The largest database of trusted experimental protocols
> Living Beings > Plant > Cedrus

Cedrus

Cedrus is a powerful, AI-driven platform developed by PubCompare.ai that unlocks the potential of reproducibility in scientific research.
This innovative tool effortlessly locates protocols from literature, pre-prints, and patents, while leveraging intelligent comparisons to identify the optimal solutions for your research endeavors.
By elevating your work with Cedrus's cutting-edge features, you can revolutionze your scientific journey and achieve new heights of discovery.

Most cited protocols related to «Cedrus»

Protocol full text hidden due to copyright restrictions

Open the protocol to access the free full text link

Publication 2010
Acoustics Attention Blinking Cedrus Electromyography Extinction, Psychological Fear Larynx Oculomotor Muscles Reflex, Startle Reinforcement, Psychological Response Elements Wounds and Injuries
The Fish-Shark go/no-go task was administered on an IBM-compatible computer using E-Prime 1.2 (Psychological Software Tools, Pittsburgh, PA). Children used one button on an RB-530 button box (Cedrus Corporation, San Pedro, CA) to respond. Before beginning the task, children were instructed to press the button when they saw a fish, to catch it in their fishing net, but that they should not press the button when they saw a shark, because sharks would break through their net. In an initial training phase, children were presented with all fish and shark stimuli, and practiced pressing the button to catch fish and withholding the button press to avoid catching sharks. Finally, 40 test trials were administered (75% fish trials, 25% shark trials). On each trial, the stimulus (fish or shark) appeared on the screen for 1500 milliseconds or until the child pressed the button. On fish trials when the child correctly pressed the button, a picture of the fish caught in a net appeared on the screen for 1000 milliseconds, accompanied by a bubbling sound, indicating that the child “caught the fish.” On shark trials when the child erroneously pressed the button, a picture of the shark breaking through a net appeared, accompanied by the sound of a buzzer. No feedback was presented when the child did not press the button. There was a 1000 millisecond inter-stimulus interval between end of the previous trial stimulus or feedback and the onset of the next trial stimulus. Trials were block-randomized so that each block of eight trials included six fish trials and two shark trials (where one shark trial followed two fish, and the other shark trial followed four fish, in a manipulation of preceding trial context), and all exemplars (10 fish, three sharks) appeared with roughly equivalent frequency. Trials with responses faster than 200 milliseconds were eliminated from the analysis, as they were too quick to reflect responding to the current stimulus. Proportion correct was computed separately for go and no-go trials, and mean response times (RTs) were calculated for correct go trials. The proportion of hits (correct go trials) and false alarms (incorrect no-go trials) were used to calculate sensitivity (d′; the standardized difference between the hit rate and the false alarm rate, calculated by subtracting the z-score value of the hit rate right-tail p-value from the z-score value of the false alarm rate right-tail p-value; Macmillan & Creelman, 2005 ). The d′ sensitivity index is used routinely in the signal detection literature and reflects the degree to which a subject responds differentially to two classes of stimuli, where higher values reflect better discrimination.
Publication 2012
Cedrus Child Discrimination, Psychology Fishes Hypersensitivity Sharks Signal Detection (Psychology) Sound Tail
The Psychophysics Toolbox (Brainard, 1997 (link)) running on MATLAB 8.4 was used for stimulus presentation, and a RB-540 Cedrus button box was used to capture responses.
Electrocardiogram (ECG) was measured using two amplified adhesive Ag/AgCl EEG electrodes in a modified Lead II Einthoven configuration: one positioned under the right clavicle and one above the left side of the third rib, as well as two implicit reference electrodes positioned underneath the left clavicle. These electrodes interfaced with a BioSemi ActiveTwo system running ActiView acquisition software, and recorded at a sampling rate of 512 Hz. Data were recorded for the entirety of the experimental session (approximately 1 h).
Full text: Click here
Publication 2017
Cedrus Clavicle Electrocardiogram

