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Rappaport

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Publication 2016
Adult Aged Asian Persons Childbirth Friend Minority Groups Rappaport SRR protein, human TimeLine Walkers Woman Young Adult
For quantitative bacteriology, 1 g of pig feces was combined with 5 ml PBS, vortexed, and 0.1 ml directly plated to XLT-4 medium (Beckton, Dickinson and Co., Sparks, MD, USA) containing 30 μg/ml of nalidixic acid. For tissue samples, 1 g of each tissue was combined with 2 ml of PBS in a whirlpak bag, pounded with a mallet, and homogenized in a Stomacher (Seward, Westbury, NY, USA) for 1 min. One hundred microliters of the resulting solution was aliquoted onto XLT-4 medium containing nalidixic acid. One hundred microliters of a 10-fold dilution of each fecal and tissue sample was also plated, and additional dilutions were performed when CFU reached >300/plate. Following 48 h of incubation at 37°C, black colonies were enumerated and a single colony from each plate was confirmed to be Salmonella by serogroup antiserum agglutination (Beckton, Dickinson and Co., Sparks, MD, USA). The total number of CFU for each quantitative tissue or fecal sample was calculated per gram of sample by obtaining the number of Salmonella per plate and multiplying by the dilution factor.
Qualitative bacteriology of Salmonella was performed as follows: 1 g (fecal) or 0.1 ml (homogenized tissue) samples were inoculated in 10 ml tetrathionate broth (TET; VWR, Rutherford, NJ, USA) for 48 h of growth at 37°C. Following incubation, 0.1 ml of each culture was transferred to 10 ml Rappaport–Vassiliadis medium (RV; Difco) and incubated at 37°C for 18–20 h. Cultures were streaked on XLT-4 medium containing nalidixic acid. Colonies suspicious for Salmonella were confirmed by serogroup antiserum agglutination.
Statistical analysis for Salmonella shedding in feces (CFU/g) was Log10-transformed and analyzed using a mixed linear model for repeated measures (Proc Mixed in SAS for Windows, version 9.2; SAS Institute Inc., Cary, NC, USA). Covariance structures within pigs across time were tested and modeled using the REPEATED statement to determine the optimal covariance structure. Linear combinations of the least-squares mean estimates were used in a priori contrasts after testing for a significant (P < 0.05) treatment group effect. Comparisons were made between each group at each time point, using a 5% level of significance (P < 0.05) to assess statistical differences. The endpoint data for bacterial colonization (CFU/g) of tissues collected at necropsy were Log10-transformed and analyzed by analysis of variance using a general linear model for unbalanced data. A 5% level of significance (P < 0.05) was used to assess statistical differences.
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Publication 2016
Agglutination Autopsy Bacteria Contrast Media Feces Immune Sera Nalidixic Acid Pigs Rappaport Salmonella Technique, Dilution Tissues
In each experiment, 30 chicken carcasses prior to inside outside wash step were collected from a processing plant in large sterile bags. Chickens were weighed and the deep muscle breast temperature was recorded within 20 min of arrival in the laboratory. Individual carcasses were subsequently placed in a whirl pack bag (ThermoFisher Scientific, Scoresby, Australia) and washed with massaging for 2 min in 200 mL buffered peptone water (BPW; ThermoScientific, Oxoid, Scoresby, Australia). Two mL of the BPW wash were spread plated onto five modified charcoal-cefoperazone-deoxycholate agar (mCCDA) (ThermoScientific, Scoresby, Australia) plates (400 µL per plate) and incubated at 42 °C with 10% CO2 for 48 hours to assess direct Campylobacter spp. counts. From the initial 200 mL BPW wash, 40 mL was incubated overnight at 37 °C. Then, 100 µL of the incubated BPW was transferred into 10 mL Rappaport Vassiliadis soya peptone broth (RVS, ThermoScientific, Oxoid, Scoresby, Australia) and incubated overnight at 42 °C for selective growth of Salmonella enterica serovars. A loop-full of the RVS broth was streaked on to xylose lysine deoxycholate agar (XLD; ThermoScientific, Oxoid, Australia) plates. Suspected Salmonella colonies were subcultured onto Brilliance Salmonella agar (ThermoScientific Oxoid, Scoresby Australia) for confirmation. To quantify the total viable counts (TVC) in the carcass wash, the carcass wash was diluted 10-fold and plated on nutrient agar. The limit of detection for TVC was 0.25 colony forming units (CFU)/cm2 of chicken carcass. The plates were incubated overnight at 37 °C and colonies were recorded in colony forming units (CFU). For Campylobacter spp. the limit of detection was 10 CFU/mL of rinsate.
