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Caspase 7

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Caspase-7 is a member of the caspase family of proteases. Caspases play a central role in the execution of the cell apoptosis (programmed cell death) program. Caspase-7 is involved in the cleavage of cellular substrates during apoptosis.

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145 protocols using caspase 7

1

Cytotoxic Effects of C086 on NSCLC

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The human NSCLC cell lines A549 and NCI-H1975 were obtained from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). The cells were cultured in RPMI-1640 media containing 10% fetal bovine serum, 100 U/mL penicillin, and 100 mg/mL streptomycin at 37°C in a humidified atmosphere of 5% CO2.
The bacterial strains and plasmids were obtained from the School of Life Science of Xiamen University, China. C086 (purity≥99%) was designed and synthesized by our laboratory (Figure 1B). C086 was dissolved in DMSO as a stock solution and diluted in culture media. Gefitinib was purchased from LC Laboratories (Woburn, MA, USA). Anti-Hsp90, anti-β-actin, anti-EGFR, anti-Ras, anti-C-Raf, anti-Akt, anti-P-Akt, anti-Mek, anti-P-Mek, anti-Erk½, anti-P-Erk, anti-C-Myc anti-Bax, anti-Bcl-2 (an apoptosis suppression protein), caspase-8, cleaved caspase-8, and the Apoptosis Antibody Sampler Kit containing PARP, cleaved PARP, caspase-9, cleaved caspase-9, caspase-3, cleaved caspase-3, caspase-7, cleaved caspase-7 were purchased from Cell Signaling Technology, Inc (Danvers, MA, USA). Annexin-V-APC/PI Apoptosis Detection Kit was purchased from Nanjing Keygen Biotech Co. Ltd (Nanjing, China). Propidium iodide (PI) was obtained from Sigma Aldrich.
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2

Colon Cancer Cell Autophagy and Apoptosis

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Human colon cancer cells HT-29 (Cat# 300215) and CaCo-2 (Cat # 300137) were purchased from CLS (cell lines service, Germany). Cells were cultured in DMEM supplemented with 10% fetal bovine serum and 100 U/mL penicillin/streptomycin at 5% CO2, 37°C and 95% humidity. 3-methyladenine (3-MA) and Z-VAD-FMK were obtained from sigma-Aldrich. Antibodies against target proteins used in this study are: caspase 8, caspase 7, LC3 and Beclin-1 (Cell Signaling, USA); cleaved caspase 3, Cyclin B1, H3 phospho-Ser10, γH2AX (Millipore), TNFα, p62/SQSTMI and cleaved PARP (Abcam), survivin and β-actin (Santa Cruz Biotechnology).
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3

Protein Isolation and Immunoblotting in Mouse and Human Livers

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Total protein was isolated from mouse and human livers, as described.17, 18 Membranes were probed with antibodies to β‐actin (#A5441; MilliporeSigma), caspase 3 (#9665; Cell Signaling, Beverly, MA), caspase 7 (#9492; Cell Signaling), cyclin A (#sc‐596; Santa Cruz Biotechnology, Santa Cruz, CA), cyclin B1 (#sc‐595; Santa Cruz Biotechnology), cyclin D1 (#MA1‐24750; Thermo Fisher Scientific), cyclin D2 (#sc‐593; Santa Cruz Biotechnology), cyclin D3 (#sc‐182; Santa Cruz Biotechnology), cyclin‐dependent kinase (CDK) 2 (#sc‐163; Santa Cruz Biotechnology), CDK4 (#sc‐260; Santa Cruz Biotechnology), E2F2 (#sc‐633; Santa Cruz Biotechnology), Fos‐related antigen 1 (#sc‐183; Santa Cruz Biotechnology), total STMN1 (#3352; Cell Signaling), phosphorylated (phospho)‐Serine (Ser)‐16 STMN1 (#3353; Cell Signaling), phospho‐Ser‐38 STMN1 (#3426; Cell Signaling), and tubulin (#9411; Cell Signaling).
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4

Immunoblot Analysis of Cell Signaling

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The following antibodies were used for immunoblotting: the antibodies against Sirt1 (Santa Cruz, CA, USA), p53 (Santa Cruz), acetylated‐p53 (Abcam, MA, USA), c‐Myc (Cell Signaling, MA, USA), caspase‐3 (Cell Signaling), caspase‐7 (Cell Signaling), and β‐actin (Sungene Biotech, Tianjin, China). All experiments were performed in duplicate.
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5

Comprehensive Antibody Panel for TGF-β Signaling

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Primary antibodies against Smad2, Smad3, phospho-Rb (Ser807/811), phospho-Smad2 (Ser465/467), phospho-Smad3 (Ser423/425), cleaved caspase-3, caspase-7, cleaved caspase-7, phospho-histone H3 (Ser10), PARP, and cleaved PARP were obtained from Cell Signaling Technologies. Antibodies against β-actin, cyclin D1, CKD4, HA-epitope, Rb, β2-spectrin, TGF-β receptor II, phospho-TGF-β receptor II (Tyr424), α-tubulin, and V5-epitope were obtained from Santa Cruz, anti-FLAG from Sigma, and antibody to Ki67 from Novus. These antibodies were used for Western blot, immunocytochemistry and immunohistochemistry experiments. In histological analysis, liver specimens were fixed in 10% formalin, blocked in paraffin, sectioned, stained with hematoxylin-eosin (H&E), and examined using light microscopy. Immunohistochemical analysis was performed using the ZYMED Histomouse Kit (Zymed), as described previously 13 (link). Western blot and immunohistochemical findings were quantified using AlphaEaseFC software (ver. 4.0, Cell Bioscience) and Leica Application Suite image analysis (ver. 4.2, Leica), respectively.
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6