Protocol full text hidden due to copyright restrictions

Open the protocol to access the free full text link

Publication 2013
Adult Cedrus Child Extinction, Psychological Fear Larynx Neoplasm Metastasis Obstetric Delivery Population Group Sound Wounds and Injuries
The present methodology allowed us to assess baseline acoustic startle as well as the acquisition, within-session extinction, and spontaneous recovery of fear-potentiated startle. The startle probe (noise burst) was a 108-dB [A], 40-ms burst of broadband noise with a near instantaneous rise time. The aversive stimulus (US) in these studies was a 250-ms airblast with an intensity of 140 psi directed to the larynx similar to that used in previously published methods (Jovanovic et al., 2005 (link); Norrholm et al., 2006 (link)). The airblasts were emitted by a compressed air tank connected to polyethylene tubing and controlled by a solenoid switch. The CSs were colored lights with color assignment counterbalanced across subjects.
For reinforced trials (A+ in both sets of experiments), a colored light was illuminated for a total of 4,995 ms. A startle probe (40 ms) was administered 4,000 ms after onset of the light. The airblast US (250 ms duration) was then presented 500 ms after the startle probe. The light terminated 205 ms after offset of the airblast. For nonreinforced trials (A− in the single-cue experiment or B− in the A+/B− experiment), the light was illuminated for a total of 4,245 ms. Again, a startle probe (40 ms) was administered 4,000 ms after onset of the light. The light terminated 205 ms after the startle probe. Startle probes were delivered on every trial as with previous human fear-potentiated startle studies (Ameli, Ip, & Grillon, 2001 (link); Grillon, Baas, Lissek, Smith, & Milstein, 2004 (link); Grillon, Dierker, & Merikangas, 1998 (link); Jovanovic et al., 2005 (link), Jovanovic et al., 2006 (link); Norrholm et al., 2006 (link)).
For both sets of experiments (single cue and differential conditioning, A+/B−), subjects participated in three separate sessions: CS habituation and acquisition (Session 1), extinction training (Session 2), and the extinction test (Session 3). Each startle session began with a 1-min acclimation period consisting of 70-dB broad-band noise, which continued throughout the session as background noise. Initial startle activity was reduced with 3 presentations of the 108-dB 40-ms startle probe without the CS, referred to as noise alone (NA) trials.
Subjects were randomly assigned to one of four experimental conditions: (a) single cue, immediate (10-min) extinction; (b) single cue, delayed (72-hr) extinction; (c) differential conditioning (A+/B−), immediate extinction, or (d) differential conditioning (A+/B−), delayed extinction. During the time period between acquisition and extinction training, subjects in the immediate group were taken out of the sound booth and placed in a quiet room adjacent to the startle testing room. EMG electrodes remained in place in between sessions.
A response keypad (SuperLab, Cedrus Corp.) was used in the startle sessions in coordination with the EMG startle response monitoring system (SR-LAB, San Diego Instruments) to collect trial-by-trial ratings of US expectancy. For each presentation of the CS, subjects indicated on the response keypad whether the light would be reinforced or nonreinforced, and this response was recorded for each light presentation. Subjects pressed a button marked “+” if they expected the CS to be followed by the US (danger), a button marked “+” if they did not expect the CS to be followed by the US (safety), and a button marked “0” if they did not know what to expect (uncertain). For the purposes of data analysis, subject responses of “+” were scored as 1, responses of “0” were scored as 0, and responses of “−” were scored as −1.
Publication 2008
Acclimatization Acoustics Cedrus Extinction, Psychological Fear Homo sapiens Larynx Light MS-245 Polyethylene Reflex, Startle Safety Sound

Most recents protocols related to «Cedrus»

