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> Disorders > Neoplastic Process > Nasopharyngeal Carcinoma

Nasopharyngeal Carcinoma

Nasopharyngeal Carcinoma: A malignant neoplasm arising from the epithelial cells lining the nasopharynx.
It is a rare cancer, but is the most common type of head and neck cancer in some regions, particularly Southeast Asia.
Nasopharyngeal carcinoma is associated with Epstein-Barr virus infection and can present with nonspecific symptoms like nasal congestion, hearing loss, and headaches.
Early diagnosis and appropriate treatment are critical for improving outcomes in patients with this disease.

Most cited protocols related to «Nasopharyngeal Carcinoma»

Four hundred thirty cases of paired tumor-normal whole-exome sequencing data were obtained from the Sequence Read Archive51 (link): 338 chronic lymphocytic leukemia cases from 279 patients from Landau et al,52 (link) 32 cutaneous T-cell lymphoma cases from Choi et al,53 (link) 51 nasopharyngeal carcinoma cases from Zheng h et al,54 (link) and 8 cholangiocarcinoma cases from Ong et al.55 (link) Fifteen additional cholangiocarcinoma cases were obtained from the European Nucleotide Archive56 (link) from Chan-on et al.57 (link) All sample identifiers used are available in the Data Supplement. These cases were processed via L-MAP. Tumor and normal samples were downloaded in the FASTQ format using fastq-dump.51 (link) Alignment to hg38 was performed by using bwa (version 0.7.12)58 (link) with the mem algorithm. Duplicate reads were marked and removed by using Picard Mark- Duplicates.59 Base quality score recalibration and indel realignment were performed by using GATK,60 (link) and the resulting BAM files were sliced, as above, by using SAM tools.
Publication 2017
2'-deoxyuridylic acid Cholangiocarcinoma Chronic Lymphocytic Leukemia Dietary Supplements Europeans INDEL Mutation Lymphoma, T-Cell, Cutaneous Nasopharyngeal Carcinoma Neoplasms Nucleotides Patients

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Publication 2017
Breast Carcinoma Cell Lines Cells Clinical Protocols Culture Media Homo sapiens MCF-7 Cells Nasopharyngeal Carcinoma Patients Penicillin G Sodium Streptomycin Sulfate
A multi-step coregistration protocol between 68Ga-HBED-CC-PSMA PET/CT and histopathology was implemented (Figure 1). In the first step, whole-mount prostate slices were coregistered to the ex-vivo CT in a manner similar to the procedure described by Grosu et al. 21 (link). We used a fixation device (localizer) consisting of a customized cuvette with 4-mm-spaced markers, filled with agarose in which the prostate was embedded and fixated. The basic edges (ventral, dorsal, left, right) of the resected prostate were marked with special ink to support orientation of the prostate in the agarose-filled cuvette. The aim was to position the prostate in a similar orientation as in in-vivo CT. After ex-vivo CT scan of the localizer, the pathologic slices were cut perpendicular to the urethra and along the localizer markers using a customized cutting device (Supplementary Figure 1). Parallel 4-mm step-sections were cut in the same angle as the ex-vivo CT slices. PCa and non-malignant tissue was delineated on each histopathological slice by an experienced pathologist. Histopathological slices were than manually matched to the ex-vivo CT, using MITK software (MITK Workbench 2014.10.00, German cancer research center, Germany) under guidance of the 4-mm grid. The contours of PCa (PCa-histo) and non PCa (NPCa-histo) were manually transferred to corresponding CT slices. In the next step, a careful manual coregistration with additional non-rigid deformation (to account for ex-vivo changes) between ex-vivo CT (including PCa-histo and NPCa-histo) and in-vivo CT was performed in MITK by two experienced specialists in consensus.
Subsequently, PCa-histo contours were used to represent the PCa distribution in a 4-mm slice. The voxels in a 3D model were set to discrete values (PCa 1, non PCa 0.1, tissue outside the prostatic gland 0) in PMOD (PMOD v3.6, PMOD Technologies, Switzerland). To account for the obvious (three orders of magnitude) difference between the resolution of PSMA-PET and histology slices for correlation analyses, a Gaussian smoothing (FWHM 7 mm) of the discretized histological data was performed to create a so called histo-PET. Subsequently, rigid mutual information (MI) coregistration between PSMA PET and histo-PET was conducted in PMOD in order to account for minor in-vivo misalignments between PET and CT (i.e. due to bladder or bowel movements) and to overcome possible uncertainties between ex- and in-vivo CT coregistration (low soft-tissue contrast in CT).
Publication 2016
Defecation gallium GA-68 gozetotide Malignant Neoplasms Medical Devices Muscle Rigidity Nasopharyngeal Carcinoma Pathologists PET protocol Prostate Sepharose Specialists Tissues Urethra Urinary Bladder X-Ray Computed Tomography
Patients will be registered and immobilized using an individual immobilization system for both planning and treatment. Treatment planning will be performed about 10 working days prior to the start of CIRT. Planning CT without contrast will be performed and MRI taken in treatment position will be obtained and fused with planning CT. As all patients included in this study will have completed photon RT of 66 Gy or above, organs at risk such as the brain stem, optic nerve and chiasm, temporal lobes of the brain, and eyes will be contoured. Discount of the doses to the OARs from the initial radiation course was uniformly set at 70%, i.e., 30% residual doses were used to calculate the limiting dose to the OARs. Dose limitations of OARs will be controlled according to Emami et al20 (link).

