Total body imaging was acquired using the GE Healthcare Lunar iDXA and analyzed using enCORE software version 13.6. Daily quality control scans were acquired during the study period. No hardware or software changes were made during the course of the trial. Subjects were scanned using standard imaging and positioning protocols. For measuring android fat, a region-of-interest is automatically defined whose caudal limit is placed at the top of the iliac crest and its height is set to 20% of the distance from the top of the iliac crest to the base of the skull to define its cephalad limit (Figure 1 ). Abdominal SF and VF were estimated within the android region. Fat mass data from DXA was transformed into CT adipose tissue volume using a constant correction factor (0.94 g/cm3). This constant is generally consistent with the density of adipose tissue (29 (link)) and represents a value that was optimized in our training algorithm and not altered in the validation procedure.
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Cone-Beam Computed Tomography
Cone-Beam Computed Tomography
Cone-Beam Computed Tomography (CBCT) is a medical imaging technique that uses a cone-shaped X-ray beam to capture 3D images of the body.
This modality is commonly used in dentistry, maxillofacial surgery, and other applications where high-resolution imaging of bone and soft tissue structures is required.
CBCT scans provide detailed visualization of anatomical features, allowing for improved diagnosis, treatment planning, and research accuracy.
Compared to traditional fan-beam CT, CBCT offers reduced radiation exposure, faster scan times, and more compact equipment.
However, the reproducilbity of CBCT imaging can be challenging, requiring careful optimization of scanning protocols.
Researchers and clinicians can leverage PubCompare.ai's AI-driven tool to effortlessly identify the best CBCT protocols from literature, preprints, and patents, enabling new heights in their CBCT-based research and clinical applications.
This modality is commonly used in dentistry, maxillofacial surgery, and other applications where high-resolution imaging of bone and soft tissue structures is required.
CBCT scans provide detailed visualization of anatomical features, allowing for improved diagnosis, treatment planning, and research accuracy.
Compared to traditional fan-beam CT, CBCT offers reduced radiation exposure, faster scan times, and more compact equipment.
However, the reproducilbity of CBCT imaging can be challenging, requiring careful optimization of scanning protocols.
Researchers and clinicians can leverage PubCompare.ai's AI-driven tool to effortlessly identify the best CBCT protocols from literature, preprints, and patents, enabling new heights in their CBCT-based research and clinical applications.
Most cited protocols related to «Cone-Beam Computed Tomography»
Abdomen
Base of Skull
Cone-Beam Computed Tomography
Human Body
Iliac Crest
Tissue, Adipose
The CTF analytically describes the convolution applied to the images by the electron-optical system. Estimating its properties with high precision is essential for reversing the effects and obtaining high-resolution reconstructions43 (link). Whereas the methodology for measuring defocus and astigmatism from a micrograph’s power spectrum (PS) has been well-established12 (link), 44 (link), the recent increase in EM map resolution calls for a more localized approach. Local defocus variation of a seemingly flat sample can exceed 60 nm within a single micrograph, resulting in an out-of-phase CTF for some particles at resolutions beyond 3 Å. Attempts to address this issue by fitting the defocus per-particle have been made14 (link), but they require knowledge of particle positions, and lack robustness for all but the largest particle species. Even with a local smoothing approach, per-particle defocus requires high particle density to not lose accuracy compared to a global estimate. On the other hand, strong local irregularities in the specimen surface are almost never observed in tomographic volumes in vitro28 (link), suggesting per-particle precision might be unnecessary.
