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Resazurin sodium salt

Manufactured by Merck Group
Sourced in United States, Germany, United Kingdom, Switzerland, Australia, Canada, Brazil

Resazurin sodium salt is a chemical compound commonly used as an indicator in various laboratory applications. It is a redox-sensitive dye that changes color based on the oxidation-reduction state of the surrounding environment. When used in cell culture systems, resazurin can be employed as a viability and cytotoxicity assay to measure cellular metabolic activity.

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304 protocols using resazurin sodium salt

1

Antimicrobial and Cytokine Assay Protocol

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Merck KGaA (Germany) provided gellan gum (Gelzan™ CM), vancomycin hydrochloride from Streptomyces orientalis (CAS number 1404‐93‐9), clindamycin hydrochloride (CAS number 21462‐39‐5), calcium chloride, formic acid, acetonitrile (LC–MS grade), methanol (LC–MS grade), resazurin sodium salt, streptozotocin (STZ), Mueller‐Hinton (MH) broth and MH agar. Mannitol salt agar (MSA) was purchased from Biolife Italiana S.r.l. (Italy). Dulbecco's Modified Eagle Medium (DMEM), fetal bovine serum (FBS), trypsin–EDTA buffer, L‐glutamine and HEPES buffer were purchased from Gibco™, ThermoFisher Scientific (USA). Other reagents, unless otherwise noted, were of analytical grade. LEGENDplex™ multi‐analyte flow assay kit (Cat. No. 740846) was provided by Biolegend® (USA). S. aureus Rosenbach BAA 2313™ was provided by American Type Culture Collection.
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2

Cell viability on extracellular matrices

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96-well plates (Corning) were coated with 1 mg/ml of each matrix: Myogel, porcine Lymphogel (p-LG) or human Lymphogel (h-LG) and incubated at 37 °C overnight. Next 7000 cells in 100 µl of complete medium was dispensed into each well and incubated for 3 days at 37 °C. Resazurin sodium salt (Merck) was added at a final concentration of 3 µg/ml, and fluorescence was analysed after 3 h using 544/15 (excitation) and 595/60 nm (emission) filters in the Victor3V 1420 Multilabel Counter equipment (Perkin Elmer Life, Waltham, MA, USA). Results represent the average of three independent experiments, performed in quintuplicates.
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3

Synthesis of Fluorescently Labeled Peptides

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Amino acid derivatives and piperidine were
obtained from Iris Biotech (Marktredwitz, Germany). N,N′-diisopropylcarbodiimide (DIC), 1-hydroxybenzotriazole (HOBt),
1,8-diazabicyclo[5.4.0]undec-7-ene (DBU), hydrazine monohydrate (N2H2·H2O), triisopropylsilane (TIS),
ammonium acetate (NH4OAc), palmitic acid, 6-maleimidohexanoic
acid, acetic anhydride (Ac2O), formic acid, Fmoc-Rink Amide
MBHA resin, and 5(6)-carboxyfluorescein (5(6)-FAM) were obtained from
Merck (Budapest, Hungary). Trifluoroacetic acid (TFA), N,N-dimethylformamide (DMF), dichloromethane (DCM), diethyl ether, and
acetonitrile (AcN) were from VWR (Budapest, Hungary).
For the
biological assays, RPMI-1640, Dulbecco’s modified Eagle’s
medium (DMEM), PBS, 2 mM l-glutamine, and trypan blue were
from Lonza (Basel, Switzerland), while trypsin, nonessential amino
acids, and penicillin–streptomycin were from Gibco (Thermo
Fisher Scientific, Waltham, MA). Fetal bovine serum (FBS) was from
EuroClone (Pero, Itlay); HPMI buffer (9 mM glucose, 10 mM NaHCO3, 119 mM NaCl, 9 mM HEPES, 5 mM KCl, 0.85 mM MgCl2, 0.053 mM CaCl2, 5 mM Na2HPO4 ×
2H2O, pH = 7.4) was prepared in-house using components
obtained from Merck (Budapest, Hungary). For the AlamarBlue assay,
resazurin sodium salt (Merck) was dissolved in PBS (0.15 mg/mL, pH
7.4) and sterile-filtered. Sigma Adjuvant System (SAS) was from Merck
(Budapest, Hungary).
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4

