The largest database of trusted experimental protocols

Nbt bcip substrate

Manufactured by Thermo Fisher Scientific
Sourced in United States

NBT/BCIP substrate is a chromogenic substrate used for the detection and visualization of enzymatic activity in various biological applications, such as immunohistochemistry, in situ hybridization, and Western blotting. It produces a blue-purple precipitate upon enzymatic conversion, allowing for the localization of target molecules.

Automatically generated - may contain errors

19 protocols using nbt bcip substrate

1

NP-Specific ASC Quantification Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
NP-specific antibody secreting cells (ASCs) were measured in 96-well flat-bottom EIA/RIA high-binding plates coated overnight at 4°C with 5μg/ml NP-BSA diluted in PBS. Plates were washed 3× (PBS, 0.1% Tween 20) followed by blocking (PBS, 1% BSA) for minimum of 2 hours at room temperature. Cells were isolated from the spleen 7 days after immunization and seeded in duplicate at a starting density of 107 total viable cells per 100μl in the first well, and twofold serial dilutions were performed down the plate. Cells were incubated at 37°C in 5% CO2 for 6 hours in complete RPMI (Sigma-Aldrich). Plates were then washed 2× with ddH2O for 5 minutes at room temperature followed by 3× wash (PBS, 0.1% Tween 20). Secreted antibodies were detected by incubating plates with an isotype-specific AP-conjugated goat anti-mouse Ig (Southern Biotech) diluted in blocking buffer for 1 hour at room temperature. After 5× washes the plates were developed overnight at 4°C with BCIP/NBT substrate (Life Technologies). Plates were washed 2× with ddH2O and allowed to dry at room temperature. The plates were scanned using elispot machine (CTL Immunospot) and the developed spots were counted visually from the scanned images.
+ Open protocol
+ Expand
2

Chronic Salmonella Infection CD4+ T Cell Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
129X1/SvJ mice were infected with 108 colony forming units of Salmonella enterica serovar Typhimurium strain SL1344 by oral gavage to establish a chronic persistent infection. After 60 days of infection, CD4+ T cells from spleens and mesenteric lymph nodes were isolated by positive selection using anti-CD4+ magnetic beads (Miltenyi biotech), and infection status was confirmed by plating a portion of the flow through onto MacConkey agar with 100 μg/mL streptomycin. Purified CD4+ T cells were cultured overnight with irradiated splenocytes from naiv̈e syngeneic mice and candidate peptides at a concentration of 20 μM and analyzed for the presence of IFN-γ-producing cells by ELISPOT. The ELISPOT was adapted from a published protocol.26 (link) In brief, 96-well MultiscreenHTS filter plates (EMD Millipore) were coated with unlabeled antimouse IFN-γ (clone AN-18; eBioscience). After washing, the cells and peptides were added to each well in triplicate and incubated overnight at 37 °C. The following day, plate-bound cytokines were detected with biotinylated anti- IFN-γ (Clone R4–6A2; eBioscience), followed by streptavidin- alkaline phosphatase (Life Technologies) and developed with BCIP/NBT substrate (Life Technologies). Spots were counted using an ImmunoSpot S6Micro Analyzer and ImmunoSpot software (Cellular Technology Limited)
+ Open protocol
+ Expand
3

Western Blot Analysis of Signaling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lysates were prepared in standard NP-40 lysis buffer (Abcam, USA) supplemented with proteinase and phosphatase inhibitors. Protein lysates were then quantified using the Pierce BCA protein assay kit (Thermo Fisher Scientific, USA). Equal masses of total protein were separated on 4–12% SDS-polyacrylamide mini-gels and blotted onto PVDF membrane (Millipore, USA). Membranes were subsequently blocked, incubated with primary antibodies, and incubated with secondary antibodies according to WesternBreeze Chromogenic Kit (Thermo Scientific, USA). Alkaline phosphatase was detected on the PVDF membranes using a ready-to-use BCIP/NBT substrate (Thermo Scientific, USA) for ready visualization of enzyme-linked antibodies. Rabbit anti-p65, anti-phospho-p65, anti-GAPDH, and anti-TBP antibodies were obtained from Cell Signaling (USA) or Abcam (USA).
+ Open protocol
+ Expand
4

