A single aliquot of the mock community was used throughout the sequencing effort analyzed in this study. This mock community represented 21 strains distributed among members of the Bacteria (n = 20) and Archaea (n = 1). Among the 20 bacterial sequences, there were 6 phyla, 10 classes, 12 orders, and 18 families and genera. The aliquot of mock community DNA was prepared by mixing genomic DNA from Acinetobacter baumanii (NC_009085), Actinomyces odontolyticus (DS264586), Bacillus cereus (AE017194), Bacteroides vulgatus (NC_009614), Clostridium beijerinckii (NC_009617), Deinococcus radiodurans (NC_001263), Enterococcus faecalis (NC_004668), Escherichia coli (NC_000913), Helicobacter pylori (NC_000915), Lactobacillus gasseri (NC_008530), Listeria monocytogenes (NC_003210), Neisseria meningitidis (NC_003112), Propionibacterium acnes (NC_006085), Pseudomonas aeruginosa (NC_002516), Rhodobacter sphaeroides (NC_007493, NC_007494), Staphylococcus aureus (NC_007793), Staphylococcus epidermidis (NC_004461), Streptococcus agalactiae (NC_004116), Streptococcus mutans (NC_004350), Streptococcus pneumoniae (NC_003028), and Methanobrevibacter smithii (NC_009515). Given the low homology between the three PCR primer pairs and the M. smithii 16S rRNA gene sequence, these sequences were rarely observed and have been omitted from the analysis of this study. The proportions of genomic DNAs added were calculated to have an equal number of 16S rRNA genes represented for each species; however, the original investigators did not verify the final relative abundances.
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Staphylococcus epidermidis
Staphylococcus epidermidis
Staphylococcus epidermidis: A Ubiquitous Skin Commensal with Untapped Research Potential.
This Gram-positive bacterium is a common inhabitant of human skin and mucous membranes, playing a crucial role in maintaining a healthy microbiome.
Leveraging PubCompare.ai's innovative AI-driven platform, researchers can optimize their investigations into this versatilie organism, accessing the best protocols from literature, preprints, and patents to enhance reproducibility and accuracy.
Discver how PubCompare.ai can streamline your Staphylococcus epidermidis research journey, delivering seamless, data-driven insights to advance this field of study.
This Gram-positive bacterium is a common inhabitant of human skin and mucous membranes, playing a crucial role in maintaining a healthy microbiome.
Leveraging PubCompare.ai's innovative AI-driven platform, researchers can optimize their investigations into this versatilie organism, accessing the best protocols from literature, preprints, and patents to enhance reproducibility and accuracy.
Discver how PubCompare.ai can streamline your Staphylococcus epidermidis research journey, delivering seamless, data-driven insights to advance this field of study.
Most cited protocols related to «Staphylococcus epidermidis»
Acinetobacter
Archaea
Bacillus cereus
Bacteria
Bacteroides vulgatus
Clostridium beijerinckii
Deinococcus radiodurans
DNA
Enterococcus faecalis
Escherichia coli
Genes
Genome
Helicobacter pylori
Lactobacillus gasseri
Listeria monocytogenes
Methanobrevibacter
Neisseria meningitidis
Oligonucleotide Primers
Propionibacterium acnes
Pseudomonas aeruginosa
Rhodobacter sphaeroides
Ribosomal RNA Genes
RNA, Ribosomal, 16S
Schaalia odontolytica
Staphylococcus aureus
Staphylococcus epidermidis
Strains
Streptococcus agalactiae
Streptococcus mutans
Streptococcus pneumoniae
For all data sets, we removed all sequences that contained one or more ambiguous bases (Ns), that did not have an exact match to the expected bar-coded forward primers, or that had an average quality score less than 30 (the V6 region is short and generally low in homopolymer stretches and therefore has high average quality scores) (Sogin et al., 2006 (link); Huse et al., 2007 (link); Kunin et al., 2010 (link)). For V6 data sets, we also removed sequences that did not have a recognizable reverse primer sequence.
