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Wound Healing

Wound Healing: The complex biological process in which the skin, or other tissue, repairs itself after injury.
This process includes, but is not limited to, the formation of new tissue, the closing of the wound, and the restoration of function.
Wound healing research aims to identify optimal protocols and products to accelerate this process and improve patient outcomes.
Utilize AI-powered tools like PubCompare.ai to streamline your wound healing research and discover cutting-edge protocols from the latest literature, preprints, and patents.

Most cited protocols related to «Wound Healing»

A slightly modified version of the InParanoid 4.1 software (4 (link),8 (link)) was used for computing InParanoid 8. The difference is in how the two BLAST (9 (link)) passes are run. In the distributed version 4.1, the two BLAST passes are run after each other—the first run to find all homologs between two species, and then a second run is launched per query sequence to make accurate alignments with only the homologs found in pass 1. We have not yet found a BLAST setting that simultaneously makes accurate alignments and efficiently avoids false low-complexity matches. The default composition-based score adjustment (10 (link)) in BLAST does the latter, and is used in pass 1, but it often truncates the alignments which may cause InParanoid to miss true orthologs (8 (link)), hence it is not used in pass 2.
In order to improve computational throughput, we ran both BLAST passes in parallel and after both were done, extracted matches from pass 2 for homologs found in pass 1; see Figure 1. This can also save total real runtime as only two BLAST runs are launched instead of thousands of tiny runs per species comparison, which causes a lot of input/output (I/O) overhead. There are some drawbacks however: the pass 2 computation and results become much larger, and the infrastructure and work required to synchronize, supervise and load balance the increased number of computational jobs is considerable. We opted for this solution mainly because it offers a higher degree of parallelization.
To speed up the parallel pass 2, the BLAST parameter z (effective database size) was changed from 1 to 5 000 000. This can reduce BLAST's ability to find matches, and it therefore happens at low frequency that homologs found in pass 1 are not reported in the parallel pass 2. To handle this, a quality control and repair step was added where missing pairs were rerun with a normal pass 2. It also catches other problems, such as failed or truncated runs, and repairs them too. Hence the quality control is currently more rigorous for the parallel method than for the serial. The computations were run on a Linux cluster with around 300 8-core nodes, and took in total about 113 core years of which nearly all was spent on running BLAST (blastall 2.2.18). Only about 0.5% of the computation time was spent on running the InParanoid orthology detection algorithm, implemented in Perl. Even though the procedure was modified, the parameters were effectively the same as by default. Compared to the previous release, the number of pairwise species comparisons increased by 650%, from 4950 to 37 128.
Publication 2014
Muscle Rigidity Wound Healing
Chevrel and Rath [3 (link)] proposed a classification for incisional hernias in 2000. This classification is attractive, because it is simple, and the data required to reach the classification are readily obtained. Three parameters were utilised. Firstly, the localisation of the hernia of the abdominal wall: divided into median (M1–M4) and lateral (L1–L4) hernias. Secondly, the size of the hernia: it was postulated that the width of the hernia defect is the most important parameter (greater than hernia defect surface, length of the hernia or size of the hernia sac), which was divided into four groups (W1–W4). As a third parameter of this classification, subgroups were made for incisional hernias and recurrences: the number of previous hernia repairs was recorded as (R0, R1, R2, R3,…). Although apparently easy to use, this classification has not been commonly used in the literature.
In his book on hernia surgery, “Hernien”, Schumpelick described a classification that divided incisional hernias into five classes [2 ]. The size of the defect, the clinical aspect of the hernia in lying and standing position, the localisation of the incision and the number of previous repairs were used for this classification.
Korenkov et al. [4 (link)] reported on the results of an expert meeting on classification and surgical treatment of incisional hernia, but no detailed classification proposal resulted from this meeting.
Ammaturo and Bassi [6 (link)] suggested an additional parameter to the Chevrel classification. The ratio between the anterior abdominal wall surface and the wall defect surface predicts a strong abdominal wall tension when closing the defect, with possible abdominal compartment syndrome development, and thus might influence the choice of surgical technique.
Recently, Dietz et al. [5 (link)] proposed another alternative classification of incisional hernias in which variables like body type, hernia morphology and risk factors for recurrence were included and recommendations made for surgical repair based on the different types. It is based on a self-explanatory taxonomy and is intended to tailor the repair to the body type and risk factors of the individual patient.
The Swedish Abdominal Wall Hernia Registry presented their data collection sheet for incisional and ventral hernias at the EAES congress in Stockholm in June 2008, which forms the basis for a classification and includes many prognostic relevant variables. For this reason Agneta Montgomery was invited to the consensus meeting to present the method of classification used in Sweden.
Publication 2009
Abdominal Compartment Syndrome Experimental Autoimmune Encephalomyelitis Hernia Hernia, Abdominal Herniorrhaphy Incisional Hernia Operative Surgical Procedures Patients Recurrence Somatotype Ventral Hernia Wall, Abdominal Wound Healing
The Perl program “Alu_Mask” was written and used together with REPEATMASKER (http://www.repeatmasker.org/cgi-bin/WEBRepeatMasker) to define Alu elements. The Perl program “RNA_RNA_anneal” was generated to predict intermolecular duplexes between Alu elements within lncRNAs and proven or putative SMD targets. Duplexes were then validated using RNA structure 4.6 (http://rna.urmc.rochester.edu/rnastructure.html), which provides folding free energy changes. Human HeLa or HaCaT cells were transiently transfected with the specified plasmids or siRNAs as described1 (link). For mRNA half-life measurements, HeLa Tet-Off cells (Clontech) were utilized. If formaldehyde-crosslinked, cells were sonicated six times for 30 sec to facilitate lysis, and crosslinks were subsequently reversed by heating at 65°C for 45 min after IP. IP was performed as described1 (link). Protein was purified and Western blotting was performed as noted1 (link). RNA was purified from total, nuclear or cytoplasmic cell fractions or immunoprecipitated from total-cell lysates as reported1 (link). Poly(A)+ RNA was extracted from total-cell RNA using the Oligotex mRNA Mini Kit (Qiagen). RT-sqPCR and RT-qPCR were as described1 (link), except when RT was primed using oligo(dT)18 rather than random hexamers. The RNase protection assay employed the RPA III RNase Protection Assay Kit (Ambion) and uniformly labeled RNA probes that were generated by transcribing linearized pcDNA3.1(+)/Zeo_Chr11_66193000-66191383 in vitro using α-[P32]-UTP (Perkin Elmer) and the MAXIscript Kit (Ambion). Cells were visualized using a Nikon Eclipse TE2000-U inverted fluorescence microscope and, for phase microscopy, a 480-nm excitation spectra. Images were captured utilizing TILLVISION software (TILL Photonics). Scrape injury repair assays were essentially as published21,22. All data derive from at least three independently performed experiments that did not vary by more than the amount shown, and p values for all RT-sqPCR results were <0.05.
Publication 2010
Alu Elements Biological Assay Cells Cytoplasm Endoribonucleases Formaldehyde HaCaT Cells HeLa Cells Homo sapiens Microscopy Microscopy, Fluorescence Oligonucleotides Plasmids Proteins RNA, Long Untranslated RNA, Messenger RNA, Polyadenylated RNA, Small Interfering Wound Healing