From open-access databases, raw transcriptome data for 15 species were downloaded. Among the species, 12 species belong to 10 genera of Pinaceae, including Abies firma, Cathaya argyrophylla, Cedrus deodara, Keteleeria evelyniana, Larix gmelinii, Picea abies, Picea smithiana, Pinus armandii, Pinus elliottii, Pinus massoniana, Pinus taeda, Pseudolarix amabilis, Pseudotsuga menziesii, Tsuga dumosa and Tsuga longibracteata, and the three species Cycas panzhihuaensis, Araucaria cunninghamii, and Platycladus orientalis were used as outgroups (Supplementary Table S1).
Full text: Click here
Publication 2023
Abies Araucaria Cedrus Cycas Fir, Douglas Larix Picea Pinaceae Pinus Pinus abies Pinus taeda Thuja orientalis Transcriptome Tsuga
This study was carried out in the mountain range of Talassemtane and in Jebel Tazaot (both included in Talassemtane National Park). The range occupied by this fir in Talassemtane (TA) is around 3760 ha, while the range of Tazaot (TZ) extends over approximately 300 ha, where fir grows mostly on northern slope [45 ,46 ,47 (link)].
A. marocana is a monoecious or sub-dioecious conifer that grows between 1500 and 2000 m a.s.l. [12 (link)] in mountains near the coast, where annual rainfall fairly exceeds 1000 mm, and is a drought-sensitive species [13 (link),14 (link),15 (link),16 (link)]. In the lower elevation limits of dense A. marocana forests, the vegetation is Mediterranean, dominated by Quercus rotundifolia Lam. (holm oak), Quercus faginea Lam. (gall oak), Pinus pinaster Ait. (Maritime pine), and Pinus halepensis Mill. (Aleppo pine) forests. Upslope, A. marocana is the dominant tree to roughly 1700 m, where it grows with other relict trees, such as Acer granatense Boiss. (Spanish Maple), Taxus baccata L. (yew), Cedrus atlantica Manetti (Atlas cedar), and Pinus nigra salzmannii (Dunal) Franco (Laricio pine).
The Moroccan fir is endemic and relict, limited to the Rif mountains of North Morocco; this fir is included in the IUCN Red List of Threatened Species as endangered species [48 (link)], and one of the most serious hazards for its survival is climate change. Soils are usually shallow, rocky, and developed on limestone.
The mean temperature range in the study area goes from 12 to 14 °C, with a maximum of 33 °C, and a minimum of 0 °C, reaching −3 °C at high elevation. The mean annual precipitation is above 500 mm and can exceed 2000 mm at high mountain peaks [49 ]. As a whole, the rainfall patterns are distinctly Mediterranean, with approximately 90% of all precipitation falling between October and April, followed by a long summer drought.
Full text: Click here
Publication 2023
Acer Cedrus Climate Change Droughts Endangered Species Forests Hispanic or Latino Limestone Pinus Pinus pinaster Substantia Nigra Threatened Species Tracheophyta Trees
The localizer task consisted of three conditions: a 1-back and a 2-back condition distributed randomly in 10 blocks (five blocks per condition), alternating with baseline blocks. Each block has 15 volumes and 15 digits, with five of them being targets and the remaining 10 non-targets. Each digit was displayed for 400 ms. Each block was preceded by the instruction to remember one or two preceding numbers. This stimulus was created and presented in Presentation® software (Version 20.1, Neurobehavioral Systems, Inc., Berkeley, CA, www.neurobs.com).
Participants were instructed to press a button when the number displayed matches the one from one step earlier in the sequence (1-back condition) or two steps earlier (2-back condition; specific task instructions to participants are described in detail in Supplementary Material). The total length of the run was 10.5 min, and participant responses were recorded through an MR-compatible response box (Cedrus Lumina LSC-400B).
For online ROI definition, we functionally targeted DLPFC using the real-time fMRI software package Turbo-BrainVoyager 3.2 (TBV; Brain Innovation, Maastricht, The Netherlands). Real-time preprocessing included 3D head motion correction (6 degrees of freedom) compared to the first volume. Online statistical analysis of incoming volumes was incremental, using a recursive least squares general linear model (GLM) based on a design matrix automatically created from the imported stimulation protocol and including the convolution of the BOLD time course with a two-gamma hemodynamic response curve (HRF).