Gross Tumor Volume (GTV) - will be defined as the gross disease seen on the planning CT, area of contrast enhancement on T1-weighted MRI, and lesion(s) with high SUV uptake observed on FDG-PET/CT (optional)

Clinical Target Volume (CTV) - CTV for gross tumor will be defined as the GTV + 3~5mm margin; the CTV for subclinical disease will be defined based on the clinical judgment for potential subclinical disease.

Planning Target Volume (PTV) - will be added depending on individual factors such as patient positioning or beam angles chosen and will range 3~6 mm

CIRT planning is performed using the Syngo treatment planning system (Siemens, Erlangen, Germany) including biologic plan optimization. Biologically effective dose distributions will be calculated using the a/ß ratio of 9 for nasopharyngeal cancer and 3 for late toxicity, respectively.
Publication 2016
Biopharmaceuticals Brain Brain Stem Carbon Ion Radiotherapy Clinical Reasoning Eye Immobilization Nasopharyngeal Carcinoma Optic Chiasms Optic Nerve Patients Radiotherapy Scan, CT PET Temporal Lobe Vision
All available hematoxylin and eosin (H&E) stained slides were reviewed by 2 pathologists (K.K. and W.D.T.) using an Olympus BX51 microscope (Olympus, Tokyo, Japan) with a standard 22-mm diameter eyepiece. Both pathologists had no knowledge of those patients’ clinical outcomes.
Tumors were graded by a degree of squamous differentiation into well, moderately, and poorly differentiated, in accordance with the 2004 WHO classification of lung carcinomas.7 In the well differentiated tumors, there were tumor nests composed of differentiated keratinocyte-like tumor cells with prominent keratinization (layered and cytoplasmic keratin) and intercellular bridges. In the poorly differentiated tumors, squamous morphology was only noticeable in a small area of the tumor. The moderately differentiated tumors showed an intermediate degree of squamous differentiation that was between well and poorly differentiated tumors.
Histologic subtyping was performed in a similar fashion to nasopharyngeal carcinomas in the 2005 WHO Classification, Pathology and Genetics of Head and Neck Tumours; they were classified as non-keratinizing, keratinizing, and basaloid squamous cell carcinomas.25 The percentage of keratinizing pattern, including layered (Fig. 1A) and cytoplasmic keratinization (Fig. 1B), was recorded and then tumors were classified as having a keratinizing subtype when there was ≥5% keratinizing pattern of the entire tumor while non-keratinizing subtypes were defined as having <5% keratinizing pattern (Fig. 1C). The basaloid pattern was defined as tumor nests showing prominent peripheral palisading of tumor cells with scanty cytoplasm (high nuclear/cytoplasmic ratio) and a greater amount of hyperchromatic nuclei (Fig. 1D).7 The percentage of basaloid pattern was recorded and then the tumors were classified as having a basaloid subtype if there was >50% basaloid pattern as previously recommended.26 , 27 (link) The percentage of papillary growth was recorded in 5% increments. Clear cell features were defined as tumor cells with clear cytoplasm and were recorded in 5% increments; it was considered present when ≥5% of the tumor cells had a clear cell pattern. No cases were classified as the small cell variant of squamous cell carcinoma, although occasional basaloid carcinomas had tumor cells that resembled small cell carcinoma.
After scanning through the entire set of tumor slides at intermediate-power fields at ×100 magnification, tumor budding and the size of the smallest tumor nest were assessed at the most invasive area with the maximal number of the smallest tumor nests. Tumor budding was defined as small tumor nests composed of less than 5 tumor cells (Fig.2A and 2B) and they were counted in 10 high-power fields (HPFs) at ×200 magnification.9 (link) According to the number of tumor budding counted in 10 HPFs, tumor budding was assessed 2 ways: 1) the maximum number of tumor budding per HPF among the 10 HPFs (maximum budding /1 HPF) and 2) the total number of tumor budding of 10 HPFs (total budding /10 HPFs). Based on the approach of previously published studies analyzing the prognostic significance of the tumor nest size assessed by the number of tumor cells,8 (link), 10 (link), 14 (link), 15 (link) the size of the smallest invasive tumor nest was classified into large nest (composed of >15 tumor cells), intermediate nest (5–15 tumor cells), small nest (2–4 tumor cells), and single cell invasion (Fig. 2C). The size of the smallest tumor nest was assessed 2 ways: 1) the tumor nests in entire tumor area and 2) the tumor nests infiltrating the tumor edge on the outside of the tumor.
The percentages of tumor necrosis and fibrosis were recorded. Tumor necrosis was considered present when there was ≥10% necrosis in the entire tumor.28 (link) When there was ≥50% fibrosis in the entire tumor, it was considered severe.29 (link) In addition, pleural invasion, which was classified as absent (PL0) or present (PL1, PL2 and PL3)22 , and lymphovascular invasion were investigated.
The nuclear features were evaluated according to the methodologies used in our previous publications.21 (link), 30 (link) They were assessed using a HPF at ×400 magnification (0.237mm2 field of view) at the region of the tumor with the greatest abnormal nuclear features. This was done after scanning through the entire set of tumor slides at intermediate-power fields at ×100 magnification. For nuclear diameter, we selected at least 3 HPFs with the largest nuclei and then calculated the average nuclear diameter of at least 100 tumor cells using nearby small lymphocytes (≈4.0 µm) as reference.19 (link) Nuclear atypia was recorded in the area of the tumor with the highest degree of atypia; at least 5% of the entire tumor area needed to be affected. The degree of atypia was assessed using the following gradation: mild atypia - uniform nuclei in size and shape; moderate atypia - nuclei in intermediate size with slight irregularity in shape; and severe atypia - enlarged nuclei of varied sizes and irregular contours with some nuclei at least twice as large as others. The nuclear/cytoplasmic (N/C) ratio was broken down into the following three categories: low N/C ratio (<1/3 nucleus to cytoplasm area), intermediate N/C ratio (1/3–2/3), and high N/C ratio (>2/3). Chromatin pattern was differentiated using two distinctions, finely granular and coarsely granular. The prominence of nucleoli was also broken down into 2 distinct categories: indistinct - inconspicuous at intermediate-power fields at ×100 magnifications, and distinct - conspicuous at intermediate-power fields. Intranuclear inclusions were determined as present or absent in an examination of 50 HPFs. Mitoses were evaluated in the 50 HPF areas that contained the highest mitotic activity and then were calculated as an average of mitotic figures per 10 HPFs (2.37mm2 area).21 (link), 30 (link) Atypical mitoses were considered present if any were observed after examination of 50 HPF.21 (link), 30 (link)
Publication 2014
Carcinoma Carcinoma, Small Cell Cell Nucleolus Cell Nucleus Chromatin Cytokeratin Cytoplasm Eosin Fibrosis Head and Neck Neoplasms Keratinocyte Lanugo Lung Cancer Lymphocyte Microscopy Mitosis Nasopharyngeal Carcinoma Necrosis Neoplasms Nuclear Inclusion Pathologists Patients Pleura Squamous Cell Carcinoma Squamous Epithelial Cells

Most recents protocols related to «Nasopharyngeal Carcinoma»

