S. pombe strain expressing RFP-mal3p and GFP-atb2p (gift of Stephen Huisman and Damian Brunner, EMBL, Heidelberg, Germany) and S.cerevisiae strains expressing EGFP- and mCherry-tagged endocytic proteins (described in Kaksonen et al., 2005 (link)) were grown in liquid YES medium and SD medium, respectively. All yeast cultures were grown at 30°C until reaching log phase, pelleted by filtering, and cryo-immobilized by HPF with a high pressure freezing system (EM PACT2; Leica).
MDCK-H2B-RFP cells (a gift of Daniela Holzer and Lars Hufnagel, EMBL, Heidelberg, Germany) were maintained in DME supplemented with 5% fetal calf serum andl -glutamine at 37°C under 5% CO2. Cells were grown on carbon-coated sapphire disks in 24-well dishes to 60–80% confluency. Purified HIV-eGFP-delEnv particles (Müller et al., 2004 (link); ∼250 ng p24/ well) provided by Manon Eckhardt (Universitätsklinikum Heidelberg, Heidelberg, Germany) were allowed to bind to the cell surface for 30–60 min on ice followed by cryo-immobilization by HPF with a high pressure freezing machine (HPM 010; BAL-TEC).
All samples were further processed by freeze substitution (FS) and embedding in a temperature-controlling device (model AFS2; Leica). FS occurred at −90°C for 48–58 h with 0.1% (wt/vol) uranyl acetate in glass-distilled acetone. Addition of 1–3% water, which is in some cases desired to improve membrane contrast (Walther and Ziegler, 2002 (link)), was tested and did not influence fluorescence retention. The temperature was then raised to −45°C (5°C/hour), and samples were washed with acetone and infiltrated with increasing concentrations (10, 25, 50, and 75%; 4 h each) of Lowicryl in acetone while the temperature was further raised to −25°C. 100% Lowicryl was exchanged three times in 10-h steps and samples were UV polymerized at −25°C for 48 h, after which the temperature was raised to 20°C (5°C/hour) and UV polymerization continued for 48 h. 300-nm sections were cut with a microtome (Ultracut UCT; Leica) and a diamond knife and picked up on carbon-coated 200 mesh copper grids. Blue (365 nm/415 nm) 0.02 µm FluoSpheres (Invitrogen) were pretreated (to reduce intensity) with 0.1% Tween 20 for 10 min, washed twice by ultracentrifugation at 100,000 g, resuspended in PBS, and adsorbed to the EM grids by placing the grids section face-down onto a 15-µl drop of FluoSpheres for 10 min. Grids were then washed with three drops of water and blotted with filter paper.
MDCK-H2B-RFP cells (a gift of Daniela Holzer and Lars Hufnagel, EMBL, Heidelberg, Germany) were maintained in DME supplemented with 5% fetal calf serum and
All samples were further processed by freeze substitution (FS) and embedding in a temperature-controlling device (model AFS2; Leica). FS occurred at −90°C for 48–58 h with 0.1% (wt/vol) uranyl acetate in glass-distilled acetone. Addition of 1–3% water, which is in some cases desired to improve membrane contrast (Walther and Ziegler, 2002 (link)), was tested and did not influence fluorescence retention. The temperature was then raised to −45°C (5°C/hour), and samples were washed with acetone and infiltrated with increasing concentrations (10, 25, 50, and 75%; 4 h each) of Lowicryl in acetone while the temperature was further raised to −25°C. 100% Lowicryl was exchanged three times in 10-h steps and samples were UV polymerized at −25°C for 48 h, after which the temperature was raised to 20°C (5°C/hour) and UV polymerization continued for 48 h. 300-nm sections were cut with a microtome (Ultracut UCT; Leica) and a diamond knife and picked up on carbon-coated 200 mesh copper grids. Blue (365 nm/415 nm) 0.02 µm FluoSpheres (Invitrogen) were pretreated (to reduce intensity) with 0.1% Tween 20 for 10 min, washed twice by ultracentrifugation at 100,000 g, resuspended in PBS, and adsorbed to the EM grids by placing the grids section face-down onto a 15-µl drop of FluoSpheres for 10 min. Grids were then washed with three drops of water and blotted with filter paper.