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Publication 2013
2-(2-methyl-4-chlorophenylamino)-2-imidazoline Accidents Aged Anemia Antibiotics Aortic Aneurysm, Thoracic Blood Vessel Cardiac Arrest Cardiopulmonary Resuscitation Catheterizations, Cardiac Cerebrovascular Accident Cognition Colon Comatose Congenital Abnormality Deep Vein Thrombosis Disease, Chronic Elective Surgical Procedures Ethics Committees, Research Foot Heart Heart Aneurysm Heart Failure Hemorrhage Infection Inpatient Malnutrition Mental Recall Myocardial Infarction Neoplasm Metastasis Operative Surgical Procedures Patients Pelvic Exenteration Pneumonia Postoperative Complications Pulmonary Embolism Renal Insufficiency Repeat Surgery Respiratory Failure Respiratory Rate Septicemia Serum Albumin Surgery, Day Surgical Procedure, Cardiac Surgical Wound Infection Syndrome Systems, Nervous Thirty Day Readmission Thoracic Surgical Procedures Training Programs Urinary Tract Infection Veterans Volumes, Packed Erythrocyte Wound Healing Wounds
Participants underwent transvaginal surgery for pelvic organ prolapse, including the assigned apical suspension procedure. The SSLF procedure, performed unilaterally, was a modification of the Michigan 4-wall technique.19 (link),20 The ULS procedure, performed bilaterally, was a modification of the technique described by Shull.21 (link) Both apical suspension procedures used two permanent and two delayed absorbable sutures (four sutures total).17 (link) All patients with uterine prolapse underwent vaginal hysterectomy. A concomitant retropubic mid-urethral sling (Tension-Free Vaginal Tape [TVT®]; Ethicon Women’s Health and Urology, Somerville, NJ) was performed for stress urinary incontinence. Other concomitant surgeries were performed at the surgeon’s discretion; biologic or synthetic graft materials were not allowed for the prolapse repairs.
Usual perioperative care included routine perioperative teaching and standardized postoperative instructions. Participants randomized to perioperative BPMT received an individualized program that included one visit 2–4 weeks prior to surgery, and four post-operative visits (2, 4–6, 8, and 12 weeks after surgery).17 (link) (eTable 2) Pelvic floor muscle training, individualized progressive pelvic floor muscle exercise, and education on behavioral strategies to reduce urinary and colorectal symptoms were performed at each visit. Self-reported adherence to BPMT was assessed at 6, 12, and 24 months. All BPMT interventionists attended centralized in-person training prior to the initiation of the study.
Data collection occurred at baseline, during surgery and hospitalization, and at regular intervals up to 24 months postoperatively with Pelvic Organ Prolapse Quantification (POPQ)18 (link) evaluations and symptom assessments occurring at 6, 12 and 24 months. BPMT interventionists were masked to surgical randomization. All outcome assessors were masked to both perioperative BPMT and surgical intervention assignment, including research personnel who conducted vaginal examinations and trained telephone interviewers who administered patient reported outcomes from a centralized facility. Participants were masked to the surgical group assignment, and study surgeons were masked to perioperative BPMT group assignment.
Publication 2014
Biopharmaceuticals Grafts Hospitalization Interviewers Muscle Tissue Operative Surgical Procedures Patients Pelvic Diaphragm Pelvic Organ Prolapse Perioperative Care Prolapse Surgeons Sutures Symptom Assessment Tensionless Vaginal Tape Urinary Stress Incontinence Urine Uterine Prolapse Vaginal Examination Vaginal Hysterectomy Woman Wound Healing

