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2 protocols using deuterium oxide 99.9

1

Preparation of Phosphate Buffer in D2O

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Deuterium oxide 99.9%, sodium dihydrogenphosphate hydrate (NaH2PO4·H2O), disodiumhydrogen phosphate dihydrate (Na2HPO4·H2O2), and 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid sodium salt (TSP) were purchased from Sigma-Aldrich (Milan, Italy). Deuterated EDTA d-16 98% was obtained from Product Cambridge Isotope Laboratories, Inc.
Phosphate buffer solution was prepared as follows: 49.7 mg of sodium dihydrogenphosphate hydrate (0.36 mmol), 202.9 mg of disodium hydrogen phosphate dihydrate (1.14 mmol), and 0.92 mg deuterated EDTA d-16 (0.003 mmol) were dissolved in 10 mL of water. The pH was checked at 7.1. The solution was distributed into 5 mL aliquots and then lyophilized. Each aliquot was dissolved in about 1 mL of D2O and lyophilized again. Finally, the buffer was dissolved in 5 mL of deuterium oxide with 0.002% TSP (12 mM).
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2

Factor Xa Chromogenic Substrate Assay

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Chromogenic substrate CH3SO2‐(D)‐CHG‐Gly‐Arg‐pNa (Pefachrome FIXa) was obtained from Pentapharm and S‐2765 containing the thrombin inhibitor I‐2581 was from Chromogenix. H‐Glu‐Gly‐Arg‐chloromethylketone (EGRck) was from Bachem. Calcium chloride 1 M solution and deuterium oxide 99.9% were from Sigma‐Aldrich. Ultrapure urea, Molecular Biology grade 5 M NaCl solution, and Tris‐HCl were from Invitrogen. Chicken egg L‐α‐phosphatidylcholine (PC) and porcine brain L‐α‐phosphatidylserine were from Avanti Polar Lipids Inc. N‐2 hydroxyethylpiperazine‐N’‐ethanesulfonic acid (HEPES) was from Serva. Tris(2‐carboxyethyl)phosphine hydrochloride, the TMTduplex Isobaric Tagging kit, Zeba Spin columns (7 K, 0.5 mL), and chymotrypsin were from Thermo Scientific. All other chemicals were from Merck (Darmstadt, Germany).
Images of crystal structures were processed in PyMol v2.4 supplied by Schrӧdinger. Peaks 7.0 software was used for peptide identification was from Bioinformatics Solution Inc. Deuteration level percentages were calculated using HDeXaminer 2.2.0 software (Sierra Analytics).
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