For non-environmental data sets, we compared all reads to a database of 16S rRNA sequences using GAST (Huse et al., 2008 (link)). Reads that had a best match to a non-target sequence that was at least 10% better than the match to the nearest template sequence were considered to be contamination and were removed. Reads that either did not have any match or did not have a match over at least 80% of their length were considered to represent non-target amplification, chimeras or reads with gross errors and were removed. These sequences were compared with the GenBank nt database using BLASTN (Altschul et al., 1990 (link)).
The likelihood of generating chimeras between short, hypervariable rRNA sequences of divergent taxa in the absence of the conserved regions of the gene is very small. The E. coli and S. epidermidis data sets, however, each include two very similar sequences in high density. Chimeras here are very similar to the correct sequences and map to the same species; therefore they are not identified by the minimumblast alignment requirement nor by standard chimera checking software, and would artificially increase the calculated error rate of PCR+pyrosequencing. Through visual examination we identified obvious chimeras and removed those specific sequences from the data. Some additional chimeras that contain sequencing errors and therefore do not exactly match predicted chimeras likely remain.
For non-environmental data sets, we compared all reads to a database of 16S rRNA sequences using GAST (Huse et al., 2008 (link)). Reads that had a best match to a non-target sequence that was at least 10% better than the match to the nearest template sequence were considered to be contamination and were removed. Reads that either did not have any match or did not have a match over at least 80% of their length were considered to represent non-target amplification, chimeras or reads with gross errors and were removed. These sequences were compared with the GenBank nt database using BLASTN (Altschul et al., 1990 (link)).
The likelihood of generating chimeras between short, hypervariable rRNA sequences of divergent taxa in the absence of the conserved regions of the gene is very small. The E. coli and S. epidermidis data sets, however, each include two very similar sequences in high density. Chimeras here are very similar to the correct sequences and map to the same species; therefore they are not identified by the minimum
Chimera
Escherichia coli
Genes
Oligonucleotide Primers
Ribosomal RNA
RNA, Ribosomal, 16S
Staphylococcus epidermidis
We inoculated 5 ml of filter-sterilized nutrient broth with a single colony of E. coli K12 ATCC 10798 or S. epidermidis ATCC 14990, and grew these cultures overnight at 37°C to an OD600 of ∼1 [nutrient broth is 8 g Difco nutrient broth powder (Invitrogen) in Milli-Q+ ultrapure water (Millipore) to 1 l; all loops, pipets, flasks, etc. were disposable sterile polycarbonate or polypropylene]. For each species, we inoculated three 250 ml flasks, each containing 50 ml nutrient broth, with 100 µl of the overnight culture. We incubated the flasks at 37°C with vigorous shaking and harvested the cultures at late stationary phase (OD600 of ∼1.25). We then divided each culture into three aliquots, extracted genomic DNA and used each DNA extraction in a separate amplification of the V6 region. We split one amplicon library from each species into two emPCR amplification prior to pyrosequencing for a total of 10 subsamples of single clones of E. coli and of S. epidermidis. We also generated an amplicon library from a previously prepared pool of plasmid DNA from 43 different cloned 16S rRNA genes from deep-sea vent organisms (Huse et al., 2007 (link); Huber et al., 2009 (link)).
We generated amplicon libraries using primer pools designed to span the V6 or V4-V5 hypervariable regions of as many known bacteria or archaea as possible (Tables S5 and S6 ). We used Invitrogen Platinum HiFi Taq polymerase for amplification, as we have found that the fidelity of standard Taq is insufficient for the level of deep sequencing provided by the GS FLX. We sequenced from the A adapter on a Roche GS FLX using standard Roche protocols and supplies and the amplicon base-calling pipeline. Sequences are available at the NCBI Short Read Archive (SRP001610).
Data from environmental samples were collected as previously described (Sogin et al., 2006 (link); Huber et al., 2007 (link); Gilbert et al., 2009 (link); Turnbaugh et al., 2009 (link); McLellan et al., 2010 (link)) using the amplification and processing methods outlined above.
We generated amplicon libraries using primer pools designed to span the V6 or V4-V5 hypervariable regions of as many known bacteria or archaea as possible (
Data from environmental samples were collected as previously described (Sogin et al., 2006 (link); Huber et al., 2007 (link); Gilbert et al., 2009 (link); Turnbaugh et al., 2009 (link); McLellan et al., 2010 (link)) using the amplification and processing methods outlined above.