Most recents protocols related to «Wound Healing»

We performed a retrospective cohort review of all adults (aged ≥ 18 yr) who underwent elective AAA repair in Nova Scotia between November 2005 and March 2015. The following databases were linked through the Health Data Nova Scotia service: Discharge Abstract Database (DAD), Medical Service Insurance billing codes, Vital Statistics and Canadian Census information. Health Data Nova Scotia is a platform allowing access to multiple administrative health data sources in the province.26 The DAD is the most comprehensive database for Canadian in-hospital information and contains demographic, administrative and clinical information concerning all inpatient hospital admissions. It contains diagnoses coded as per the International Statistical Classification of Diseases and Related Health Problems, 10th revision (ICD-10).27 Medical Service Insurance provides physician billing information for Nova Scotia. Vital Statistics contains demographic information and underlying cause of death for all fatalities occurring in Canada, coded by ICD-10 codes.28
Cases were identified as elective AAA repairs by means of relevant codes through Medical Service Insurance billing, or admission and surgery for AAA in the DAD. Patients younger than 18 years, those without Nova Scotia residency and those with the diagnosis of ruptured AAA were excluded. In addition, the charts of patients coded as having undergone endovascular aneurysm repair (EVAR) were reviewed to correct potential coding errors.
We obtained relevant baseline characteristics including age, sex, history of hypertension, coronary artery disease, peripheral vascular disease or chronic obstructive pulmonary disease, and prior cerebrovascular accident. The relevant ICD-10 codes are given in Appendix 1, Supplemental Table S1 (available at www.canjsurg.ca/lookup/doi/10.1503/cjs.015321/tab-related-content).
Publication 2023
Adult Cerebrovascular Accident Chronic Obstructive Airway Disease Coronary Artery Disease Diagnosis Endovascular Aneurysm Repair High Blood Pressures Inpatient Insurance, Physician Services Operative Surgical Procedures Patient Discharge Patients Peripheral Vascular Diseases Physicians Residency Wound Healing Youth
The effect of mutation on NS1 structure stability was predicted using FoldX 5.0 (Schymkowitz et al. 2005 (link)). Three types of mutations lists were created from the sequence dataset:
To predict effect of mutations on protein stability, each mutation list was passed to FoldX. It first repairs the reference protein structure, and then calculates energy difference between wild-type and mutated structures (ΔΔG). Calculation was performed in triplicates and mean ΔΔG score was used to classify mutations. Mutations are classified into three categories: stabilizing (ΔΔG < −0.46 kcal), destabilizing (ΔΔG > −0.46 kcal), and neutral (−0.46 kcal/mol < ΔΔG ≤ + 0.46 kcal/mol). For detailed analysis, destabilizing and stabilizing groups were further divided into three subgroups based on ΔΔG scores. Highly stabilizing: ΔΔG < −1.84 kcal/mol, stabilizing: −1.84 kcal/mol ≤ ΔΔG < −0.92 kcal/mol, slightly stabilizing: −0.92 kcal/mol ≤ ΔΔG < −0.46 kcal/mol, slightly destabilizing: + 0.46 kcal/mol < ΔΔG ≤ + 0.92 kcal/mol, Destabilizing: + 0.92 kcal/mol < ΔΔG ≤ + 1.84 kcal/mol, highly destabilizing: ΔΔG > + 1.84 kcal/mol.
In case of virtual saturation mutagenesis, all stabilizing and neutral mutations were labeled as 1. On the other hand, all destabilizing mutations for a residue position were labeled as 0. Total aggregate score for each position was calculated and termed as Mutational capacity per residue positions (MC/RP). A Python script was used for calculation and plotting.
Publication 2023
Mutagenesis Mutation Proteins Python Wound Healing