Activation clusters were estimated, in a first approach, according to the contrast “2-back” > “baseline” that usually resulted in the highest percent of signal change (PSC). However, in some participants, we found very large clusters of activation in DLPFC (merging with pre-motor areas) with this contrast. In these cases, switching to the “2-back” > “1-back” contrast allowed us to delineate a more circumscribed effort-related cluster, associated with cognitive-load and manipulation, and find a more accurate peak voxel to center the rectangle drawn on multi-slice view of TBV. The defined rectangle extended to the slice above and below (a total of three slices) and the average of significant voxels was displayed in the time-course. We generally considered ROIs appropriate as NF targets, when their PSC was around 1% or more. Anatomical references were also taken into account by an expert neuroradiologist (DP) to determine DLPFC, guaranteeing it was located anterior to the premotor cortex and superior to the planes including the lateral ventricles. All targets were selected on the left hemisphere since participants were performing a verbal working memory task during imagery runs (Emch et al., 2019 (link)).
For the sham feedback group, we selected between 18 and 24 functional voxels of white matter, evenly distributed per hemisphere, in each participant centrum semiovale.
Full text: Click here
Publication 2023
Brain Cedrus Cognition Dorsolateral Prefrontal Cortex Fingers fMRI Gamma Rays Head Hemodynamics Imagery, Guided Memory, Short-Term Motor Cortex One-Step dentin bonding system Premotor Cortex Ventricle, Lateral White Matter
One-year-old rooted cuttings of a Japanese cedar plus-tree clone, Godai1, were planted from March to April 2013 at nurseries in three locations, Yamagata (Higashine City, Yamagata Prefecture, Japan [38°23’53"N, 140°22’47"E]), Ibaraki (Hitachi City, Ibaraki Prefecture, Japan [36°41’28"N, 140°41’21"E]), and Kumamoto (Koshi City, Kumamoto Prefecture, Japan [32°52’53"N, 130°44’5"E]) (Fig 1A). The clone ‘Godai1’ was selected from Kimitsu, Chiba (35°13’12.0"N 140°07’48.0"E) as a first-generation plus tree. We have been studying ‘Godai1’ as a model clone of Japanese cedar [14 (link)], as it shows average growth and high rooting ability for propagation [22 ]. A total of 10, 6, and 8 rooted cuttings were planted at more than 25-cm intervals at the respective sites. No obstacles hindered sunlight from reaching the rooted cuttings at the nurseries at the three sites. Data regarding air temperature and day length at the three sites are shown in Fig 1B and 1C. Yamagata is located in northern Japan, which is a cold region with snow cover in winter; Ibaraki is located along the coast of the Pacific Ocean and has a mild climate; and Kumamoto is located in southern Japan, which has a warm climate. Throughout the year of the study, Kumamoto exhibited the highest mean air temperature and Yamagata the lowest mean air temperature among the three sites. The mean air temperature in Ibaraki was intermediate between that of Yamagata and Kumamoto. In Ibaraki, the temperature in summer (June to September) was similar to that in Yamagata, and the temperature in winter (January to March) was similar to that in Kumamoto.
A 10-cm-long apex portion of sunny upper branches (S1 Fig) was randomly collected each month from two of the planted trees at 10:00-11:00 am from February 2014 to February 2015 (S1 Table). All sampling at the three sites was performed within 7 days. Meteorological data for the sampling days are shown in S2 Table. The height of all cuttings at the three sites was also measured at each sampling time point and other times, and growth rate was calculated by dividing the height growth differential from April 2014 by the initial height in April 2014. The significance of differences in annual growth rate (growth rate from April to December 2014) among the three sites was tested using one-way analysis of variance (ANOVA).
Full text: Click here
Publication 2023
Cedrus Climate Clone Cells Cold Temperature Cryptomeria Fever Japanese neuro-oncological ventral antigen 2, human Snow Sunlight Upper Extremity Wakerobin
The Nback task is a widely used task in fMRI studies for evaluating working memory (Owen et al., 2005 (link)). In this task, for each stimulus in a continuous series, participants indicate whether the item matches a stimulus presented “n” stimuli previously. Our task used letter stimuli presented at two different memory load conditions (1-, 2-back; for details see Livny et al., 2018 (link)). The Nback paradigm was presented using E-prime 2.0 software (Psychology Software Tools, Inc.), back-projected by a radio-frequency shielded projector system and viewed through a mirror device. Responses were recorded using a Lumina response box (Lumina, Cedrus Corporation, CA, USA). Participants were considered to have reached inclusion criterion if their performance was at least 65% correct responses.
Full text: Click here
Publication 2023
Cedrus fMRI Medical Devices Memory, Short-Term Memory Disorders