Western Blot Analysis of Apoptosis Markers

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Whole cell extracts were obtained by lysing cells in a buffer containing 25 mM Tris-HCl pH 7.4, 1 mM EDTA, 1 mM EGTA, 1% SDS, plus protease and phosphatase inhibitors. The protein concentration was determined by the BCA protein assay. Cell lysates were resolved by SDS-PAGE, transferred to nitrocellulose membranes, blocked with 5% non fat milk, washed with 0.1% Tween/PBS and incubated overnight with a specific primary antibody. Membranes were washed and probed with the appropriate secondary antibody conjugated to horseradish peroxidase (Amersham Pharmacia Biotech). The antibodies against Caspase 3 (#96615) and Caspase 7(#9492) were obtained from Cell Signaling, α-tubulin antibody (#T8203) was obtained from Sigma-Aldrich and Bax (Sc 493) was obtained from Santa Cruz Biotechnology.
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7

Luteolin and BMS-5 Cellular Assays

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Luteolin (purity ≥ 98%) was purchased from Sichuan Weikeqi Biological Technology CO., Ltd (CAS#: 491‐70‐3). BMS‐5 (purity ≥ 98%) was purchased from Enzo Life Sciences (CAS#:1338247‐35‐0). CNBr‐activated SepharoseTM 4B (Lot# 10265330) was purchased from GE Healthcare. Thiazolyl blue tetrazolium bromide (MTT) powder was purchased from Solarbio Technology Co., Ltd. Dimethylsulfoxide (DMSO) was purchased from Sigma. Cyclin D1 (catalog# 2922), cyclin D3 (catalog# 2936), Bax (catalog# 5023), cleaved‐PARP (catalog# 5625), caspase‐3 (catalog# 9662), cleaved caspase‐3 (catalog# 9664), caspase‐7 (catalog# 9492), cleaved caspase‐7 (catalog# 8438), ROCK1 (catalog# 4035) and ROCK2 (catalog# 9029) were purchased from Cell Signaling Technology. Phospho‐LIMK‐1/2 (Thr 508/505)‐R (catalog# sc‐28409‐R), LIMK‐1(catalog# sc‐28370), cofilin (catalog# sc‐33779) and phospho‐cofilin (mSer3)‐R (catalog# sc‐21867‐R) were purchased from Santa Cruz Technology.
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8

Compound and Antibody Procurement Protocol

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The compound 3-DSC (cat: JOT-10796) was purchased from Chengdu Pufei De Biotech Co., Ltd (Chengdu, China), acetylshikonin (cat: YRY134) was purchased from Chengdu Yirui Biotech Co., Ltd. (Chengdu, China), and antibodies to detect total TOPK (cat: 4942, lot: 3), phosphorylated TOPK (cat: 4941, lot: 4), total ERKs (cat: 9102, lot: 4), phosphorylated ERKs (cat: 4370, lot: 2), total RSK (cat: 5528, lot: 5), phosphorylated RSK (cat: 11,989, lot: 2), total c-Jun (cat: 9165. lot: 3), phosphorylated c-Jun (cat: 3270, lot: 2), caspase-3 (cat: 9662, lot: 8), caspase-7 (cat: 12,827, lot: 12), cleaved caspase-3 (cat: 9664, lot: 4), cleaved caspase-7 (cat: 9491, lot: 4) and actin (cat: 3700, lot: 6) were purchased from Cell Signaling Technology (Beverly, MA, USA).
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9

Western Blot Analysis of Cell Signaling

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Western blot was performed according to standard protocol. The concentrations of antibodies used for western blot analysis were according to manufacturer's instructions. The primary antibodies against SDC2 protein was obtained from Thermo Fisher Scientific Inc., Pittsburgh, PA, USA. The primary antibodies against phospho-PI3K (p85-Tyr458/p55-Tyr199), PI3K, phospho-Akt (Ser473), Akt, phospho-JNK (Thr183/Tyr185), JNK, phospho-MEK (Thr286), MEK, phospho-ERK (Thr202/Tyr204), ERK, and the antibody kit for apoptosis-related protein (PARP, cleaved PARP, caspase-3, caspase-7, and caspase-9) were all purchased from Cell signaling Inc., Danvers, MA, USA. The primary antibody against anti-caspase-8, GAPDH, and β-actin were purchased from GeneTex Inc., Hsinchu, Taiwan.
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10

Apoptosis Pathway Modulation in Cells

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Taxol and the nitric oxide prodrug JS-K were purchased from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA), and dissolved in 100% dimethylsulfoxide (DMSO) as stock solutions (Taxol, 10 mM; JS-K, 5 mM). The final concentration of DMSO did not exceed 0.1% in any experiment. N-acetylcysteine (NAC) and oxidized glutathione (GSSG) were obtained from Beyotime Institute of Biotechnology (Haimen, China) and dissolved in PBS to concentrations of 100 mM (NAC) and 5 mM (GSSG). Antibodies against BRI1-associated receptor kinase 1 (Bak, cat no. 3814), Bcl-2-associated X protein (Bax, cat no. 2772), B-cell lymphoma (Bcl-2, cat no. 2876), cleaved caspase-3 (cat no. 9661), caspase-7 (cat no. 9494) and caspase-9 (cat no. 9502) were purchased from Cell Signaling Technology, Inc. (Danvers, MA, USA) and an antibody against GAPDH was purchased from Abcam (Cambridge, MA, USA) to be used as a loading control. Horseradish peroxidase (HRP) goat anti-rabbit and anti-mouse IgG secondary antibodies were purchased from EarthOx Life Sciences (Millbrae, CA, USA).
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