Astigmatism
Cone-Beam Computed Tomography
Electrons
5'-deoxy-5'-phosphonomethyladenosine phosphate
Axoneme
Chlamydomonas reinhardtii
Cone-Beam Computed Tomography
DNA Replication
Epistropheus
Hypersensitivity
Maritally Unattached
Mental Orientation
Microtubule-Associated Proteins
Microtubules
NADH Dehydrogenase Complex 1
Optimism
Plant Embryos
Radius
Seizures
Tomography
Yarrowia lipolytica
Ascending Aorta
Blood Vessel
Bronchi
Chest
Cone-Beam Computed Tomography
Contrast Media
Exhaling
Fingers
Inhalation
Lung
Pharmaceutical Preparations
Pulmonary Artery
Pulmonary Emphysema
Radionuclide Imaging
X-Ray Computed Tomography
Warp takes the local defocus and sample distortion, as well as magnification anisotropy into account when reconstructing full or partial tomographic volumes. For a partial reconstruction at any position in the volume, the original 2D images are sampled at the following positions: where R Euler is the rotation matrix for 3 Euler angles following the Xmipp convention55 (link), α is the stage tilt angle, ψ is the in-plane angle of the tilt axis, p is the particle position within the tomographic volume, and o is the in-plane offset of the tilt axis. The coordinates are centered within the volume and images. The CTF for each 2D image is calculated using a defocus of: where zTilt is the average defocus estimated for the tilt image, n Tilt is the sample plane normal, n Tilt,z is the z component of the normal, and * denotes the scalar product between two vectors. The reconstruction is performed in Fourier space using a gridding algorithm23 (link), with the data weighted by the respective CTF, and the dose- and tilt-dependent heuristic from RELION49 , but without the final deconvolution step (i. e. the weights are inserted as |CTF|, not as CTF2 (link)). To obtain a full tomogram, Warp reconstructs a uniform grid of small, cubical volumes with an overlap of 50%, and inserts the central 50% into the overall volume to account for artifacts associated with Fourier space reconstruction at the borders of the local volumes. This ensures the corrections can be applied with local precision and remain reasonably continuous between adjacent sub-volumes.
Anisotropy
Cloning Vectors
Cone-Beam Computed Tomography
Epistropheus
Reconstructive Surgical Procedures
Tomography
Most recents protocols related to «Cone-Beam Computed Tomography»
Following the institutional review board approval for the study (number: 119/2019; Muğla Sıtkı Koçman University Ethical Committee), a retrospective cohort analysis was performed using the medical records of patients. For the current study, patient consent is not required. All procedures executed involving human participants were in accordance with the ethical standards of the institutional ethical committee and with the 1964 Helsinki declaration.
A total of 146 patients who applied to the neurosurgery outpatient clinic with a recent abdominal CT (max three months) because of a lower back pain complaint were included in the study. Patients with a previous history of surgery or a vertebral fracture were excluded. After excluded patients, a total of 146 patients were included in the study, of whom 90 were female (61.6%) and 56 were male (38.4%). The mean age of the patients was 51.42±13.91 (20-82) years.
Lumbar vertebra CT scans of all patients were reviewed retrospectively. CT images at the level from L3-L4 intervertebral disc were analyzed for body composition of fat tissue and muscle mass volume through the dedicated CT software (Syngo.via, SOMATOM Definition Flash: Siemens Healthcare, Forchheim, Germany). The L3-L4 level was selected in sagittal reformat CT images with the software (Figure1 ).
The density range of -200, -40 HU was selected for the fat density measurement in the cross-section with the "region grooving" application in the angled axial images obtained parallel to the disc plane at this level. First, the fat volume in the whole section was measured (visceral and subcutaneous). Then, only the visceral adipose tissue volume was calculated by drawing borders to exclude subcutaneous adipose tissue (Figure2 ). The subcutaneous fat tissue volume was obtained by subtracting the visceral fat tissue volume from the total fat volume (Figure 3 ).
With the same application, muscle density was selected and paravertebral muscle tissue volume was calculated (bilateral musculus psoas major, musculus quadratus lumborum, musculus iliocostalis, musculus longissimus, musculus multifidus volumes). A Spearman correlation model was used to analyze visceral adiposity, subcutaneous fat, and muscle mass.
In CT images, each intervertebral disc space was evaluated in terms of the presence of osteophytes, loss of disc height, sclerosis in the end plates, and spinal stenosis (spinal canal narrowing under 15 mm AP diameter) to investigate the presence of degeneration. Each level was scored according to the presence of findings, with 1 point for the presence of osteophytes, loss of disc height, sclerosis in the end plates, and spinal stenosis. The total score at all levels (L1-S1) was calculated for each patient.
