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Pgl3 basic plasmid

Manufactured by Addgene
Sourced in United States

The PGL3-basic plasmid is a commonly used vector for gene expression studies. It contains a multiple cloning site (MCS) that allows for the insertion of a gene of interest. The plasmid also includes a promoter and a reporter gene, which can be used to measure the expression of the inserted gene.

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6 protocols using pgl3 basic plasmid

1

Luciferase Assay for miR-154-5p Binding

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The MALAT/AQP9 wild type (WT) sequences or mutant (mut) sequences in 3′-UTR containing the miR-154-5p binding site were constructed and subcloned into the pGL3 basic plasmid (Addgene, Inc.). 293 cells were seeded in 48-well plates for 24 h. Then miR-154-5p mimics and miR-NC were co-transfected into 293 cells with pGL3-WT/mut-MALAT1 for 24 h. Plasmids (200 ng) were mixed with Lipofectamine® 2000 (Invitrogen; Thermo Fisher Scientific, Inc.) and DMEM medium for 20 mins, then the mixtures were added into 293 cells for 24 h. Following transfection for 24 h, the cells were lysed and the activity of firefly luciferase and Renilla luciferase was measured by using dual-luciferase reporter assay (Promega Corporation). The ratio of the two identified the relative activity of luciferase.
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2

Investigating miR-92a-3p Regulation of OIP5-AS1

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The OIP5-AS1 wild-type (WT) and mutant (mut) untranslated region (3’-UTR) containing the miR-92a-3p binding site were constructed and subcloned into the pGL3 basic plasmid (Addgene, Inc.). Then, 293 T cells were grown in 24-well plates and incubated at 37°C. Subsequently, the miR-92a-3p mimic and miR-NC were co-transfected into 293 T cells with pGL3-WT or mut-OIP5-AS1 for 48 h. The cells were lysed, and the firefly luciferase activity was measured and normalized to Renilla luciferase activity with the adoption of a Dual-Luciferase Reporter assay system (Promega Corporation) as per the operating protocols.
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3

Regulation of OTX1 by miR-129-5p

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MiR-129-5p or miR-129-5p-mut mimics were purchased from RiboBio Co., Ltd. (Guangzhou, China). DNA fragments from the 3′-untranslated region (UTR) of OTX1 containing the predicted complementary sites of miR-129-5p were constructed into a pGL3-basic plasmid (Addgene, Cambridge, USA). LSCC cells (1× 104) were seeded in 48-well plates in triplicate and settled for 24 h. Next, the pGL3-OTX1–3′-UTR reporter plasmids (100 ng) plus 5 ng of pRL-TK Renilla plasmid (Promega, Madison, USA), and increasing amounts (10 and 50 nM) of negative control (NC) or miR-129-5p or miR-129-5p-mut mimic were co-transfected into LSCC cells using Lipofectamine LTX reagent (Invitrogen, Carlsbad, USA) according to the manufacturer’s recommendation. Luciferase and Renilla signals were measured 24 h after transfection using the Dual Luciferase Reporter Assay Kit (Promega, Madison, USA) according to a protocol provided by the manufacturer. The sequences of miR-129-5p and miR-129-5p-mut were 5′-cuuuuugcggucugggcuugc-3′ and 5′-cuuuuugcggucugguugugc-3′, respectively.
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4

Dual-Luciferase Assay for miR-129-5p Targeting

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MiR-129-5p or miR-129-5p-mut mimics were purchased from RiboBio Co., Ltd (Guangzhou, China). DNA fragments from the 3′-untranslated region (UTR) of OTX1 containing the predicted complementary sites of miR-129-5p were constructed into a pGL3-basic plasmid (Addgene, Cambridge, USA). LSCC cells (1× 10 4 ) were seeded in 48-well plates in triplicate and settled for 24h. Next, the pGL3-OTX1 -3'-UTR reporter plasmids (100ng) plus 5 ng of pRL-TK Renilla plasmid (Promega, Madison, USA), and increasing amounts (10 and 50nM) of negative control (NC) or miR-129-5p or miR-129-5p-mut mimic were cotransfected into LSCC cells using Lipofectamine LTX reagent (Invitrogen, Carlsbad, USA) according to the manufacturer's recommendation. Luciferase and Renilla signals were measured 24 h after transfection using the Dual Luciferase Reporter Assay Kit (Promega, Madison, USA) according to a protocol provided by the manufacturer. The sequences of miR-129-5p and miR-129-5p-mut were 5'cuuuuugcggucugggcuugc-3' and 5'-cuuuuugcggucugguugugc-3', respectively.
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5

Dual-Luciferase Assay for miR-129-5p Targeting

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MiR-129-5p or miR-129-5p-mut mimics were purchased from RiboBio Co., Ltd (Guangzhou, China). DNA fragments from the 3′-untranslated region (UTR) of OTX1 containing the predicted complementary sites of miR-129-5p were constructed into a pGL3-basic plasmid (Addgene, Cambridge, USA). LSCC cells (1× 10 4 ) were seeded in 48-well plates in triplicate and settled for 24h. Next, the pGL3-OTX1 -3'-UTR reporter plasmids (100ng) plus 5 ng of pRL-TK Renilla plasmid (Promega, Madison, USA), and increasing amounts (10 and 50nM) of negative control (NC) or miR-129-5p or miR-129-5p-mut mimic were cotransfected into LSCC cells using Lipofectamine LTX reagent (Invitrogen, Carlsbad, USA) according to the manufacturer's recommendation. Luciferase and Renilla signals were measured 24 h after transfection using the Dual Luciferase Reporter Assay Kit (Promega, Madison, USA) according to a protocol provided by the manufacturer. The sequences of miR-129-5p and miR-129-5p-mut were 5'cuuuuugcggucugggcuugc-3' and 5'-cuuuuugcggucugguugugc-3', respectively.
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6

Validating miR-129-5p Regulation of OTX1

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MiR-129-5p or MiR-129-5p mut mimics were purchased form RiboBio Co., LTD (Guangzhou, China). DNA fragment form the 3′-untranslate region (UTR) of OTX1 containing the predicted complementary sites of MiR-129-5p were constructed into a pGL3-basic plasmid (Addgene, Cambridge, USA). 1 × 10 4 LSCC cells were seeded in 48-well plates in triplicate and settled for 24 h. Then, the pGL3-OTX1 -3'UTR reporter plasmids (100 ng) plus 5 ng of pRL-TK renilla plasmid (Promega, Madison, USA), and increasing amounts (10 and 50 nM) of negative control (NC), MiR-129-5p or MiR-129-5p mut mimic were cotransfected into LSCC cells using Lipofectamine LTX reagent (Invitrogen, Carlsbad, USA) according to the manufacturer's recommendation. Luciferase and renilla signals were measured 24 h after transfection using the Dual Luciferase Reporter Assay Kit (Promega, Madison, USA) according to a protocol provided by the manufacturer.
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