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12 protocols using cd40l

1

Multiparametric Flow Cytometry Assay

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Antibodies and dilutions used for staining included CD4 (RM4-5, 1:200), CD44 (IM7, 1:200), ICOS (C398.4A, 1:100), TCRβ (H57-597, 1:100), F4/80 (BM8, 1:400), and T-bet (c4B10, 1:50) all from eBioscience; PSGL-1 (2PH1, 1:1000), B220 (RA3-6B2, 1:400), GL-7 (GL7, 1:400), CD95 (Jo2, 1:400), CD138 (281-2, 1:400), CD11b (M1/70, 1:400), Gr-1 (RB6-8C5, 1:400), CD8 (53-6.7, 1:200), Bcl6 (K112-91, 1:50), and CD40L (MR1, 1:50), all from BD Bioscience; PD-1 (RMP1-30, 1:200), IgD (11-26, 1:400), CXCR5 (L138D7, 1:1000), Ki-67 (16A8, 1:100), and IFN-γ (XMG1.2, 1:100), all from BioLegend; granzyme B (GB11, 1:200, Invitrogen) and IL-21R–FC (1:50, R&D Systems). For intracellular cytokine staining, cells were stimulated with PMA (50 ng/ml) and ionomycin (1 μg/ml) for 2 hours with Golgi Plug (BD Bioscience) for an additional 2 hours. Cells were fixed (BD CytoFix/CytoPerm™) and permeabilized (BD PERM/Wash™) following the manufacturer's protocol. IL-21 was detected by PE-conjugated F(ab')2 (1:400, Jackson ImmunoResearch). For intracellular transcription factor staining, surface molecule-stained cells were fixed and permeabilized using the buffer (eBioscience) without stimulation, and followed by staining for transcription factors. Stained cells were analyzed using a LSRII multilaser flow cytometry (BD) and followed by FlowJo software (Tree Star).
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2

Caspase Activation in CAR-T Cells

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The following monoclonal antibodies conjugated with fluorochromes were used: Coxackie-adenovirus receptor, GD2, CD95 (Fas), CD80, CD86, CD40L, OX40L, CD25, CD69, IFN, CD3, granzyme B (BD Biosciences), TRAIL, TRAIL-R1 and TRAIL-R2 (Biolegend). Expression of GD2.CAR by T cells was detected using a specific anti-idiotype, 1A7 (TriGem, Titan), followed by staining with secondary antibody RAM-IgG1 (BD Biosciences). FACS data were collected with a FACSCalibur (Becton Dickinson) and analyzed using FloJo software version 9.3 (Tree Star). For the caspase assay, CHLA-255 cells were seeded in 24-well plates (1 × 105/well), infected with Ad5Δ24 or mock (100 vp/cell), and cultured for 4 days. Control and GD2.CAR-T cells (2.5 × 105/well) were then added to the tumor cells. Active caspases in CHLA-255 cells were measured at 0, 2 and 4 hrs by FACS. The apoptotic cells were stained using Vybrant FAM Poly Caspases Assay Kit (Molecular Probes) according to manufacture’s instructions. The frequency of early apoptotic cells was determined as percentage of FAM+ (carboxyfluorescein group as a reporter) cells excluding CD3+ and PI+ cells from the analysis(32 (link)).
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3

Multiparameter Flow Cytometry Analysis

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Preconjugated fluorescent antibodies were from BD Biosciences (San Jose, CA, USA) (CD14–phycoerythrin (PE), P-selectin (CD62P)–PE, immunoglobulin G (IgG1)–PE, CD16–PE-Cy5, CD40L–PE, CD42a–fluorescein isothiocyanate (FITC), PAC-1–FITC, CD147–FITC, TNF-α–FITC, IL-6–FITC, CD61–PerCP, CCR2–Alexa Fluor and BrdU Flow Kit). Anti-CD147 antibody was provided by the Department of Cell Biology, Fourth Military Medical University (Xi’an, China). An anti-IKK beta (IKKβ) antibody was also used (Abcam, Cambridge, UK).
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4