Statistical analyses were performed using IBM SPSS version 20.0 software (IBM Corp., Armonk, NY). The conformity of the data to normal distribution was assessed using the Shapiro-Wilk test. Normally distributed variables were presented as mean±standard deviation and those not showing normal distribution as median (minimum-maximum) values. Categorical variables were presented as numbers (n) and percentages (%). The Spearman's rank correlation coefficient test was used to determine the correlation between the measured parameters in various vertebral pathologies. Continuous variables were compared using the Mann-Whitney U test. The receiver operating characteristic (ROC) analysis was used to detect the area under the curve (AUC) and define the cutoff values with their sensitivities and specificities of the measurements. An alpha value of p<0.05 was accepted as statistically significant.
A total of 146 patients who applied to the neurosurgery outpatient clinic with a recent abdominal CT (max three months) because of a lower back pain complaint were included in the study. Patients with a previous history of surgery or a vertebral fracture were excluded. After excluded patients, a total of 146 patients were included in the study, of whom 90 were female (61.6%) and 56 were male (38.4%). The mean age of the patients was 51.42±13.91 (20-82) years.
Lumbar vertebra CT scans of all patients were reviewed retrospectively. CT images at the level from L3-L4 intervertebral disc were analyzed for body composition of fat tissue and muscle mass volume through the dedicated CT software (Syngo.via, SOMATOM Definition Flash: Siemens Healthcare, Forchheim, Germany). The L3-L4 level was selected in sagittal reformat CT images with the software (Figure
The density range of -200, -40 HU was selected for the fat density measurement in the cross-section with the "region grooving" application in the angled axial images obtained parallel to the disc plane at this level. First, the fat volume in the whole section was measured (visceral and subcutaneous). Then, only the visceral adipose tissue volume was calculated by drawing borders to exclude subcutaneous adipose tissue (Figure
With the same application, muscle density was selected and paravertebral muscle tissue volume was calculated (bilateral musculus psoas major, musculus quadratus lumborum, musculus iliocostalis, musculus longissimus, musculus multifidus volumes). A Spearman correlation model was used to analyze visceral adiposity, subcutaneous fat, and muscle mass.
In CT images, each intervertebral disc space was evaluated in terms of the presence of osteophytes, loss of disc height, sclerosis in the end plates, and spinal stenosis (spinal canal narrowing under 15 mm AP diameter) to investigate the presence of degeneration. Each level was scored according to the presence of findings, with 1 point for the presence of osteophytes, loss of disc height, sclerosis in the end plates, and spinal stenosis. The total score at all levels (L1-S1) was calculated for each patient.
Statistical analyses were performed using IBM SPSS version 20.0 software (IBM Corp., Armonk, NY). The conformity of the data to normal distribution was assessed using the Shapiro-Wilk test. Normally distributed variables were presented as mean±standard deviation and those not showing normal distribution as median (minimum-maximum) values. Categorical variables were presented as numbers (n) and percentages (%). The Spearman's rank correlation coefficient test was used to determine the correlation between the measured parameters in various vertebral pathologies. Continuous variables were compared using the Mann-Whitney U test. The receiver operating characteristic (ROC) analysis was used to detect the area under the curve (AUC) and define the cutoff values with their sensitivities and specificities of the measurements. An alpha value of p<0.05 was accepted as statistically significant.
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Abdomen
Cone-Beam Computed Tomography
Ethics Committees, Research
Homo sapiens
Intervertebral Disc
Low Back Pain
Males
Multifidus
Muscle Tissue
Neurosurgical Procedures
Obesity, Visceral
Operative Surgical Procedures
Osteophyte
Patients
Psoas Muscles
Pulp Canals
Sclerosis
Spinal Fractures
Spinal Stenosis
Subcutaneous Fat
Vertebra
Vertebrae, Lumbar
Visceral Fat
Woman
X-Ray Computed Tomography
All SBRT treatments were performed using a Helical Tomotherapy (HT) Hi-Art Treatment System (Accuray, Madison, WI, USA). The HT-SBRT technique and treatment planning were performed as previously described according to our institutional protocol [16 (link)]. The gross tumor volume (GTV) was delineated as a lesion observed at the lung window level on the enhanced CT and/or FDG-PET. The clinical target volume was equal to gross tumor volume. The internal target volume (ITV) was contoured based on the extension of GTVs at the all phases (5 inspiratory, 5 expiratory, and 1 resting phase) of the respiratory cycle on the four-dimensional CT (4D-CT) (Siemens Somatom Sensation, Siemens Healthineers Corporation, Germany) scanning to include the full movement of the tumor. To compensate for the uncertainty in tumor position and changes in tumor motion caused by breathing, the planning target volume (PTV) was extended by a margin of 0.5 cm from the ITV. Cone beam CT was implemented before each treatment to confirm the position of the target was achieved. The main factors determining the dose/fractionation scheme were tumor location, tumor size, and lung function parameters. In general, a total dose of 50 Gy/5 fractions (biologically effective dose [BED] = 100 Gy) was delivered for patients with peripherally located tumors and 60 Gy/10 fractions (BED = 96 Gy) was delivered for patients with centrally located tumors or tumors with extensive adherence to the chest wall. Dose constraints for the OARs were implemented according to the experience of the Radiation Therapy Oncology Group (RTOG) 0236 guidelines [2 (link)].