Following the initial BPW wash, 5 carcasses each were placed into six different treatment groups, water and sanitizer wash each at 5 °C, 15 °C, and 22 °C (Table 1). Carcasses were placed into large containers filled with diluted sanitizer and agitated continuously for the entire treatment period (Table 1). Carcasses were then removed and placed in a sterile bag and rinsed as with BPW. The miniaturized Most Probable Number (MPN) method described by [20 (link)], was used to determine the Salmonella load in culture-positive samples. Campylobacter and Salmonella counts as well as the TVC were interpreted per square centimeter of carcass as per the Australian standard [21 ]. Briefly, surface area of a whole chicken carcass in square centimeters was calculated by the following formula, 0.87 m + 635 (m = total mass in grams) and the microorganisms per square centimeter of surface area from the rinse fluid was calculated using the following formula,

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Publication 2019
A-Loop Agar Breast Campylobacter Cefoperazone Charcoal Chickens Deoxycholate Lysine Muscle Tissue Nutrients Peptones Plants Rappaport Salmonella Salmonella enterica Soybeans Sterility, Reproductive Xylose
Trajectories of 2D semiflexible filaments were generated using a walk of constant step size δ. An angle θ between the displacement vectors of successive steps was chosen from a Gaussian distribution centered at θ = 0 and variance σθ. The variance and the step size determine the persistence length of the filament. Expanding Eq. 16 and 19 for small θ and Δs, respectively, one has 1 −〈θ2〉/2 ≂ 1 −δ/2lp. Thus, the persistence length is [Rappaport et al., 2008 ]:
lp=δσθ2.
The statistics of the resulting angular distributions are identical to those of a 2D WLC down to the level of a single step of the walk. Images were generated by convoluting the trajectory of the walk with a Gaussian kernel.
Simulated images of filaments in 3D were generated similarly to 2D. The angle θ between successive displacement vectors was drawn from the distribution θexp(θ22σθ2) [Rappaport et al., 2008 ], with θ positive or negative. The torsional angle ϕ describing the rotation of the plane defined by two successive steps was chosen from a Gaussian distribution centered at ϕ = 0 with variance σϕ. Expanding Eq. 16 and 19, one has 1 −〈θ2〉/2 ≂ 1 −δ/lp. Using θ2=2σθ2 , we find:
lp=δσθ2;lτ=δσϕ2.
The second of Eq. 26 follows similarly from Eq. (17) and (20). The generated trajectories obey the statistics of Eq. 18 down to a single step of the walk. Images were generated by convoluting the trajectory of the walk with a Gaussian which is 3 times wider along the direction in between z-slices, mimicking an experimental point spread function (PSF) of a confocal microscope.
Publication 2010
Cloning Vectors Cytoskeletal Filaments Microscopy, Confocal Rappaport

Campylobacter-free Ross broiler chickens were used to determine the colonisation of different Campylobacter strains in the presence and absence of bacteriophage. To ensure that the experimental birds remained free of naturally occurring infection, faeces and cloacal swabs were taken each day from hatch and tested for Campylobacter by direct plating on CCDA agar and for Salmonella by enrichment in Rappaport–Vassiliadis soya peptone broth (Oxoid), then plating on xylose-lysine desoxycholoate agar (Oxoid). Birds were dosed with Campylobacter at 21 d of age and with bacteriophage where applicable at 25 d of age. Following sacrifice, the ceca, upper (proximal small intestine) and lower intestines of the birds were first separated by ligature and then removed by sterile dissection. The lumenal contents were collected for Campylobacter and bacteriophage isolation as described previously [32 (link)].
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Publication 2007
Agar Aves Bacteriophages Campylobacter Cecum Chickens Dissection Enterobacter Feces Infection Intestines Intestines, Small isolation Ligature Lysine Peptones Rappaport Salmonella Soybeans Sterility, Reproductive Strains Xylose

Most recents protocols related to «Rappaport»

To address the research purpose, the investigators designed and implemented a retrospective cohort study including patients admitted under the diagnosis of AC according to the International Diagnostic Code (ICD)-10 and treated at a tertiary referral center in the period from January 2010 to December 2019. A diagnosis of AM by an otologist was made if otalgia, fever, signs of AOM, and retro-auricular redness and swelling were noted. Data were retrieved from computer databases and were retrospectively analyzed. The study was approved by the Ethics Committee of Bruce Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa (number 0014/21), and written informed consent was obtained from all the participants. The patients' families were subsequently contacted for any missing details. Cases with incomplete records or lost to follow-up for a minimum period of 3 months were excluded. The study design is displayed in Figure 1.