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Publication 2023
ARID1A protein, human Cells Core Stability Elasticity Hirsutism Hypersensitivity Light Microscopy Microscopy Staple, Surgical Vision Wound Healing
All speech data were transcribed in ELAN [39 ]. The duration between utterances was extracted automatically in milliseconds (ms). Positive durations correspond to gaps and negative durations correspond to overlaps. For the turn-taking analysis presented here we only considered cases where there was a speaker change. We do not consider whether the speaker change occurs at a TRP or not—in some cases it will, in other cases it will not (for example, where there is an apparent speaker switch for a mid-turn backchannel from another speaker which will split a single turn from a speaker into two utterances, with an intervening backchannel). Of course, this has consequences for the analysis and interpretation, however, the methodology applies equally to both PSz and C groups so differences between them are still relevant and meaningful. See also [40 ] for discussion of related issues.
Self-repairs were annotated using strongly incremental repair detection (STIR; [41 ]) which automatically detects speech repairs on transcripts. STIR is trained on the Switchboard corpus [42 ], and has been shown to be applicable to therapeutic dialogue, with high rates of correlation to human coders in terms of self-repair rate [43 ].
Hand movement was automatically extracted from the raw motion capture data. In order to control for individual variation, for each participant we extracted the movement from each of the three hand/wrist markers, and calculated the mean and standard deviation (s.d.) of movement in any direction by frame in millimetres (mm). For frames with missing markers, if this was fewer than 50 frames (frame rate 60 s−1), we imputed the missing data using a linear trajectory, otherwise left the data as missing. Following the methodology in [33 (link),44 ], to account for individual variation, for each pair of frames we calculated whether the movement between them was greater than the individual’s meanmovement+1s.d. , for any of the three markers, and if so marked this as movement. The use of all three wrist and hand markers helps to mitigate the points where single markers dropped out, e.g. owing to occlusion. The hand movement data were imported to ELAN. Visual inspection of the data suggested that using an individual’s mean+1s.d. is generally a good proxy for hand movement. However, this is not the case where this value was very low (owing to minimal or no movement, or extreme cases of marker drop out) in which case the algorithm was oversensitive to minor non-gestural movements caused by posture shifts, for example. It was also not accurate in cases where the value of the mean+1s.d. was very high (individuals who gesture a lot), in which case the algorithm was undersensitive to genuine gestures. For this reason, we introduced a lower and upper threshold for the movement values. These were set at 2 mm per frame for the lower bound and 5 mm per frame for the upper bound. These refinements to the movement calculation result in a more reliable and sensitive index of hand movement than has been adopted in previous analyses of this corpus (e.g. [33 (link)]).
It should be borne in mind that although we believe that our automatically derived hand movement measures are a good proxy for gesture, they do not distinguish between gestural hand movement and other hand movement (e.g. scratching, fidgeting). It is also the case that the automatic hand movement annotation captures only the movement phases of a gesture—including preparation and retraction [16 ], and will not pick up any hold phases of gestures, which are known to be interactionally relevant (see e.g. [45 (link)]), particularly in respect to turn-taking.
Analyses were performed in SPSS 28.
Publication 2023
Bears Dental Occlusion Homo sapiens Movement Reading Frames Speech Therapeutics Wound Healing Wrist
The cartilage tissue was immediately fixed in 4% (w/w) paraformaldehyde for 24 h and then transferred to 10% (w/w) disodium ethylenediamine tetraacetate (EDTA-Na2) to decalcify for 2 to 3 weeks. The samples were dehydrated with gradient concentration alcohol, cleared with xylene, and finally embedded in paraffin wax. Then, the embedded paraffin samples were cut into 5-micron slices, affixed to slides, and stored at room temperature. Before dyeing, the slices were baked at 65°C for 1 h, dewaxed with xylene, and then rehydrated under the condition of reducing the concentration of ethanol. A proper amount of 0.1% trypsin was added to cover the tissue wax for antigen repair, and it was incubated at 37°C for 30 min and washed three times with 1 × PBS. The endogenous peroxidase activity was blocked with 1.5% (w/w) hydrogen peroxide at room temperature for 10 min and then the slices were washed with 1 × PBS. A 5% normal goat serum working solution was added to the tissue wax block and sealed for 15 min at room temperature. Then, anti-GPX1/anti-GPX3/anti-DIO1 (1:50 dilution ratio, bs-11790-1-ap, protein technology)/anti-DIO2 (1:100 dilution ratio, bs-3673R, Bioss)/anti-DIO3 (1:50 dilution ratio, bs-40229) were added to the area, and the tissue wax block was kept at 4°C overnight (and immunoglobulin G was used as a negative control). The slices were washed with 1 × PBS and incubated using the rabbit SP kit (rabbit streptomycin-biotin detection system) (SP-9001, Zhongshan Jinqiao, Guangzhou, China) according to the manufacturer’s instructions. Freshly prepared DAB chromogenic solution (ZLI-9018, Zhongshan Jinqiao, Guangzhou, China) was added for slice staining and rinsed off gently with tap water. Hematoxylin re-staining, hydrochloric acid alcohol differentiation, flushing, and ammonia anti-blue addition were all carried out. Finally, the slices are dehydrated and installed under an alcohol-washed envelope. The two pathologists carried out and interpreted the IHC staining results under an optical microscope without knowing the source of the sample. The three-layer zones of cartilage joints were determined, according to the different morphologies of the cells, and three or more visual fields were randomly selected for statistical analysis of the positive staining rate (Schumacher et al., 1994 (link); Lorenzo et al., 1998 (link); Karlsson and Lindahl, 2009 (link)). In detail, the long axis of the superficial chondrocytes is parallel to the cartilage surface, and the cells are smaller and flatter than those in the middle and deep zones. The middle zone is randomly distributed in the matrix, and the deep zone is perpendicular to the surface, in which the cells have obvious columnar arrangement characteristics. We chose five visual fields of the same size randomly for each zone and counted at a magnification of 50.
Publication 2023
Ammonia Antigens azo rubin S Biotin Cartilage Cartilages, Articular Cells Chondrocyte Edetic Acid Epistropheus Ethanol Ethylenediamines Goat GPX3 protein, human Hematoxylin Hydrochloric acid Immunoglobulin G Light Microscopy Paraffin Paraffin Embedding paraform Pathologists Peroxidase Peroxide, Hydrogen Proteins PRSS1 protein, human Rabbits Serum Streptomycin Technique, Dilution Tissues Wound Healing Xylene