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Cone-Beam Computed Tomography
Exhaling
Four-Dimensional Computed Tomography
Lung
Movement
Neoplasms
Neoplasms by Site
Patients
Radiotherapy Dose Fractionations
Respiratory Physiology
Respiratory Rate
Tomotherapies, Helical
Wall, Chest
All images were displayed using a Christie Mirage S+6K DLP projector and Starglass screen (58”x78”) for both monoscopic and stereoscopic viewing. The direct volume rendering technique was used for displaying the volumetric CT data [1 (link)]. Viewing software was implemented in Python programming language using the Visualization Toolkit (VTK) open-source software module (Kitware Inc., Clifton Park, New York, USA) [20 ], and Qt graphical user interface library (The Qt Company, Espoo, Finland). The scans were rendered with an NVIDIA Quadro K5200 graphics processor using a ray casting technique, which performs an image-order rendering. All the images were rendered using the same customized color and opacity transfer functions, which were edited by an experienced radiologist, and could not be altered for this study. In the opacity transfer function, higher opacity was assigned for intensity values corresponding to cardiac tissues, and lower opacity was for intensities corresponding to other organs such as lungs to make them transparent. The color transfer function was edited interactively to enhance the aesthetics of cardiac tissues and vessels. The refresh rate for the project was set to 90 Hz, and no lag in rendering was observed during the interactions such as rotation and scaling. 3D scans were viewed with active shutter glasses, and users manipulated the images using a mouse.
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Blood Vessel
cDNA Library
Cone-Beam Computed Tomography
Eyeglasses
Heart
Lung
Mirage porcelain
Mus
Python
Radiologist
Radionuclide Imaging
Tissues
Irradiation was performed with patients in the supine position on a vacuum-fixed cushion using a linear accelerator (TrueBeam STx; Varian Medical Systems Inc.). To avoid overexposure of surrounding OARs, a single 25-Gy dose was delivered for maximum coverage within the treatment volume. Immediately after confirming the position of the target by cone beam CT, volumetric-modulated arc therapy was used with the abdominal compression technique to reduce respiratory motion. The medical team was on standby in the radiation control room, with heart rate and respiratory monitored in case any sudden change in status or ICD malfunction occurred.
Abdomen
Cone-Beam Computed Tomography
Linear Accelerators
Patients
Radiotherapy
Rate, Heart
Respiratory Rate
Vacuum
Volumetric-Modulated Arc Therapy
LD diameters used to calculate the ratios shown in Figure 3 D were estimated in IMOD applying imodcurvature to a model consisting of points picked along the LD monolayer in a single virtual tomographic slice. We assumed that LDs are spherical in shape as in the analysis of FM images (see above). If the equatorial plane of the LD appeared to be included in the tomogram, a single imodcurvature readout from the corresponding virtual slice was used to estimate the LD diameter. If the LD segment contained in the tomographic volume did not include the equatorial plane, two imodcurvature radii a and b were determined on two different virtual slices spaced in z-direction by z nm. The LD radius r was then calculated using the formula: . In one case of a large LD forming two interfaces with smaller LDs, the radius of the large LD could not be estimated because the fraction of the LD contained in the tomogram was too small. The two corresponding interfaces were therefore excluded from the analysis in Figure 3 D.
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Cone-Beam Computed Tomography
IMod
Radius
Tomography
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