Biochemical Reagents for Cell Analysis

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In our study, 2,2-Azino-bis-3-ethylbenzothiazoline-6-sulfonic acid (ABTS solution), 2,2-diphenyl-1-picrylhydrazyl (DPPH), N,N,N′,N′-tetramethylethylenediamine (TEMED), acrylamide/bisacrylamide, ammonium persulfate (APS), ascorbic acid (vitamin C), bovine serum albumin (BSA), ethanol (96%), glycine, methanol, Ponceau S, resazurin sodium salt (RES), sodium dodecyl sulfate (SDS), Trolox, trypsin-EDTA solution, Tris-HCl, Tris-Base, and Tween-20 were purchased from Merck KGaA (Darmstadt, Germany). The PVDF membrane with 0.45 µm-pore size and primary antibodies against SOD1 were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The primary antibodies against GAPDH, NF-κB, IκBα, SRC, GLUT4, PCNA, PGC-1α, PPARγ, p-ERK1/2, and ERK1/2 were purchased from ABClonal (Woburn, MA, USA). The primary antibodies against NLRP3, anti-mouse- and anti-rabbit-HRP-conjugated antibodies were purchased from ThermoFisher (Waltham, MA, USA). Potassium persulfate (Warchem, Zakręt, Poland), antibiotics (Penicillin-Streptomycin, Life Technologies, Bleiswijk, The Netherlands), DMEM (Dulbecco’s Modification of Eagle’s Medium, Biological Industries, Beit Haemek, Israel), FBS (Fetal Bovine Serum, Biological Industries, Genos, Lodz, Poland), and phosphate buffered saline (PBS, pH 7.00 ± 0.05, ChemPur, Piekary Ślaskie, Poland) were also used during the analyses.
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5

Enzymatic Assay for G6PDH Activity

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Recombinant glucose-6-phosphate dehydrogenase (G6PDH) from Leuconostoc mesenteroides and recombinant diaphorase I from Clostridium kluyveri, poly (Glu, Tyr) substrate, ATP, ADP, glucose, and resazurin sodium salt were purchased from Merck. β-Nicotinamide adenine dinucleotide phosphate sodium salt hydrate (NADP + ) was purchased from Thermo Fischer Scientific.
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6

Biosynthesis of Titanium Nanoparticles using Trichoderma harzianum

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The commercial product Ecotrich WP 1 × 1010 UFC/g (Balagro, Brazil) was used to obtain the initial culture of T. harzianum to synthesize the nanoparticles. Titanium IV Rutile oxide (≥ 99.98% purity), MTT (3-(4,5-dimethylthiazolyl-2)-2,5-diphenyltetrazolium bromide) salt (≥ 97.5% purity), Trypan Blue dye and Resazurin sodium salt were purchased from Sigma Aldrich Chemicals, USA. Potato dextrose agar (PDA), potato dextrose broth (PDB) and Müeller Hinton broth (MHB) were obtained from Kasvi, Brazil. Dimethylsulfoxide (DMSO) (99.9% purity) was obtained from Dinâmica, Brazil; Power Soil DNA Isolation Kit was purchased from Qiagen. Qubit RNA HS Assay Kit and SUPERSCRIPT III RT were purchased from Thermo Fisher Scientific, USA. Other reagents were acquired analytically from local suppliers (Sorocaba, Brazil). Cytotoxicity and genotoxicity evaluations were performed using three cell lines (Table 1) obtained from BCRJ (Cell bank of Rio de Janeiro).