A total of 2622 patients with 4 types of cancer were included in this study (Tables 1 and 2). For simplification, OC is denoted by 3: nasopharyngeal carcinoma (NPC), OC, and hypopharyngeal cancer (HC). Secondary data came from the registration cancer center of Chi-Mei Medical Center in Taiwan with complete variable assessment evaluated by professional staff clerks in the years between 2007 and 2020; see Supplemental Digital Content S1, Supplemental Digital Content, http://links.lww.com/MD/I599.
Next, 1064 patients with complete BMI records (i.e., treatment in hospital and 1 year after discharge from hospital) in DCNS were extracted. All missing data were filled out with further discussion by the study team with proper judgment.
This study was approved and monitored by the institutional review board (11108-011) of Chi-Mei Medical Center. All patient identifiers were stripped before conducting this study.
Publication 2023
Ethics Committees, Research Hospital Administration Hypopharyngeal Cancer Malignant Neoplasms Nasopharyngeal Carcinoma Patient Discharge Patients
Using FindVariable features from Seurat, 2000 highly variable genes (HVG) were generated, and these genes were employed in principal component analysis (PCA) with parameter NPCS = 30. The Harmony program (version 0.1.0) was used to eliminate probable batches from samples with the parameter NPCA = 12 based on the PCA results. FindClusters from Seurat are then used to identify cell clusters using a shared nearest-neighbor graph. Seurat's RunTSNE and RunUMAP are used to reduce the harmony dimension of visualization by T-distributed random neighborhood embedding (tSNE) and unified manifold approximation and projection (UMAP).
Publication 2023
Cells Genes Nasopharyngeal Carcinoma
Ethical approval was obtained from the institutional review board for this retrospective analysis. This study comprised an evaluation of the institutional database for medical records between January 2005 and December 2016 to identify patients with brain necrosis after radiotherapy for NPC. A total of 66 NPC patients with RN were enrolled in this study, according to the following inclusion criteria: (a) underwent radiotherapy at least 12 months before the administration of intravenous methylprednisolone; (b) received high-dose or low-dose intravenous methylprednisolone treatment and no bevacizumab has been administrated before (Additional file 1: Appendix A1); and (c) performed pre- and post-treatment magnetic resonance imagings (MRI) of the brain and with measurable lesions in the MRI. The exclusion criteria were as follows: NPC relapse or metastases, surgical brain lesion resection, other tumor diseases, or other diseases of the nervous system. The patient selection process is presented in Fig. 1.

Study flowchart of cohort selection. Abbreviations: NPC = Nasopharyngeal Carcinoma; MRI = Magnetic Resonance Imaging

Demographic and pretreatment clinical characteristics before methylprednisolone administration were derived from medical records, including age, gender, duration between radiotherapy and RN diagnosis (DBRN), duration between radiotherapy and methylprednisolone treatment (DBRM), duration between RN diagnosis and methylprednisolone treatment (DBNM), aspartate transaminase (AST), alanine transaminase (ALT), high-sensitivity C-reaction protein levels (Hs-CRP), the maximum radiation dose of the nasopharynx (Dmax of the GTVnx), the maximum radiation dose of the neck (Dmax of the GTVnd), radiotherapy methods, Montreal Cognitive Assessment score (MoCA), the Late Effects of Normal Tissue (LENT)/Subjective, Objective, Management, Analytic (SOMA) scale score (LENT-SOMA), the volume of brain necrosis, side of the lesions and steroid dose. Tumor staging was performed on the basis of the American Joint Committee on Cancer TNM Staging System Manual, 7th Edition [25 (link)]. The RN volume was detected using T2-weighted fluid-attenuated inversion recovery (FLAIR) images 3 days before methylprednisolone administration (F0) and at 3 months (F1) of follow up. A reduction in RN volume of more than 25% at F1 compared with F0 was defined as effective response [18 (link)].
Publication 2023
Alanine Transaminase Bevacizumab Brain C Reactive Protein Diagnosis Diagnostic Imaging Ethics Committees, Research Gender Intravenous Infusion Inversion, Chromosome Joints Magnetic Resonance Imaging Malignant Neoplasms Methylprednisolone Nasopharyngeal Carcinoma Nasopharynx Neck Necrosis Neoplasm Metastasis Neoplasms Nervous System Disorder Nuclear Magnetic Resonance Operative Surgical Procedures Patients Radiotherapy Relapse Steroids Tissues Transaminase, Serum Glutamic-Oxaloacetic