Western Blot Analysis of Signaling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lysates were prepared in standard NP-40 lysis buffer (Abcam, USA) supplemented with proteinase and phosphatase inhibitors. Protein lysates were quantified using the Pierce BCA protein assay kit (Thermo Fisher Scientific, USA). Equal masses of total protein were separated on 4–12% SDS-polyacrylamide mini-gels, and blotted onto PVDF membranes (Millipore, USA). Membranes were subsequently blocked, incubated with primary antibodies, and incubated with secondary antibodies according to WesternBreeze Chromogenic Kit (Thermo Scientific, USA). Alkaline phosphatase was detected on the PVDF membranes using a ready-to-use BCIP/NBT substrate (Thermo Scientific, USA) for ready visualization of enzyme-linked antibodies. Rabbit anti-STAT1(149943), anti-phospho-STAT1(76493), anti-STAT3(91393), anti-phospho-STAT3 (9131), anti-phospho-ERK(19762), and anti-GAPDH (2118) antibodies were obtained from Cell Signaling (USA). Quantification of relative intensities was achieved by ImageJ analysis.
+ Open protocol
+ Expand
5

Western Blot Analysis of PI3K and ERK

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lysates were prepared in standard NP-40 lysis buffer (Abcam, USA) supplemented with proteinase and phosphatase inhibitors. Protein lysates were quantified using the Pierce BCA protein assay kit (Thermo Fisher Scientific, Waltham, MA, USA). Equal masses of total protein were separated on 4–12% SDS-polyacrylamide mini-gels and blotted onto PVDF membranes (Millipore, Burlington, MA, USA). Membranes were subsequently blocked, incubated with primary antibodies, and incubated with secondary antibodies, according to WesternBreeze Chromogenic Kit (Thermo Scientific, Waltham, MA, USA). Alkaline phosphatase was detected on the PVDF membranes using a ready-to-use BCIP/NBT substrate (Thermo Scientific, USA) for ready visualization of enzyme-linked antibodies. Rabbit anti-PI3K, anti-phospho-PI3K, anti-ERK, anti-phospho-ERK, and anti-GAPDH antibodies were obtained from Cell Signaling (USA). Quantification of relative intensities was achieved by ImageJ analysis.
+ Open protocol
+ Expand
6

Protein Validation via Tricine SDS-PAGE

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein validation was analyzed using Tricine SDS-PAGE for final acrylamide concentration at 14%, and stained with Silver Stain Kit (Pierce, USA). The protein was loaded with Tricine Sample Buffer (Novex, Thermo, USA) by 1:2 ratios, respectively. Protein detection was carried out by immunoblotting in accordance with the standard protocol described previously [21] . Protein fusions in polyacrylamide gel were transferred into nitrocellulose membrane, and hybridization signals were detected using polyclonal anti-mouse IFN-2b (Abcam, USA) at a dilution of 1:1000. The Horse-Peroxidase anti-mouse IgG (Promega) was used to detect specific binding. The protein-antibody bindings were visualized using BCIP/NBT substrate (Thermo Scientific, USA).
+ Open protocol
+ Expand
7