Archaea
Bacteria
DNA Library
Escherichia coli
Escherichia coli K12
Genes
Genome
Hydrothermal Vents
Nutrients
Oligonucleotide Primers
Plasmids
Platinum
polycarbonate
Polypropylenes
Powder
RNA, Ribosomal, 16S
Staphylococcus epidermidis
Sterility, Reproductive
Taq Polymerase
The following bacterial species were used: Bacillus subtilis (ATCC 10707), Enterobacter cloacae (human isolate), Escherichia coli (ATCC 0157:H7), Micrococcus flavus (ATCC 9341),Proteus mirabilis (human isolate), Pseudomonas aeruginosa (ATCC 27853), Salmonella enteritidis (ATCC 13076), S. epidermidis (ATCC 12228) S. typhimurium (ATCC 13311) Staphylococcus aureus (ATCC 25923). The antibacterial assays were carried out by the disc-diffusion [25 (link)] and microdilution method [26 ,27 (link),28 (link)] in order to determine the antibacterial activity of oils and their components against the human pathogenic bacteria. The bacterial suspensions were adjusted with sterile saline to a concentration of 1.0 × 105 CFU/mL. The inocula were prepared daily and stored at +4 °C until use. Dilutions of the inocula were cultured on solid medium to verify the absence of contamination and to check the validity of the inoculum.
Anti-Bacterial Agents
Bacillus subtilis
Bacteria
Biological Assay
Culture Media
Diffusion
Enterobacter cloacae
Escherichia coli
Homo sapiens
Micrococcus flavus
Oils
Pathogenicity
Proteus mirabilis
Pseudomonas aeruginosa
Saline Solution
Salmonella enteritidis
Staphylococcus aureus
Staphylococcus epidermidis
Sterility, Reproductive
Technique, Dilution
Sterilized titanium (Ti6Al4V) and steel (AIS1316-L) discs were colonized by 1 of 4 different bacterial strains (Figure 1 ). All strains were clinical isolates from patients with chronic PJI. The bacterial strains were identified to the species level by biotyping and/or standard microbiological procedures: Staphylococcus aureus (coagulase-positive, nuc-positive staphylococcus), Staphylococcus epidermidis (ID-32 STAPH; bioMèrièux, Marcy l'Etoile, France; profile: 166010210), Enterococcus faecalis (rapid ID 32 STREP; bioMèrièux; profile: 30721715171), and Propionibacterium acnes (rapid ID 32A; bioMèrièux; profile: 2503377604).
Confocal scanning laser microscopy (CSLM) was employed to confirm the 24-hour biofilm formation ability of each strain. 8 study groups were examined (Table 1 ). Bacteria were suspended in 25 mL of Mueller Hinton broth (BD, Franklin Lakes, NJ) and incubated at 35ºC until a spectrophotometric density of approximately 1 × 108 colony forming units/mL (CFU/mL) had been reached in the exponential growth phase. A batch of 40 discs (one study group) was immersed in this bacterial suspension bath and incubated at 35ºC for 24 h on a gently stirring agitator (20 rpm).
To remove non-adherent bacteria, the discs were rinsed 6 times in sterile saline. First, the discs for each study group were placed in a sterile plastic tube (Sarstedt, Norway) containing 25 mL saline and gently vortex mixed (MS2 Minishaker; IKA Works Inc., Wilmington, NC) at 100 rpm for 10 seconds. The discs were then transferred to another tube, and the procedure was repeated twice. Each single disc was then transferred to a sterile glass test tube containing 5 mL saline and subjected to vortex mixing at 100 rpm. The single disc rinsing was also repeated 3 times.
Aliquots of 50 µL saline were incubated on agar (Merck, Darmstadt, Germany) with 5% ox blood at 35ºC for 3 days. For culture of P. acnes, FAA agar (Merck) was incubated in an anaerobic cabinet for 7 days. The bacteria cultured were enumerated by colony counting. The number of CFU after final rinsing was recorded as a quantitative baseline, facilitating evaluation of the different detachment methods.
Each experimental group (10 discs) was subjected to 1 of 4 methods for biofilm detachment and bacterial recovery. The experimental design is summarized inTable 1 .