Top products related to «Cedrus»

Sourced in United States, Canada, Japan
Presentation software is a computer program designed to create and display visual presentations. It allows users to organize and present information, such as text, images, and multimedia, in a structured format. The core function of this software is to facilitate the creation and display of digital slides or pages that can be used for various purposes, including business meetings, educational lectures, and public speaking events.
Sourced in United States, United Kingdom, Germany, Canada, Japan, Sweden, Austria, Morocco, Switzerland, Australia, Belgium, Italy, Netherlands, China, France, Denmark, Norway, Hungary, Malaysia, Israel, Finland, Spain
MATLAB is a high-performance programming language and numerical computing environment used for scientific and engineering calculations, data analysis, and visualization. It provides a comprehensive set of tools for solving complex mathematical and computational problems.
Sourced in Japan
The HP Z200 SFF is a compact desktop workstation designed for professional applications. It features a small form factor and is powered by Intel processors. The Z200 SFF is intended for users who require a powerful yet space-efficient computing solution for their work.
Sourced in United States, Panama
E-Prime 2.0 is a software suite designed for creating and running psychological experiments. It provides a comprehensive set of tools for designing, presenting, and collecting data from a variety of studies. The core function of E-Prime 2.0 is to facilitate the creation and execution of psychological experiments, enabling researchers to collect accurate and reliable data for their research.
Sourced in United States
The Net Amps 300 is a high-density EEG recording system designed for clinical and research applications. It provides 256 or 300 channels of EEG data acquisition and can be used for a variety of neurophysiological studies.
Sourced in United States
The HydroCel Geodesic Sensor Net is a high-density electroencephalography (EEG) recording system. It is designed to provide comprehensive coverage of the scalp for neural data acquisition. The net features a geodesic arrangement of electrodes and utilizes saline-based hydrogel sensors to optimize electrical connectivity with the scalp.
Sourced in United States, United Kingdom, Germany, Morocco, Sweden
MATLAB is a high-performance numerical computing software that provides a powerful programming environment for technical and scientific computing. It is designed to perform matrix and array operations, data analysis, and visualization tasks. MATLAB offers a wide range of built-in functions and toolboxes for various applications, such as signal processing, control systems, and image processing.
Sourced in United States, Japan
Presentation 14.9 is a versatile and compact lab equipment product designed for a variety of applications. It features a core function of presenting and displaying information, data, or multimedia content. The product specifications and technical details are available upon request.
Sourced in United States
The STMISOLA is a low-noise, constant-current stimulator designed for neurophysiology and electrophysiology applications. It provides precise and stable current stimulation to electrodes or tissue preparations. The device offers adjustable current output and advanced safety features to ensure reliable and safe operation.
Sourced in United States
The BIOPAC MP160 system is a comprehensive data acquisition and analysis platform designed for physiological research and clinical applications. It offers high-performance data collection capabilities, supporting a wide range of signal amplifiers and transducers. The system is capable of acquiring and processing multiple channels of physiological data simultaneously.

More about "Cedrus"

Cedrus is a cutting-edge, AI-powered platform developed by PubCompare.ai that revolutionizes the world of scientific research.
This innovative tool seamlessly locates protocols from literature, preprints, and patents, while leveraging intelligent comparisons to identify the optimal solutions for your research endeavors.
Elevate your work with Cedrus's powerful features and unlock new heights of discovery.
Unlock the full potential of reproducibility in your scientific journey with Cedrus.
This AI-driven platform from PubCompare.ai effortlessly locates protocols from a vast array of sources, including literature, preprints, and patents.
Leveraging advanced intelligent comparisons, Cedrus helps you identify the best solutions for your research needs.
Cedrus is designed to work seamlessly with a variety of scientific tools and software, such as Presentation, MATLAB, HP Z200 SFF, E-Prime 2.0, Net Amps 300, HydroCel Geodesic Sensor Net, and BIOPAC MP160 system.
Its cutting-edge features and integrations elevate your work, allowing you to revolutionize your scientific discoveries.
Experience the power of Cedrus and take your research to new heights.
This innovative platform from PubCompare.ai is your key to unlocking the full potential of reproducibility in scientific research.
Effortlessly locate protocols, leverage intelligent comparisons, and elevate your work with Cedrus's user-friendly and SEO-optimized features.