Human gastric carcinoma HGC-27 cells, human gastric carcinoma BGC-823 cells, human gastric carcinoma NCI-N87 cells, human breast cancer MDA-MB-231 cells, human hepatocellular carcinoma HepG2 cells, human colon cancer HCT-116 cells, human cervical cancer Ca Ski cells, human pancreatic cancer PANC-1 cell, human lung cancer A549 cells, human nasopharyngeal carcinoma CNE-2 cells, human gastric epithelial GES-1 cells, and Madin–Darby canine kidney MDCK cells were purchased from the cell bank of the Shanghai Institute for Biological Sciences, Chinese Academy of Sciences (Shanghai, China) and maintained in RPMI-1640 (Gibco BRL Life Technologies, Grand Island, NY, USA) or DMEM (Gibco BRL Life Technologies, Grand Island, NY, USA) culture medium supplemented with suitable fetal bovine serum (FBS, Zhejiang Tianhang Biological Technology Co., Ltd., Hangzhou, Zhejiang, China) at 37 °C with 5% CO2 in a humidified incubator.
Publication 2023
A549 Cells Biopharmaceuticals Breast Carcinoma Cancer of Colon Carcinoma Cells Cervical Cancer Chinese Culture Media Epithelial Cells Gastric Cancer HCT116 Cells Hepatocellular Carcinomas Hep G2 Cells Homo sapiens Lung Cancer Madin Darby Canine Kidney Cells Malignant Neoplasms MDA-MB-231 Cells Nasopharyngeal Carcinoma Pancreatic Carcinoma Stomach
We compared the trends of NPC burden in China from 1990 to 2019 through the data of incidence, deaths, and DALYs of different sex. To show the time trends more clearly, we used the joinpoint regression method, which can easily evaluate trends in the estimated annual percentage change. In the joinpoint regression model, all possible joinpoint points were established by searching, and the corresponding error sum of squares and mean square error in each possible case were calculated. The grid points with the smallest MSE were selected as joinpoint points, and piecewise regression was established according to the selected connection points and interval function fitting equation parameters according to the time characteristics of disease distribution. Under the condition of Poisson distribution, the software uses the rate to fit the log-linear model. The annual percent change (APC) was calculated by this model to examine the changes in ASIR, ASDR, and age-standardized DALY rate. Furthermore, the direction and magnitude of change were also determined by calculating the average APC (AAPC) and corresponding 95% confidence intervals (Cis).
We performed a descriptive analysis of temporal and age trends in risk factors for nasopharyngeal carcinoma in China. GBD 2019 reports the effects of smoking, occupational exposure to formaldehyde, and alcohol consumption on ASDR and age-standardized DALY rates for the disease in China. Therefore, we analyzed temporal trends in the contribution of these four risk factors from 1990 to 2019. In China, smoking and alcohol use were more closely linked to the ASDR and age-standardized DALYs of NPC than occupational exposure to formaldehyde. Therefore, in 2019, our focus was on the age difference between these two risk factors.
Age effect is the change associated with physiological and social processes to an individual’s aging. The period effect is the result of external factors affecting all age groups equally at a particular time. The cohort effect is the change caused by a unique experience over time. These three effects are an obvious collinearity. Age-period-cohort (APC) models fit the effects of age, period, and cohort as factors, and have always been used to find statistics on the rate information of death or incidence of a disease. Based on age-period-cohort analyses, we evaluated the effects of age, period, and birth cohort on time trends, splitting the temporal variations into the 3 components. Firstly, we divided the data into 10 age groups (50–54, 55–59, 60–64, 65–69, 70–74, 75–79, 80–84, 85–89, 90–94, 95+ years). Then, in the whole observation period, we divided the period into 6 groups (1990–1994, 1995–1999, 2000–2004, 2005–2009, 2010–2014 and 2015–2019). Finally, 15 birth cohorts (1892–1896, 1897–1901, …, 1957–1961, 1962–1966) were obtained by age and period. We estimated age, period, and cohort effects using the natural logarithm of disease incidence as the dependent variable and the median of these datasets as the independent variable, respectively.
Based on Bayesian age-period-cohort (APC) models, dividing the population group into 10 age groups (50–54, 55–59, …, 85–89, 90–94, 95+ years), we predicted the nasopharyngeal carcinoma incidence rate in China from 2020 to 2049 in different age groups.
Publication 2023
Age Groups Birth Cohort Familial Adenomatous Polyposis, Attenuated Formaldehyde Exposure Nasopharyngeal Carcinoma physiology Population Group Sex Characteristics