Confocal scanning laser microscopy (CSLM) was employed to confirm the 24-hour biofilm formation ability of each strain. 8 study groups were examined (
To remove non-adherent bacteria, the discs were rinsed 6 times in sterile saline. First, the discs for each study group were placed in a sterile plastic tube (Sarstedt, Norway) containing 25 mL saline and gently vortex mixed (MS2 Minishaker; IKA Works Inc., Wilmington, NC) at 100 rpm for 10 seconds. The discs were then transferred to another tube, and the procedure was repeated twice. Each single disc was then transferred to a sterile glass test tube containing 5 mL saline and subjected to vortex mixing at 100 rpm. The single disc rinsing was also repeated 3 times.
Aliquots of 50 µL saline were incubated on agar (Merck, Darmstadt, Germany) with 5% ox blood at 35ºC for 3 days. For culture of P. acnes, FAA agar (Merck) was incubated in an anaerobic cabinet for 7 days. The bacteria cultured were enumerated by colony counting. The number of CFU after final rinsing was recorded as a quantitative baseline, facilitating evaluation of the different detachment methods.
Each experimental group (10 discs) was subjected to 1 of 4 methods for biofilm detachment and bacterial recovery. The experimental design is summarized in
Acne
Agar
Bacteria
Bath
Biofilms
Blood
Coagulase
Enterococcus faecalis
Microbiological Techniques
Microscopy, Confocal, Laser Scanning
Neoplasm Metastasis
Patients
Propionibacterium acnes
Saline Solution
Spectrophotometry
Staphylococcal Infections
Staphylococcus
Staphylococcus aureus
Staphylococcus epidermidis
Steel
Sterility, Reproductive
Strains
Streptococcal Infections
Titanium
titanium alloy (TiAl6V4)
Most recents protocols related to «Staphylococcus epidermidis»
Example 4
Detection of MRSA was tested in a model of co-infection with excess methicillin-resistant Staphylococcus epidermidis (MRSE). In the specific model tested, MRSA (GP1822) was present at 10′ CFU/mL, either alone (MRSA Control); with MRSE at 106 CFU/mL (MRSA_MRSE 1e6); or with MRSE at 107 CFU/mL (MRSA_MRSE 1e7) (
Biological Assay
Coinfection
Methicillin-Resistant
Methicillin-Resistant Staphylococcus aureus
Staphylococcus epidermidis
Vision
TBLASTN 2.11.0+ [74 (link)] was used to compare TnaA [E. coli], TrpA [E. coli], TrpB [E. coli],TDC [Staphylococcus epidermidis], DDC [Bacillus licheniformis], IpdC [Azospirillum], AofH [Bacillus subtilis], and AldA [E. coli] protein sequences to publicly available sequenced bacterial genomes for isolates GNE6609, GNE6603, GNE6686, and GNE6624 (Genbank: GCF_000011065.1, GCF_900106755.1, GCA_000177015.3, and GCA_003202955.1). Searches yielding high-scoring segment pairs (HSPs) satisfying e value ≤ 0.1 and query coverage ≥ 60% were considered putative evidence of the presence of the query protein in the target genome.
Amino Acid Sequence
Azospirillum
Bacillus licheniformis
Bacillus subtilis
Escherichia coli
Genome
Genome, Bacterial
Proteins
Staphylococcus epidermidis
Primary normal human epidermal keratinocytes were cultured at 37°C in 5% CO2 in Epilife medium supplemented with human keratinocyte growth supplement (Gibco, USA). Human microvascular endothelial cells (HMVECs) were cultured at 37°C in 5% CO2 in EBM-2 basal medium supplemented with EBM-2 growth medium (Lonza, USA).
M. furfur (ATCC 12078) was cultured at 30°C on Difco YM agar supplemented with 1% olive oil. S. epidermidis (Staphylococcus epidermidis, ATCC 12228) was cultured at 37°C on Difco tryptic soy agar. C. acnes (Cutibacterium acnes, ATCC 6919) was cultured at 37°C on forced clostridial medium (CM0149; Oxoid) with 2% agar. To induce hypoxia, a BD GasPakTM EZ Pouch was used. All the media were sterilized by autoclaving at 121°C for 15 min.