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More about "Wound Healing"

Wound repair, tissue regeneration, skin restoration, injury healing, skin healing, tissue healing, wound closure, wound management, wound care, tissue repair, tissue regeneration, skin regeneration, injury recovery, skin restoration, tissue restoration, wound treatment, wound therapy, wound healing research, wound healing protocols, wound healing products, wound healing optimization, wound healing acceleration, patient outcomes, skin repair, tissue repair, skin regeneration, tissue regeneration, injury recovery, skin restoration, tissue restoration, wound treatment, wound therapy, wound healing research, wound healing protocols, wound healing products, wound healing optimization, wound healing acceleration, patient outcomes.
Wound healing is a complex biological process in which the skin or other tissues repair themselves after an injury.
This process involves the formation of new tissue, the closing of the wound, and the restoration of function.
Wound healing research aims to identify optimal protocols and products to accelerate this process and improve patient outcomes.
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This platform allows them to locate cutting-edge protocols from the latest literature, preprints, and patents, and then use AI-driven comparisons to identify the optimal protocols and products for their needs.
By using this innovative platform, researchers can accelerate their breakthroughs and discover new ways to improve wound healing and patient outcomes.
In addition to PubCompare.ai, researchers may also utilize other tools and techniques to support their wound healing research.
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They may also use Matrigel, a basement membrane matrix, to create a more physiologically relevant microenvironment for cells.
Additionally, they may employ a Universal Mycoplasma Detection Kit to ensure the absence of mycoplasma contamination in their cell cultures, and use glass beads for cell disruption and homogenization.
Furthermore, researchers may incorporate antibiotics like penicillin and streptomycin to prevent bacterial contamination in their cell cultures and experiments.
By leveraging these tools and techniques, researchers can streamline their wound healing research and accelerate the development of new and improved wound healing protocols and products.