Cell lines used in cytotoxicity and genotoxicity assays: species, origin/code and technical characteristics

Cell lineSpeciesOriginTechnical characteristics
HaCatHomo sapiensBCRJ Code 0341

Tissue: Skin

Cell type: keratinocytes

V79-4

Cricetulus griséus

(Chinese Hamster)

BCRJ Code 0244

Tissue: Lung

Cell type: Fibroblasts

3T3—Swiss albino

Mus musculus

(Swiss albino)

BCRJ Code 0017

Tissue: Embrionary

Cell type: Fibroblasts

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7

Cytotoxicity Assay for 5-FU

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For assessment of 5-FU cytotoxicity, MCF7, A549, Panc-1, HCT116, HCT15 Parental, or HCT15 Resistant cells in their respective complete media were seeded in black 96-well polystyrene plates with clear bottom (Sigma) at a cell density optimal for each cell line (predetermined). The cells were first incubated for 24h at 37 C and % CO 2 in order to adhere to the plate and resume log-phase growth, then treated with either vehicle (DMSO) or respective compound diluted in the corresponding media supplemented with 5% heat inactivated FBS for the indicated duration. The final DMSO concentration was 0.4% in all wells. 10 mg/mL resazurin sodium salt (R7017, Sigma) was added to each well and further incubation was carried out for 2h. Fluorescence was measured at 590 nm using an EnSpire plate reader (Perkin Elmer).
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8

Biochemical Reagents for Assays

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Suramin sodium salt, resazurin sodium salt, phenylmethanesulfonyl fluoride (PMSF) and pyrogallol were purchased from Sigma-Aldrich (Gillingham, Dorset, UK). Eflornithine (DLα-difluoromethylornithine, DFMO) was ordered from Enzo Life Sciences Ltd. (Exeter, Devon, UK),
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9

Corneal Fibroblast Tolerance to Peptide

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The tolerance of human corneal fibroblasts to C16-YEALRVANEVTLN was determined using the Alamar blue assay, which correlates cellular metabolism to the reduction of a resazurin sodium salt (Sigma-Aldrich, Dorset, UK) by mitochondrial dehydrogenase activity. Fibroblastic cells, 1 × 104 per well, were seeded (serum free) into 24 well plates (Corning) and allowed to adhere overnight before exposure to 0.00125 wt% and 0.0025 wt% solutions of PA (either in monomeric or aggregated form prior to dilution) in SFM. Cultures were maintained for seven days or three weeks. PA-supplemented and un-supplemented (control) growth media were replaced every two days over the culture periods. At the end of these culture periods media were replaced with resazurin reagent (1 : 10 in SFM) and incubated for 3 hours (37 °C/5% CO2) at which point 100 μl samples were taken in duplicate from each well and assayed for fluorescence emission at 590 nm under excitation at 544 nm using a Fluoroskan Ascent™ (Thermo scientific, Paisley, UK). The cell number was calculated by interpolation using a standard curve for the fluorescence values derived from known numbers of cells, determined in parallel with each separate assay. The PA solutions had no effect, in either monomeric or diluted aggregate form, upon the reduction of resazurin in the absence of cells.
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10

Peptide Cytotoxicity Assay on HeLa Cells

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Cytotoxicity of the MTAbl peptides towards HeLa cells was evaluated before the cell internalization assay. The mammalian cell cytotoxicity assay was conducted using a method described earlier65 (link). HeLa cells were seeded the day before the assay in 96-well tissue culture-treated plates (2.5 × 103 cells/well). Peptides TAT, MCoTI-II, MTAbl06, 07, 09, 13 and 15 were dissolved and diluted in sterile H2O (2-fold dilutions starting from 640 μM). Peptide solutions were diluted 10-fold with serum-free medium and incubated with cells in triplicates for 2 h. Controls with H2O or 0.01% (v/v) Triton X were included to have 100% and 0% cell viability, respectively. Following incubation the peptide solutions were removed and aliquots of 10 μL of 0.02% (w/v) sterile resazurin (resazurin sodium salt, Sigma) were added to each well containing 100 μL of fresh medium. Cells were incubated under standard conditions of 37 °C and 5% CO2 for 22 h. The absorbance of the plates was measured on a plate reader at 540 and 620 nm. The cytotoxicity of peptides abltide, MCoTI-II, MTAbl06, 07, 13 and 15 against K562 cells was evaluated using the resazurin-based assay with 5 × 103 cells per well.
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