Organisms were harvested by centrifugation, and the pellet was suspended in the corresponding media. The organisms were heat-killed by incubation at 80°C for 3 min, and then co-cultured with normal human epidermal keratinocytes or human microvascular endothelial cells for 24 h at a density of 1 × 105 cells/mL. To induce allergic environments, recombinant thymic stromal lymphopoietin (TSLP) (50 ng/mL) or IL-4 (50 ng/mL) was used.
M. furfur (ATCC 12078) was cultured at 30°C on Difco YM agar supplemented with 1% olive oil. S. epidermidis (Staphylococcus epidermidis, ATCC 12228) was cultured at 37°C on Difco tryptic soy agar. C. acnes (Cutibacterium acnes, ATCC 6919) was cultured at 37°C on forced clostridial medium (CM0149; Oxoid) with 2% agar. To induce hypoxia, a BD GasPakTM EZ Pouch was used. All the media were sterilized by autoclaving at 121°C for 15 min.
Organisms were harvested by centrifugation, and the pellet was suspended in the corresponding media. The organisms were heat-killed by incubation at 80°C for 3 min, and then co-cultured with normal human epidermal keratinocytes or human microvascular endothelial cells for 24 h at a density of 1 × 105 cells/mL. To induce allergic environments, recombinant thymic stromal lymphopoietin (TSLP) (50 ng/mL) or IL-4 (50 ng/mL) was used.
Acne
Agar
Centrifugation
Clostridium
Endothelial Cells
Epidermis
Homo sapiens
Hypoxia
Keratinocyte
Oil, Olive
Propionibacterium acnes
Staphylococcus epidermidis
Thymic Stromal Lymphopoietin
Trypsin
A 222 nm‐KrCl excimer lamp, emitting primarily at 222 nm, was used for laboratory testing for susceptibility. The lamp was operated with an optical bandpass filter to reduce the nonpeak emissions (Buonanno et al., 2021 (link)) and was used as a light source in laboratory experiments to assess the effectiveness of far‐UVC light to inactivate two of the most relevant Staphylococcus species identified as S. hominis and S. epidermidis. The three S. hominis isolates used for testing susceptibility to 222 nm‐far‐UVC were M1018, M1020, and M1022; and the two S. epidermidis isolates were A#2 and A#4; all of them isolated on February 24, 2022. Modified from Burlage (1998 ), chosen isolates were grown overnight in 50 mL Trypticase Soy Broth (TSB) in a shaker at 37°C/140 rpm. Then, 400 μL from this overnight culture were inoculated into 50 mL of fresh TSB, and cells were regrown to mid‐exponential phase for approximately 2.5–3 h until the absorption at 600 nm was verified to be between 0.3 and 0.4 using an Eppendorf Biophotometer D30. The cells were pelleted by centrifugation at 2103g for 8 min then resuspended to the same volume in phosphate‐buffered saline (PBS). Cells were centrifugated to a pellet again and resuspended again in 50 mL of PBS. A volume of 2 mL of this cell suspension was spread in a 4 cm diameter Petri dish swirling gently to cover the bottom of the plate. Dishes were exposed using the filtered excimer lamp at a distance of 20 cm. The irradiance at this distance was measured at 120 µW/cm2 using a Hamamatsu C9536 UV power meter with an H9535‐222 sensor head (Hamamatsu Corporation). Radiant exposure doses of 2, 10, or 20 mJ/cm2 were administered using respective exposure times of 17 s, 1 min 23 s, or 2 min 47 s. Plates were prepared in triplicate for each irradiation, and control plates remained unirradiated. Serial dilutions were prepared and 100 μL were spread onto TSA plates, incubated at 37°C in the dark, and colony forming units (CFUs) were counted after 48 h.
Cells
Centrifugation
Head
Hyperostosis, Diffuse Idiopathic Skeletal
Light
Phosphates
Radiotherapy
Saline Solution
Staphylococcus
Staphylococcus epidermidis
Susceptibility, Disease
Technique, Dilution
trypticase-soy broth
In total, 68 S. epidermidis isolates were included: 4 from the patient and 64 from a strain collection comprising S. epidermidis isolated from PJIs (hip or knee) between 2007 and 2018 in Region Örebro, Sweden. No clinical data were available for the isolates from this strain collection. Species were confirmed by MALDI-TOF MS. For isolates displaying phenotypical heterogeneity during growth on dalbavancin-containing agar, MALDI-TOF MS was repeated after subculturing to exclude contamination. All isolates were stored at −80°C in preservation medium (trypticase soy broth; BD Diagnostic Systems, Sparks, MD, USA) supplemented with 0.3% yeast extract (BD Diagnostic Systems) and 29% horse serum (SVA, Uppsala, Sweden) at the Department of Laboratory Medicine, Clinical Microbiology, Örebro University Hospital, Sweden.