Cytokine and Immune Cell Profiling

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Blood was centrifuged and serum was separated and preserved at –70 °C in a refrigerator for cytokine analysis. After hemolysis of red blood cell (RBC), the precipitate was suspended in flow cytometry buffer solution. The harvested lymph node was mechanically dissociated, and a single cell suspension was made with 40 µm nylon cell strainer. Anti-human fluorescein isothiocyanate (FITC) CD4, phycoerythrin (PE) CD40L, PerCP-Cy5.5 CD8, allophycocyanin (APC) CD40, FITC CD33, and PerCP-Cy5.5 CD19 (BD Bioscience, CA, USA) were used for staining.
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5

Establishing Murine CD40L Bystander Cell Line

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The BCG bystander cell line was established in Dr Antonia’s lab using a pCDNA3.1 plasmid with murine CD40L transfected into B78H1 GM-CSF cell lines with the FUGENE transfection system. Cells were cultured in RPMI complete media at 37°C and 5% CO2 with 50 µg/mL hygromycin and 50 µg/mL G-418 for antibiotic selection. Expression of CD40L (BD Biosciences, San Jose, CA, USA) and GM-CSF (R&D Systems, Inc., Minneapolis, MN, USA) in cell aliquots with their supernatant was analyzed by flow cytometry analysis and cytometric bead flow assay (BD Biosciences), respectively. The cells were left in culture flasks overnight, and the next day they were collected and frozen in aliquots of 10×106/mL in 90% fetal bovine serum and 10% dimethyl sulfoxide to be thawed on vaccination days.
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6

Stimulation and Immunophenotyping of PBMCs

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PBMC were suspended in culture medium (complete medium) for viability test with trypan blue (Gibco) and rested in an incubator overnight at 37°C, with 5% CO2. After counting, cells were suspended in culture medium and stimulated with 4μg/ml of GMZ2 vaccine antigen (Henogen S.A. Belgium) for 18h for the T cell panel using 1μg/ml of Staphylococcus Enterotoxin B (Sigma-Aldrich) as positive control, and 6h for the B cell panel using 10μg/ml CPG (Invivogen) + 50ng PMA (Thermo Fisher) + 1μg IONO (Thermo Fisher) as positive control. Unstimulated cells as negative control were incubated in culture medium alone. For the T and B cell panels, cells were cultured in the presence of anti-CD28/CD49d antibodies (BD Biosciences) and CD40L (BD Biosciences) respectively at a concentration of 1μg/ml. In order to assess Forkhead box P3 (Foxp3) expression and IL-10 production, 1μg/ml of Golgi Plug (BD Biosciences) was added two hours after PBMC stimulation. Each plate used for cell stimulation included PBMC isolated both on D0 and on D84.
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7

Characterizing T-cell Functionality by Flow Cytometry

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T-cell lines were analyzed with monoclonal antibodies to: CD3, CD4, CD8, CD56/16, CD45RA, CD62L (Becton Dickinson). To detect CMV-pp65- and CMV-IE-1-specific T-cells in the T-cell lines, we used the soluble CMV-pp65 pentamers HLA-A*02-NLV, HLA-A*02-LQT, HLA-A*02-MLN, HLA-A*24-QYD, HLA-B*7-TPR, HLA-B*7-RPH, and HLA-A*01-YSE (prepared by Proimmune Inc). Tetramers for HLA-A*02-LQT, HLA-A*02-MLN, and HLA-B*35-DAN were first created by the Protein Core Facility of Baylor College of Medicine and the Dan L. Duncan Cancer Center. Functionality of the T-cells was assessed by the flow cytometric detection of intracellular accumulation of IFN-γ, granulocyte-macrophage colony stimulating factor (GM-CSF), interleukin 2 (IL-2), tumor necrosis factor-α (TNF-α), and CD40 ligand (CD40L) (all from BD Biosciences) as previously described. (48 (link), 49 (link)) Briefly, T-cells were stimulated with 1 μg/mL final concentration of each Pepmix; medium alone was used as the negative control. After incubation for 1 hour at 37°C, 10 μg/mL of Brefeldin A (Sigma) was added for an addition 5 hours. Cells were then washed, fixed, and analyzed using a FACSAria or LSRII flow cytometer (BD Biosciences). When possible at least 200,000 live events were acquired per tube. Data analysis was performed using FlowJo.
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8

