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15 protocols using bca protein assay kit

1

Quantitative Western Blotting Analysis

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Western blotting was performed using standard techniques as described previously12 (link). Total cell extracts were collected and quantified using BCA Protein Assay Kit (Wanlei Bio, Shenyang, China) according to the manufacturer’s protocols. Fifty micrograms of proteins were electrophoresed through 10% SDS polyacrylamide gels and then transferred onto polyvinylidene difluoride membranes (Millipore, USA). The membranes were blocked with 5% non-fat milk in Tris-buffered saline with Tween 20 for 2 h at room temperature and incubated with primary antibodies overnight at 4 °C. Secondary antibodies labeled with horseradish peroxidase (HRP) were used to incubate the membrane at room temperature for 2 h and the signals were detected using ECL Kit (Wanlei Bio, Shenyang, China). Subsequently, the images were analyzed by Bio-Rad ChemiDoc MP system. ACTIN antibody was used as internal standard for the whole-cell lysates. The details of antibodies were listed in Supplemental Table 2. The band intensity was analyzed by ImageJ software and the relative expression was defined as the comparison of experiment group to control group. All the western blotting assays were performed by three independent replicates and an average of three independent assays were used for statistical analyses.
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2

Protein Expression Analysis in SO Tissue

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Per the instructions of the total protein extraction kit (Wanleibio), cleavage was performed, and protein lysates were extracted from the SO tissue to detect the expression levels of protein. The protein concentrations were measured using a BCA protein assay kit (Wanleibio). Samples were run on SDS-polyacrylamide gel electrophoresis and transferred onto PVDF membranes. The membranes were incubated in 5% milk to reduce the non-specific binding. Antibodies against c-kit, the cleaved caspase-3, Bax, and Bcl-2 antibodies, and β-actin (1:1000 dilution) were used for Western blotting. The first antibody was placed in a damp dark room at 4°C overnight and subsequently added to the sections. After washing with PBS, the membranes were incubated with the secondary antibody (HRP-labeled goat anti-rabbit IgG; 1:5000) for 2 h at room temperature and were processed for exposure. The densities of the bands were quantified using protein assay software (Bio-Rad Co, CA, USA). All primary antibodies utilized in this study are listed in Table 1.
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3

Western Blot Analysis of Cell Signaling Proteins

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Cells were lysed by RIPA lysis with 1% PMSF on ice for 1 h, and centrifuged with 12,000× g at 4 °C for 40 min. The protein concentration was determined by a BCA protein assay kit (Wanleibio, China). 30 μg protein was separated on 10% SDS-PAGE gel and transferred into a polyvinylidene difluoride (PVDF) membrane in a wet electron transfer device. 5% skimmed milk in Tris-buffered saline (TBS) containing 0.05% Tween 20 was used to block the membrane for 2 h at room temperature. The membranes were incubated with different primary antibodies at 4 °C overnight and incubated with horseradish peroxidase (HRP)-conjugated goat anti-rabbit or goat anti-mouse for 1.5 h at room temperature. The primary antibodies are as follows: YTHDF1 (Cell Signaling Technology, #86463, USA, 1:1000), BRCA1 (Cell Signaling Technology, #9010, USA, 1:1000), CDK2 (Cell Signaling Technology, #2546, USA, 1:1000), Cyclin E2 (Cell Signaling Technology, #4132, USA, 1:1000), PCNA (SANTA, sc-71858, USA, 1:1000), RAD51 (Abcam, ab133534, USA, 1:1000), P21 (Cell Signaling Technology, #2947, USA, 1:1000), E2F8 (Abcam, ab109596, USA, 1:2000), METTL14 (Cell Signaling Technology, #51104, USA, 1:1000). An enhanced chemiluminescene (ECL) kit (Wanleibio, China) was used to visualize the target protein.
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4