Seroreactivity Profiling of Sm-TSP-2 Antigen

Check if the same lab product or an alternative is used in the 5 most similar protocols
To qualitatively discern the reactivity of subjects’ sera with Sm-TSP-2, Western blot screening was performed with a selected set of blinded samples. Recombinant Sm-TSP-2 [13 (link),14 (link),18 (link)] was loaded (2 μg) under non-reducing and reducing (with addition of 2-mercaptoethanol, βME) conditions on a 4–20% SDS-PAGE gel (Invitrogen) at 135 V for 80 min. An irrelevant control recombinant protein (Na-GST-1, also expressed in a Pichia Pink system) was loaded as a negative control. Gels were then either stained with SimplyBlue™ (Thermo) or transferred on to 0.2 μm nitrocellulose membranes for 60 min at 30 V. Following transfer, the blots were stained with Ponceau S (Sigma) to confirm protein transfer and protein loads, followed by blocking with 2% milk diluted in 1X-PBST-20 (0.05%). Serum samples were then diluted at 1:100 in blocking buffer and incubated for 60 min at room temperature. Blots were washed 3 times with 1X-PBST-20 (0.05%) and then incubated with alkaline phosphatase secondary antibody, goat antihuman IgG (Southern Biotech) at a dilution of 1:1000 in blocking buffer. Following subsequent 3 washes with 1X-PBST-20 (0.05%), the blots were developed for 15 min with BCIP/NBT substrate (Invitrogen), then stopped with multiple washes with ultra-pure water. Blots were scanned together on a flatbed scanner (Epson) for visual documentation.
+ Open protocol
+ Expand
8

ELISpot Assay for Th Cell Responses

Check if the same lab product or an alternative is used in the 5 most similar protocols
The ELISpot protocol for detecting Th responses after a protein vaccination was developed previously.61 (link) Briefly, plates were coated overnight with anti-IFNγ, anti-IL-2 or anti-IL-4 antibody (BD Bioscience). 14 days after vaccination with rED44Her2, rED44Her2-FrC or the irrelevant control vaccine (plant expressed 5T33 Ig, not fused to FrC) spleens were processed. Following lymphoprep density centrifugation lymphocytes were plated at 2.5 × 105 per well in RPMI 1640 media supplemented with 10% FCS, 1 mM sodium pyruvate, 2 mM glutamine, 1% non-essential amino acids, 50 U/mL penicillin, 50 µg/mL streptomycin and 50 µM β-mercaptoethanol. The cells were restimulated in vitro with media alone, 10 µg/mL rED44Her2, 10 µg/mL FrC or 10 µg/mL control protein (EndoGrade Ovalbumin, Hyglos GmbH). Following 40 h of restimulation, cytokine secretion was detected using cytokine-specific biotinylated antibodies, and then streptavidin-ALP (MAbtech AB). Spots were revealed using BCIP/NBT substrate (Invitrogen) and enumerated using an ELISpot microplate reader (AID GmbH). The non-specific media alone background was subtracted, and the response considered positive if the number of spots was more than twice that of the control mice or to the control protein, whichever was highest.
+ Open protocol
+ Expand
9

Characterization of Dengue Virus E Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Purified rE proteins were subjected to SDS-PAGE and analyzed by Western Blot (WB) and Coomassie Brilliant Blue (CBB) staining. 500 ng of DENV1 rE and 1μg of DENV2, 3 and 4 rE was added to a denaturing gel loading buffer containing SDS. Separated protein fraction were transferred to a nitrocellulose membrane and blocked overnight at 4°C with TBS+3% Skim Milk + 0.05% Tween-20. Next, the membranes were treated with 0.5 μg/ml 1M7 human mAb in blocking buffer for 1 hr at 37°C. After washing, the membranes were subjected to 1:1000 diluted AP-conjugated anti-human IgG for 1 hr at 37°C and membranes were subsequently washed. Finally, membranes were developed using NBT/BCIP substrate (ThermoScientific) and the reaction was terminated in MilliQ water.
+ Open protocol
+ Expand
10

ELISpot Assay for IgG Antibody Secreting Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
ELISpot for total IgG antibody secreting cells was performed as described previously (38 (link)). In brief, Milipore multiscreen plates (Milipore, MA) were coated with 2 μg/mL Goat Anti-mouse Ig (Southern Biotech). The following day, plates were washed and blocked with complete medium. CD19 magnetic bead (Miltenyi) enriched B cells (50,000 cells) were added to the plate and incubated for 18 hours at 370C and 5% CO2. Standard procedures using biotinylated anti-mouse IgG (Sigma) was followed with streptavidin-ALP (mABTech), and assay was developed using NBT/BCIP substrate (Thermo-Scientific), and analyzed using CTL Immunospot 5.0 software (Cellular Tech Ltd.). Data are represented as IgG antibody secreting cells (ASC) spots per 106 cells (IgG ASC/106 cells).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!