain Kit is a fluorescent stain used to identify and distinguish between live and dead cells in a sample. The kit contains a dye that selectively stains dead cells, allowing for their detection and quantification through flow cytometry or other fluorescence-based analysis methods.
Sourced in United States
Anti-ICOS–PE is a laboratory reagent used in flow cytometry applications. It is a fluorescently-labeled antibody that binds to the ICOS (Inducible T-Cell Costimulator) protein expressed on the surface of certain immune cells. This reagent can be used to identify and quantify ICOS-positive cells in a sample.
Sourced in United States
The BD FACS LSR II™ is a flow cytometer designed for analyzing and sorting cells. It utilizes laser technology to detect and measure various characteristics of cells passing through a fluid stream. The core function of the BD FACS LSR II™ is to provide quantitative data about the physical and biochemical properties of cells within a sample.
Anti-CD127 FITC is a fluorescent-labeled antibody that binds to the CD127 (IL-7 receptor alpha) surface antigen. It is commonly used in flow cytometry applications to identify and quantify cells expressing CD127.
Anti-CD25 APC-Cy7 is a fluorescently-labeled monoclonal antibody that binds to the CD25 cell surface antigen. The APC-Cy7 fluorescent label allows for detection and analysis of CD25-expressing cells using flow cytometry.
Sourced in United States, Germany, United Kingdom, Switzerland, Israel, France, Australia
The Bond RX is a compact and versatile laboratory equipment designed for a wide range of applications. It offers reliable performance and consistent results, making it a valuable tool for researchers and scientists.
Sourced in United States, Germany, United Kingdom, Canada, Australia, Japan, France, China
TRIzol LS is a guanidinium-based reagent used for the isolation of total RNA from various samples, including liquid samples. It is designed to effectively lyse cells and solubilize cellular components while maintaining the integrity of the extracted RNA.
Anti-TCRγδ is a laboratory reagent used for the detection and analysis of the gamma-delta T cell receptor (TCR) in research applications. It is a specific antibody that binds to the TCR γ and δ chains, allowing for the identification and quantification of gamma-delta T cells in various samples.
Sourced in United States
Anti-IL-23 is a laboratory reagent used in research applications. It is a monoclonal antibody specific for the interleukin-23 (IL-23) protein. IL-23 is a cytokine that plays a role in inflammatory and autoimmune processes. Anti-IL-23 can be used to detect, quantify, or study IL-23 in various experimental settings.
Sourced in United States, China, United Kingdom
The Human Genome U133 Plus 2.0 Array is a high-density oligonucleotide microarray designed to analyze the expression of over 47,000 transcripts and variants from the human genome. It provides comprehensive coverage of the human transcriptome and is suitable for a wide range of gene expression studies.
More about "Mucosa-Associated Lymphoid Tissue Lymphoma"
Mucosa-Associated Lymphoid Tissue Lymphoma (MALT) is a rare form of non-Hodgkin lymphoma that arises from marginal zone B cells in mucosa-associated lymphoid tissue.
These lymphomas typically develop in the stomach, but can also occur in other sites like the salivary glands, thyroid, lung, and small intestine.
MALT lymphomas are often associated with chronic inflammation or autoimmune disorders.
Accurate diagnosis and optimization of research protocols are crucial for improved understanding and treatment of MALT lymphoma.
Techniques like the LIVE/DEAD Fixable Dead Cell Stain Kit, Anti-ICOS–PE, and BD FACS LSR II™ flow cytometer can be used to analyze cell populations and marker expression.
Additionally, Anti-CD127 FITC, Anti-CD25 APC-Cy7, and Anti-TCRγδ antibodies can help identify and characterize the lymphoma cells.
Researchers can also utilize tools like Bond RX and TRIzol LS to prepare and process tissue samples, while Anti-IL-23 and Human Genome U133 Plus 2.0 Array can provide insights into the underlying molecular mechanisms and gene expression patterns in MALT lymphoma.
By optimizing research protocols and leveraging the latest technological advancements, scientists can enhance the reproducibility and accuracy of their studies, ultimately leading to a better understanding and more effective treatment options for patients with this rare form of lymphoma.
PubCompare.ai can assist in this process by comparing research protocols from literature, pre-prints, and patents to identify the best approaches for your MALT lymphoma research.
These lymphomas typically develop in the stomach, but can also occur in other sites like the salivary glands, thyroid, lung, and small intestine.
MALT lymphomas are often associated with chronic inflammation or autoimmune disorders.
Accurate diagnosis and optimization of research protocols are crucial for improved understanding and treatment of MALT lymphoma.
Techniques like the LIVE/DEAD Fixable Dead Cell Stain Kit, Anti-ICOS–PE, and BD FACS LSR II™ flow cytometer can be used to analyze cell populations and marker expression.
Additionally, Anti-CD127 FITC, Anti-CD25 APC-Cy7, and Anti-TCRγδ antibodies can help identify and characterize the lymphoma cells.
Researchers can also utilize tools like Bond RX and TRIzol LS to prepare and process tissue samples, while Anti-IL-23 and Human Genome U133 Plus 2.0 Array can provide insights into the underlying molecular mechanisms and gene expression patterns in MALT lymphoma.
By optimizing research protocols and leveraging the latest technological advancements, scientists can enhance the reproducibility and accuracy of their studies, ultimately leading to a better understanding and more effective treatment options for patients with this rare form of lymphoma.
PubCompare.ai can assist in this process by comparing research protocols from literature, pre-prints, and patents to identify the best approaches for your MALT lymphoma research.