Isolation and Differentiation of Murine Naive B Cells

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Whole spleens were mechanically disassociated through a 40 m filter followed by red blood cell lysis with ammonium-chloride-potassium lysing buffer. Naïve mature B cells were isolated from spleen cells by immunomagnetic negative selection with anti-CD43 (Miltenyi Biotec). B cells were cultured in RPMI-1640 medium (Corning) supplemented with 10% FBS (Gibco), 1% penicillin/streptomycin (Corning), 1% MEM non-essential amino acids (Gibco), 1% sodiumpyruvate (Corning), 1% L-glutamine (Gibco), and -mercaptoethanol (50 M). B cells were stimulated with 1 ug/ml CD40L (BD Pharmingen) and 25 ng/ml IL-4 (R&D Systems) or with 0.1 ug/ml CD40L, 10 ng/ml IL-4, and 5 ng/ml IL-5 (R&D Systems) to monitor B cell processes during B cell differentiation or to monitor differentiation with increased plasma cell (PC) frequency, respectively (Shi et al., 2015) . For isolation of in vitro generated PCs used for Seahorse Extracellular Flux Analyzer assays, cultures stimulated for 5 days with CD40L, IL-4, and IL-5 were enriched for live cells using a dead cell removal kit (Miltenyi Biotec) followed by CD138-APC (BD Pharmingen) staining. CD138 + PCs were enriched by positive immunomagnetic enrichment of APC (Miltenyi Biotec). For Caspase 3/7, Mitrotracker Green, and TMRE staining experiments, in vitro generated PCs were isolated by immunomagnetic positive selection with anti-CD138 (Miltenyi Biotec).
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9

Multiparametric Phenotyping of T Cells

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Fluorochrome conjugated anti-human mAb specific to HLA-A2, CD3, CD8, CD28, CD38, CD40L, CD69, ICOS, TCRαβ, CCR7, CD45RO, CD80, CD86, ICOS ligand, IFN-γ, CTLA-4, PD-1, PD-L1, PD-L2, T-bet, granzyme B or Akt were purchased from Becton Dickinson (San Diego, CA). Fluorochrome conjugated anti-human Eomes mAb was purchased from eBioscience (San Diego, CA). Recombinant human IL-2, IL-4, IFN-α and TNF-α were purchased from R&D Systems, and human GM-CSF was obtained from Immunex (Seattle, WA). Lenalidomide (Celgene, Summit, NJ) was reconstituted in 1% DMSO and was used at a final concentration of 5 μM to treat either XBP1-CTL or various tumor cell lines.
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10

Multiparametric Phenotyping of T Cells

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Fluorochrome conjugated anti-human mAb specific to HLA-A2, CD3, CD8, CD28, CD38, CD40L, CD69, ICOS, TCRαβ, CCR7, CD45RO, CD80, CD86, ICOS ligand, IFN-γ, CTLA-4, PD-1, PD-L1, PD-L2, T-bet, granzyme B or Akt were purchased from Becton Dickinson (San Diego, CA). Fluorochrome conjugated anti-human Eomes mAb was purchased from eBioscience (San Diego, CA). Recombinant human IL-2, IL-4, IFN-α and TNF-α were purchased from R&D Systems, and human GM-CSF was obtained from Immunex (Seattle, WA). Lenalidomide (Celgene, Summit, NJ) was reconstituted in 1% DMSO and was used at a final concentration of 5 μM to treat either XBP1-CTL or various tumor cell lines.
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