Quantitative Western Blot Analysis

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Total proteins were extracted from tissues or cells using a lysis buffer (Wanleibio, WLA019, Shenyang, China). Proteins were quantified using a BCA protein assay kit (Wanleibio, WLA004, Shenyang, China). The denatured proteins are then separated by SDS-PAGE followed by an electrophoretic transfer onto a PVDF membrane. After blocking with 5% nonfat dry milk at room temperature for an hour, the membranes were incubated with the primary antibodies against ACSL4 (Abclonal, A6826, Wuhan, Hubei, China), glutathione peroxidase 4 (GPX4) (Abclonal, A11243, Wuhan, Hubei, China) and ferritin heavy chain (FTH) (Wanleibio, WL05360, Shenyang, China) at 4 °C. The membranes were then incubated with diluted secondary antibodies (1: 5000, Wanleibio, WLA023, Shenyang, China). Quantification of band intensities was performed using Gel-Pro-Analyser software.
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5

Analyzing H60 Expression in EMT-6 Cells

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The EMT-6 cells were incubated with or without CpG ODN-conditioned supernatant for 24 hours, washed with PBS, harvested and lysed in ice-cold RIPA buffer (150 mM NaCl, 50 mM Tris, pH 7.4, 1% NP-40, 0.5% sodium deoxycholate and 0.1% SDS). The cell lysate were centrifuged (14,500g for 20 min at 4°C) and the supernatant was collected, quantified using a BCA protein assay kit (Wanleibio, Shenyang, China) and separated by 12% SDS-PAGE. Then the separated protein bands were transferred to polyvinylidene difluoride membranes (Millipore, USA). The membranes were blocked overnight at 4°C with Tris-buffered saline containing 5% nonfat dried milk and then incubated with anti-H60 mAb (R&D system, USA) or anti-GAPDH mAb (Proteintech, USA). Blots were then incubated with horseradish peroxidase (HRP)-conjugated goat anti-mouse IgG for 1 h at room temperature (Jackson immunoresearch laboratories, USA). Immunoreactive bands were visualized with SuperSignal West Pico chemiluminescent substrate (Thermo, USA).
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6

Western Blot Analysis of Retinal Proteins

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Total protein was extracted from HRECs or retinal tissues using a Whole Cell Lysis Assay (Wanleibio, Shenyang, China), and the protein concentration was detected using the BCA Protein Assay kit (Wanleibio). Forty micrograms of total protein were separated by 6%, 8%, or 12% SDS-PAGE and were transferred onto polyvinylidene fluoride membranes (Millipore, Bedford, MA, USA) at 80 V for 90 min. After blocking with 5% skimmed milk for 1 h, the membranes were incubated with primary antibodies, anti-ROBO4 (1:1000; 2022-1-AP, Proteintech, Wuhan, China), anti-DNMT1 (1:1000; 24206-1-APm, Proteintech), anti-TET2 (1:1000; A5682, ABclonal, Wuhan, China), anti-ZO-1 (1:500; WL03419, Wanleibio), anti-occludin (1:500; WL01996, Wanleibio), or anti-β-actin (1:1000; WL01845, Wanleibio) overnight at 4 °C. The membranes were then incubated at 37 °C for 45 min with a horseradish peroxidase-conjugated secondary antibody (1:5000; WLA023, Wanleibio) and developed using enhanced chemiluminescence substrate. All bands were quantified using a Gel-Pro Analyzer, and band densities were normalized to β-actin values.
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7

Western Blot Analysis of RAW264.7 Cells

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RAW264.7 cells were seeded in dishes with 6 cm at 2 × 106 cells/well in RPMI 1640 complete medium in a humidifying incubator filled with 5% CO2 at 37°C overnight. Cells were processed with 500 ng/ml LPS, and indicated three concentration of SOG (25, 50, 100 μM) after changing of medium. After washing three times with ice-cold PBS, cells were lysed in RIPA buffer consisted of 150 mM NaCl, 50 mM Tris, pH 7.4, 1% NP-40, 0.5% sodium deoxycholate and 0.1% SDS. The supernatant was collected after being centrifuged at 14,500 g at 4°C for 20 min. A BCA-protein assay kit (Wanleibio, Shenyang, China) was employed to determine contents of protein of samples. Fifty micrograms of protein were isolated using 12% SDS-PAGE and electro-transferred to a PVDF membranes (Millipore, U.S.A.). The membranes were blocked by TBST containing 3% BSA for 2 h at room temperature, and probed with various primary antibodies at 4°C overnight. After being washed three times with TBST at intervals of 10 min, membranes were incubated with horseradish peroxidase-conjugated secondary antibodies for 1 h at room temperature. After three times of washing, the immunoreactive bands were visualized using chemiluminescent substrate of SuperSignal West Pico (Thermo, U.S.A.) and were further quantified using ImageJ software (National Institutes of Health, U.S.A.).
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8