For antibiotic susceptibility testing, isolates were subcultured on Mueller–Hinton II agar 3.8% w/v plates (BD Diagnostic Systems) at 36°C. The MICs for dalbavancin and vancomycin were determined on 0.5 McFarland bacterial suspension in 0.85% (w/v) NaCl on Mueller–Hinton II agar plates with gradient strips (Liofilchem, Roseto degli Abruzzi, Italy; and Etest, bioMérieux, Marcy l’Etoile, France, respectively) incubated for 20 h at 35°C. The DAL0.125 method, a modification of the VAN4 method,20 (link) was developed to screen for S. epidermidis isolates with reduced susceptibility to dalbavancin. Briefly, 10 μL of a 0.5 McFarland bacterial suspension was pipetted on four agar plates containing different antibiotic concentrations (0.064 mg/L, 0.125 mg/L, 0.25 mg/L and 0.5 mg/L). Isolates were incubated at 35°C, and subsequently evaluated according to a protocol of ‘no growth’, ‘growth’ and ‘confluent growth’ at 24 and 48 h. When phenotypical heterogeneity was detected during growth on dalbavancin-containing agar (n = 16), the species was confirmed to be S. epidermidis with MALDI-TOF MS, and isolates were subcultured and re-evaluated by MIC gradient strip test.
For antibiotic susceptibility testing, isolates were subcultured on Mueller–Hinton II agar 3.8% w/v plates (BD Diagnostic Systems) at 36°C. The MICs for dalbavancin and vancomycin were determined on 0.5 McFarland bacterial suspension in 0.85% (w/v) NaCl on Mueller–Hinton II agar plates with gradient strips (Liofilchem, Roseto degli Abruzzi, Italy; and Etest, bioMérieux, Marcy l’Etoile, France, respectively) incubated for 20 h at 35°C. The DAL0.125 method, a modification of the VAN4 method,20 (link) was developed to screen for S. epidermidis isolates with reduced susceptibility to dalbavancin. Briefly, 10 μL of a 0.5 McFarland bacterial suspension was pipetted on four agar plates containing different antibiotic concentrations (0.064 mg/L, 0.125 mg/L, 0.25 mg/L and 0.5 mg/L). Isolates were incubated at 35°C, and subsequently evaluated according to a protocol of ‘no growth’, ‘growth’ and ‘confluent growth’ at 24 and 48 h. When phenotypical heterogeneity was detected during growth on dalbavancin-containing agar (n = 16), the species was confirmed to be S. epidermidis with MALDI-TOF MS, and isolates were subcultured and re-evaluated by MIC gradient strip test.
Agar
Antibiotics
Bacteria
Biologic Preservation
dalbavancin
Diagnosis
Epsilometer Test
Equus caballus
Genetic Heterogeneity
Juvenile polyposis syndrome
Knee
Patients
Pharmaceutical Preparations
Serum
Sodium Chloride
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Staphylococcus epidermidis
Strains
Susceptibility, Disease
trypticase-soy broth
Vancomycin
Yeast, Dried
Top products related to «Staphylococcus epidermidis»
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Staphylococcus epidermidis is a type of bacteria commonly found on the human skin and mucous membranes. It is a Gram-positive, coagulase-negative, and non-spore-forming coccus. Staphylococcus epidermidis is a prevalent microorganism and is often used in research and laboratory settings for various applications.
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Staphylococcus aureus is a bacterial strain available in the American Type Culture Collection (ATCC) product portfolio. It is a Gram-positive, spherical-shaped bacterium commonly found in the human nasal passages and on the skin. This strain is widely used in research and laboratory settings for various applications.