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More about "Nasopharyngeal Carcinoma"

Nasopharyngeal carcinoma, also known as NPC, is a rare type of head and neck cancer that originates in the nasopharynx, the upper part of the throat behind the nose.
This malignant neoplasm arises from the epithelial cells lining the nasopharynx.
While uncommon, it is the most prevalent form of head and neck cancer in certain regions, particularly Southeast Asia.
Nasopharyngeal carcinoma is strongly associated with Epstein-Barr virus (EBV) infection, and it can present with nonspecific symptoms like nasal congestion, hearing loss, and headaches.
Early diagnosis and appropriate treatment are crucial for improving patient outcomes.
Treatment options may include radiation therapy, chemotherapy, and targeted therapies.
In research settings, various cell culture media like RPMI 1640, DMEM, and Keratinocyte serum-free medium are commonly used to cultivate nasopharyngeal carcinoma cell lines.
Antibiotics like Penicillin and Streptomycin are often added to the culture media to prevent bacterial contamination.
Techniques like Lipofectamine 2000 transfection and TRIzol reagent extraction are employed to manipulate and analyze these cells.
Optimizing research protocols and identifying the best products for nasopharyngeal carcinoma studies can be a challenge.
PubCompare.ai, the leading AI-driven platform, can help researchers locate relevant protocols from the literature, preprints, and patents, and leverage AI-driven comparisons to identify the most effective approaches.
This can enhance the reproducibility and accuracy of your nasopharyngeal carcinoma research.