Western Blot Analysis of Autophagy Markers

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NIH/3T3 cells were cultured and treated as described above. After protein extraction, the target protein was quantified by the BCA protein assay kit (Wanleibio, China), heated at 100°C for 5 min to denature, and stored at −20°C. The protein was separated in 10% sodium dodecyl sulfate-polyacrylamide gel (SDS-PAGE) (Wanleibio, China) and then transferred onto a 0.45-μm PVDF membrane via electrophoresis in Tris-glycine buffer (Solarbio Biotechnology, China). The PVDF membrane was blocked in Tris-buffered saline containing 0.05% Tween-20 (TBST) with 5% skimmed milk powder at room temperature for 1 h, followed by incubation with AKT, p-AKT, mTOR, p-mTOR, GAPDH, Beclin-1, p62, LC3-I, and LC3-II primary antibodies for overnight at 4°C. Then, the PVDF membrane was washed with TBST and incubated with a secondary antibody at room temperature for 1 h. Finally, after washing with TBST, the membrane was exposed and imaged using the ECL chemiluminescence kit (Beyotime, China). HRP-conjugated affinipure goat antirabbit IgG was sourced from Wanleibio (China).
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9

Western Blotting of IL-17 Pathway Proteins

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Western blotting was used to measure the IL-17 pathway-related target proteins. The total proteins of lung tissue were extracted by whole-cell lysis assay, and the supernatant protein content was determined using a BCA protein assay kit (Wanlei, Liaoning, China). The membranes were incubated overnight on a shaker at 4°C with primary antibodies against β-actin (1:5000 dilution), TRAF6 (1:500 dilution), CIKS (Act1), NFκB (p65), AP1 (c-jun), and C/EBPβ (1:1000 dilution). All the primary antibodies were purchased from Bioss Bioscience Inc., Beijing, China. Secondary anti-mouse and anti-rabbit IgG peroxidase was used for 1 h, and then bound immune complexes were detected using enhanced chemiluminescence (ECL) detection. The protein bands were analyzed by densitometry using Image J (Ver 1.42, National Institutes of Health, United States).
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10

Quantifying MyoD and MAFbx-1 Protein Levels

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The protein levels of MyoD and MAFbx-1 were determined with western blotting analysis. Proteins from muscle specimens were extracted using RIPA lysis buffer (Wanleibio Co, China), and the protein concentrations were measured using a BCA protein assay kit (Wanleibio Co, China). Later, the equivalent protein was separated on 12% polyacrylamide electrophoresis gel and transferred onto polyvinylidene fluoride (Millipore) membranes. The membranes were blocked with 5% skim milk dissolved and TBST (tris-buffered saline and Tween 20) for 0.5 h at 20–25 °C. Subsequently, the membranes were incubated with rabbit anti-MyoD antibody (1:5000; Beyotime), rabbit anti-MAFbx-1 antibody (1:2000; Beyotime) and rabbit anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) antibody (1:8000; Beyotime) at 4 °C for 12 h. The following day, the membranes were washed in TBST five times for 3 min and incubated with peroxidase-conjugated affinity-purification goat anti-rabbit IgG-HRP (1: 10,000; Beyotime), as the secondary antibody, for 1 h at 20–25 °C. The membranes were evaluated with a chemiluminescence system, and bands were quantified using Image J to analyze pixel density. The protein levels of MyoD and MAFbx-1 were normalized with those of GAPDH.
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