Study variables were grouped into logical sets and included demographics, ethnicity, laterality, and prior treatment and its duration. During hospital admission, body temperature measurements and its patterns, upper respiratory tract infection symptoms, general weakness, presence of central nervous system involvement, description of tympanic membrane, and middle ear and mastoid status were observed. Additionally, laboratory parameters including complete blood count and C-reactive protein (CRP) values, blood/middle-ear, or mastoid bacterial cultures along with presence and type of surgical intervention were monitored. The initial survival follow-up point was the patient’s hospital admission, and the endpoint was status at discharge from the hospital, with the length of treatment coded as an outcome variable. Surgical outcomes entailed the need for mastoidectomy with paracentesis and insertion of the ventilating tube, extracranial intratemporal and intracranial complications, hospitalization length, and cases of complicated mastoiditis.
Publication 2023
Bacteria Blood Blood Proteins Central Nervous System Debility Diagnosis Earache Erythema Ethics Committees Ethnicity Faculty, Medical Fever Functional Laterality Hospitalization Mastoidectomy Mastoiditis Measure, Body Middle Ear Operative Surgical Procedures Otologists Paracentesis Patient Admission Patient Discharge Patients Process, Mastoid Rappaport Tympanic Membrane Upper Respiratory Infections
The techniques used to isolate and identify Salmonella were recommended by the International Organization for Standardization (ISO-6579, 2002) and the World Health Organization [27 ]. Global foodborne infections network (formerly WHO global Salmonella Surveillance) [27 ]. In a nonselective liquid medium (buffered peptone water (BPW) (Oxoid CM509, Basingstoke, England), a 10 ml milk sample was mixed with 90 ml of pre-enrichment, and the sample mixture was thoroughly shaken before being incubated at 37°C for 24 hours. Following incubation, the culture was mixed, and a portion (0.1 ml) was transferred to a tube containing 10 ml of selective enrichment liquid medium (Rappaport Vassiliadis (RV)) broth and incubated at 41.5°C for 24 hours. A 10 µl of loop full inoculum from selective enrichment media was streaked onto Xylose Lysine Deoxycholate (XLD) (Oxoid CM0469, Basingstoke, England) agar and Salmonella Shigella (SS) agar plates prepared on petri-dishes and incubated at 37 ± 1°C for 24 ± 3 hours. After proper incubation, the plates were examined for the presence of typical Salmonella colonies. The typical colonies of Salmonella grown on Xylose Lysine Deoxycholate agar medium produce black centers with distinct red colonies due to the color change of phenol red in medium and colorless transparent colonies on Salmonella Shigella agar. The presumptive Salmonella colonies on the XLD (Oxoid CM0469, Basingstoke, England) and SS agar medium were transferred onto the surface of predried nutrient agar plates in a manner that allow isolated colonies to develop and incubated at 37°C for 24 hours in further confirmation with biochemical tests. Thus, all suspected Salmonella colonies were picked from the nutrient agar and inoculated into the biochemical test including Triple Sugar Iron (TSI) agar (Oxoid CM0277, Basingstoke, England) for the TSI test, Simmons's Citrate agar (Oxoid CM53, Basingstoke, England) for the citrate utilization test, Tryptone Soya Broth (Becton Dickinson, USA) for the indole test and Methyl red-Voges Proskauer (MR-VP) (Micromaster Thane, India) for methyl red and Voges Proskauer test and incubated for 24 or 48 hours at 37°C. Colonies producing an alkaline (red) slant, with acid (yellow) but on TSI with blackening or hydrogen sulfide production, negative for Tryptophan utilization on indole test (yellow-brown ring), positive for Methyl red (produce red color on the surface of medium), negative for Voges–Proskauer (yellow color), and positive for Citrate utilization (deep blue slant) were consider to be Salmonella positive [28 (link), 29 ].