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Pseudomonas aeruginosa is a bacterial strain available from the American Type Culture Collection (ATCC). It is a Gram-negative, aerobic bacterium commonly found in soil and water environments. This strain can be used for various research and testing purposes.
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Escherichia coli is a bacterium that is commonly used in laboratory settings. It serves as a model organism for microbiology and molecular biology research. Escherichia coli can be cultivated and studied to understand fundamental cellular processes and mechanisms.
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Enterococcus faecalis is a Gram-positive, facultatively anaerobic bacterium. It is commonly found in the human gastrointestinal tract and is known for its ability to survive in diverse environments.
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Bacillus subtilis is a Gram-positive, rod-shaped bacterium commonly found in soil and the gastrointestinal tract of humans and animals. It is a widely used laboratory strain for research and industrial applications.
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Klebsiella pneumoniae is a Gram-negative, non-spore-forming, encapsulated, lactose-fermenting, facultatively anaerobic, rod-shaped bacterium. It is a common inhabitant of the human gastrointestinal tract and can cause various types of infections, including pneumonia, urinary tract infections, and septicemia.
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Candida albicans is a species of yeast that is commonly found in the human microbiome. It is a versatile and well-studied organism used in a variety of laboratory applications, including microbiology, immunology, and biochemistry research.
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Bacillus cereus is a Gram-positive, spore-forming bacterium that is commonly found in the environment. It is a type of microorganism that can be used in various laboratory applications.
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S. epidermidis is a reference strain of the bacterial species Staphylococcus epidermidis. It is a non-pathogenic, coagulase-negative Staphylococcus species commonly found on human skin and mucous membranes. This strain is widely used in research and development applications.
More about "Staphylococcus epidermidis"
Staphylococcus epidermidis, a ubiquitous Gram-positive bacterium, is a common inhabitant of human skin and mucous membranes, playing a crucial role in maintaining a healthy microbiome.
This versatile organism, also known as CoNS (Coagulase-Negative Staphylococcus), has untapped research potential that can be explored with the help of innovative AI-driven platforms like PubCompare.ai.
Compared to its more well-known counterpart, Staphylococcus aureus, S. epidermidis is generally considered less pathogenic.
However, it can still cause opportunistic infections, particularly in immunocompromised individuals or those with indwelling medical devices.
Other common skin and mucous membrane bacteria include Pseudomonas aeruginosa, Escherichia coli, Enterococcus faecalis, Bacillus subtilis, Klebsiella pneumoniae, and Candida albicans.
By utilizing PubCompare.ai's cutting-edge technology, researchers can optimize their investigations into S. epidermidis, accessing the best protocols from literature, preprints, and patents to enhance reproducibility and accuracy.
This can lead to a deeper understanding of the role S. epidermidis plays in the human microbiome, its interactions with other commensal and pathogenic bacteria, and its potential clinical applications, such as in the development of probiotics or antimicrobial strategies.
Discover how PubCompare.ai can streamline your Staphylococcus epidermidis research journey, delivering seamless, data-driven insights to advance this field of study and unlock new possibilities in the realm of human health and the microbiome.
This versatile organism, also known as CoNS (Coagulase-Negative Staphylococcus), has untapped research potential that can be explored with the help of innovative AI-driven platforms like PubCompare.ai.
Compared to its more well-known counterpart, Staphylococcus aureus, S. epidermidis is generally considered less pathogenic.
However, it can still cause opportunistic infections, particularly in immunocompromised individuals or those with indwelling medical devices.
Other common skin and mucous membrane bacteria include Pseudomonas aeruginosa, Escherichia coli, Enterococcus faecalis, Bacillus subtilis, Klebsiella pneumoniae, and Candida albicans.
By utilizing PubCompare.ai's cutting-edge technology, researchers can optimize their investigations into S. epidermidis, accessing the best protocols from literature, preprints, and patents to enhance reproducibility and accuracy.
This can lead to a deeper understanding of the role S. epidermidis plays in the human microbiome, its interactions with other commensal and pathogenic bacteria, and its potential clinical applications, such as in the development of probiotics or antimicrobial strategies.
Discover how PubCompare.ai can streamline your Staphylococcus epidermidis research journey, delivering seamless, data-driven insights to advance this field of study and unlock new possibilities in the realm of human health and the microbiome.