We performed a retrospective review of all KTR who underwent dd-cfDNA testing (Chronix Biomedical, Göttingen, Germany) for clinical care between April 2020 and April 2021 at our institution. Indications for dd-cfDNA testing were previously diagnosed or suspected rejection, otherwise worsening kidney function, or a change of immunosuppressive regimen, among others. For patients with worsening kidney function or suspected rejection, measurements were performed at least once, and follow-up measurements were performed as indicated by the treating clinician. For patients who underwent a change of immunosuppressive regimen, measurements were performed 4 times (baseline and after 1, 3, and 6 mo). An abnormal dd-cfDNA result was defined as a value of >0.5% or >50 copies/mL, respectively.
10 (link) All patients with at least 1 test showing a discrepancy between the relative and absolute quantifications of dd-cfDNA were included in the case series.
Donor characteristics evaluated included age, sex, and living versus deceased donation. Recipient characteristics evaluated included age, sex, cause of chronic kidney failure, type of dialysis, duration of dialysis, induction immunosuppressive regimen, early graft function, and time since transplantation. Delayed graft function was defined as the need for dialysis within 7 d after transplantation. Recipient serum creatinine, microalbuminuria, kidney biopsy results, dd-cfDNA levels, presence of donor-specific anti-HLA antibodies (DSA), and major clinical events after transplantation were examined and included in a comprehensive graphical case description for each patient. For illustration, red-shaded areas representing absolute dd-cfDNA and red lines representing relative dd-cfDNA were included in the graphs. Absolute and relative dd-cfDNA and total cfDNA, as well as the corresponding reference ranges, are provided in Table S1 (SDC,
http://links.lww.com/TXD/A375).
The measurement of dd-cfDNA was performed as described previously.
10 (link),14 (link) In brief, for each patient, 4 informative single nucleotide polymorphisms (SNPs), defined as an SNP for which the recipient has a homozygous allelic state and the graft carries at least 1 heterozygous allele, were selected from a predefined set of 40 SNPs. These 4 SNPs were used to quantify the dd-cfDNA (%) concentration, defined as donor alleles/(donor alleles + recipient alleles). Results for SNPs with heterozygous graft genotypes were corrected by a factor 2. Total cfDNA was extracted from up to 8 mL of plasma collected in certified blood collection tubes (Streck Corp, Omaha, Nebraska). The concentration was determined using droplet-digital PCR and was corrected for extraction loss and cfDNA fragmentation, as described previously.
10 (link) The absolute concentration of dd-cfDNA per mL of plasma was calculated by multiplying total cfDNA (copies/mL) and dd-cfDNA (%). Reference ranges for total cfDNA in the posttransplant course were assessed in a cohort of 300 KTR, as described previously.
13 (link)The institutional review board of the ethics committee of Charité-Universitätsmedizin Berlin, Germany, approved the study (approval number EA2/144/20), and all procedures were in accordance with the 1964 Helsinki declaration and its later amendments or comparable ethical standards. Written informed consent was obtained from all patients.
Osmanodja B., Akifova A., Budde K., Choi M., Oellerich M., Schütz E, & Beck J. (2021). Absolute or Relative Quantification of Donor-derived Cell-free DNA in Kidney Transplant Recipients: Case Series. Transplantation Direct, 7(11), e778.