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Publication 2023
Acids Agar Citrates Deoxycholate Hydrogen Sulfide Hyperostosis, Diffuse Idiopathic Skeletal indole Infection Iron Iron Sucrose Lysine Milk, Cow's Nutrients Peptones Rappaport Salmonella Shigella Soybeans Sugars Tryptophan Xylose
A 25 g of dried beef meat powder was mixed with 225 mL of buffered peptone water (Oxoid, UK) with a nonselective enrichment followed by serial dilutions using 9 mL of 1% buffered peptone water and normal saline water. Total coliform and fecal coliform counts were conducted using pour plate method, whereby 1 mL of each serial dilution was pipetted into a Petri dish and then mixed with a 5 mL of tryptone soya agar; the agar with 10-15 mL of violet-red bile lactose agar (VRBLA) (Oxoid, UK) was covered. For the total coliform count, the plates were incubated at a temperature of 37.0°C and for fecal coliform incubated at 44.0°C for the duration of 24 ± 2 hours. For the presumptive coliform and fecal coliform, approximately 1 mm diameter size colonies with pink color were counted. Confirmatory tests were done by taking five representative colonies and inoculating to brilliant green bile broth and Escherichia coli (E. coli) broth, respectively, for coliform and fecal coliform count. E. coli count was conducted after fecal coliform count was made using E. coli broth and nutrient broth according to [35 (link)].
Aerobic mesophilic count was determined using a pour plate method, kept at 30°C for 48 hours. Sample of buffered peptone water (BPW); then, serial dilutions were made; plates were put at 30°C for 72 hours [36 ]. Colonies were counted in each of the Petri dishes with a count between 30 and 300 colony-forming units (cfu). Salmonella was detected according to the method described by [37 (link)]. Samples were nonselectively enriched in buffered peptone water (BPW). After 24-hour growth at 36±10c, selectively enriched using selenite cysteine broth and rappaport vassiliadis enrichment broths, then incubated at 35±10c. After purification and biochemical identification, qualitative results were presented as present and absent. Mold and yeast counts were performed by spread plate techniques; 0.1 mL of the respective diluted sample was added to prepare rose bengal agar supplemented with chloramphenicol. Samples were spread using a spreader after being incubated at 22°C for 5-7 days according to the method described for total mold and yeast counts (cfu/g) [38 ]. Microbial load of MP was checked after completing the process of slicing, air-drying, and making the dried meat into powder form. The same process was followed for a standard diet, except slicing which does not need standard feed. Final microbial analysis was done to estimate the degree of microbial contamination at the final product after many traditional meat powder preparation processes as similar steps as food preparation at household level aimed to sprinkle the MP in complementary foods of children in the future.
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Publication 2023
Agar Bacteria, Aerobic Beef Bile brilliant green Child Chloramphenicol Cysteine Diet Escherichia coli Feces Food Fungus, Filamentous Households Hyperostosis, Diffuse Idiopathic Skeletal Lactose Meat Meat Products Normal Saline Nutrients Peptones Powder Rappaport Rose Bengal Salmonella Selenite Soybeans Technique, Dilution Viola Yeast, Dried
Salmonella spp. isolation was carried out, as previously described, with few modifications [27 (link)]. Briefly, 1 mL from each kind of sample (A, B, C) was inoculated into 9 mL of Buffered Peptone Water (BPW) (Thermo Fisher Diagnostics, Milan, Italy) and incubated at 37 °C for 24 h. From BPW, 1 ml and 0.1 mL were subcultured in 10 mL of Selenite broth (Biolife, Milan, Italy) and 10 mL of Rappaport-Vassiliadis (RV) broth (Biolife, Milan, Italy), respectively. Selenite broth was incubated at 37 °C, whereas RV broth was incubated at 41.5 °C. After 24 h of incubation, a loopful from each broth was streaked on Brilliant Green Agar (Biolife) and Salmonella-Shigella Agar (Biolife) plates; plates were incubated at 37 °C for 24 h. Suspected colonies were evaluated with conventional biochemical tests (Triple Sugar Iron Agar, urease, ONPG, lysin decarboxylase, indole, VP, malonate) and were confirmed as Salmonella spp. by detection of invA gene [28 ]. Isolates belonging to the Salmonella genus were serotyped according to the Kaufmann–White Salmonella serotyping scheme with commercial antisera (Statens Serum Institut, Copenhagen, Denmark). All identified strains were cultured in BHI and frozen at −80 °C by the addition of 20% glycerol.
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Publication 2023
2-nitrophenylgalactoside, (beta-D)-isomer Agar brilliant green Carbohydrates Carboxy-Lyases Diagnosis Freezing Genes Glycerin Immune Sera indole Iron isolation lysin, gastropoda malonate Peptones Rappaport Salmonella Selenite Serum Shigella Strains Urease
Salmonella was isolated following a previous method [19 ] with some modifications. In brief, aseptically, 25 g of each catfish and tilapia sample and 50 g of each shrimp sample were added to 225 mL and 450 mL of sterile lactose broth (Becton Dickinson Diagnostic Systems, Sparks, MD, USA), respectively, stomached for 2 min and incubated for 24 ± 2 h at 35 °C. For the second enrichment, 10 mL of Rappaport-Vassiliadis broth (RV) (Becton Dickinson Diagnostic Systems, Sparks, MD, USA) was inoculated with 1 mL of the previously incubated lactose broth mixture and incubated at 35 °C for 24 h. Enriched samples were streaked onto Xylose Lysine Trigitol 4 (XLT4) (Becton Dickinson Diagnostic Systems, Sparks, MD, USA) agar plates. Five colonies with typical Salmonella phenotypes (black colonies) were confirmed by BAX-PCR assay for Salmonella.
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Publication 2023
Agar Biological Assay Diagnosis Lactose Lysine Phenotype Rappaport Salmonella Siluriformes Sterility, Reproductive Tilapia Xylose

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Buffered peptone water is a general-purpose microbiological culture medium used for the enrichment and recovery of a wide range of microorganisms. It provides a buffered environment and peptone as a source of nutrients to support the growth of microbes.
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Rappaport-Vassiliadis broth is a microbiological culture medium used for the selective isolation and enrichment of Salmonella species. It is formulated to support the growth of Salmonella while inhibiting the growth of other bacteria.
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The BPW is a laboratory equipment product manufactured by BD. It is designed to perform core functions related to biological and chemical analysis. The details of its specific features and applications are not available for inclusion in an unbiased and factual description.
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Brilliant green agar is a selective and differential culture medium used for the isolation and differentiation of Salmonella species from clinical and food samples. It contains brilliant green and bile salts that inhibit the growth of Gram-positive bacteria and most Gram-negative bacteria, while allowing the growth of Salmonella. Salmonella colonies appear pink to red on this medium.
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The API 20E system is a standardized identification system for Enterobacteriaceae and other non-fastidious Gram-negative rods. It consists of a plastic strip with 20 microtubes containing dehydrated biochemical test substrates. The organism is inoculated into the strip, and the reactions that occur during the incubation period are used to identify the bacterial species.
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The API 20E is a standardized identification system for Enterobacteriaceae and other non-fastidious Gram-negative rods. It consists of 20 miniaturized biochemical tests, which allow the identification of the most frequently encountered members of the Enterobacteriaceae family as well as certain other Gram-negative bacteria.
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Buffered peptone water is a microbiological culture medium used for the enrichment and cultivation of a wide range of bacteria. It provides a buffered, nutrient-rich environment to support the growth of various bacterial species. The core function of buffered peptone water is to facilitate the isolation and identification of bacteria from different samples.
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Xylose lysine deoxycholate agar is a selective and differential culture medium used for the isolation and identification of Salmonella and Shigella species from clinical and food samples. It contains xylose, lysine, and deoxycholate as the key components to inhibit the growth of gram-positive bacteria and coliforms while allowing the growth of target organisms.

More about "Rappaport"

Rappaport is an innovative AI-driven platform that helps researchers optimize their research protocols for enhanced reproducibility and accuracy.
This easy-to-use tool utilizes advanced AI comparisons to locate the most reliable and effective research protocols from a vast pool of literature, preprints, and patents.
By providing researchers with a concise, informative overview of available protocols, Rappaport empowers them to make informed decisions and improve the quality and impact of their studies.
Researchers can leverage Rappaport's capabilities to streamline their workflow and ensure their studies are backed by the most robust and reliable methods.
The platform's AI-driven comparisons can assist in identifying the optimal protocols, whether researchers are working with Buffered peptone water, Rappaport-Vassiliadis broth, Brilliant green agar, the API 20E system, or other common laboratory techniques like DMEM and Penicillin/streptomycin.
By utilizing Rappaport, researchers can enhance the reproducibility and accuracy of their findings, ultimately leading to more impactful and influential research.
The platform's intuitive interface and comprehensive protocol overviews make it easier for researchers to navigate the vast landscape of available methods, reducing the time and effort required to identify the most suitable approaches.
Whether you're working with Xylose lysine deoxycholate agar or exploring new frontiers in your field, Rappaport can be a valuable tool in your research arsenal, helping you optimize your protocols and elevate the quality and impact of your work.