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Blocking reagent

Manufactured by Bio-Rad
Sourced in United States

Blocking reagent is a laboratory product used to prevent non-specific binding in immunoassays and other protein-based experiments. It functions by occupying non-specific binding sites on membranes or solid surfaces, thereby reducing background signal and improving the specificity of the targeted analyte detection.

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7 protocols using blocking reagent

1

Western Blot Analysis of NF-κB Signaling

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Cells were lysed in fresh cell lysis buffer (Cell Signaling Technology, Boston, MA, USA) containing 1 μM PMSF, and HALT protease and phosphatase inhibitors (Thermo Scientific, Carlsbad, CA, USA). Twenty micrograms of protein from each sample was resolved on a 12.5% SDS-PAGE and transferred to a polyvinylidene difluoride membrane. After blocking with 5% blocking reagent (BioRad, Hercules, CA, USA) in Tris-buffered saline with 0.5% Tween-20 (TBS-T), the membrane was incubated overnight at 4 °C with either anti-NF-κB p65 (C22B4), anti-phospho-NF-κB p65 (Ser536), or β-actin (8H10D10) primary antibody (Cell Signaling Technology, Boston, MA, USA), followed by incubation with HRP-conjugated anti-rabbit secondary antibody for 2 h at room temperature. Signals were then detected by exposure to X-ray films after the addition of ECL substrate. Densitometry analysis was done using the ImageJ v1.47 (National Institutes of Health, Bethesda, Md, USA) software.
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2

NFκB Phosphorylation Analysis by Western Blotting

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Protein concentration was determined by the BCA assay and 10-μg of protein was resolved on a 4–12 % Bis-Tris SDS-PAGE gel (Life Technologies) and transferred to PVDF membrane (Bio-Rad). Immunoblotting was performed using anti-phosphorylated NFκB p65 subunit (Cell Signaling Technology, Danvers, MA) and anti-vinculin (Sigma) antibodies diluted in 5 % Blocking Reagent (Bio-Rad) in Tris-buffered saline and 0.1% Tween 20 (TBS-T). After washing with TBS-T, membranes were probed with horseradish peroxidase-conjugated goat anti-rabbit secondary antibody (Amersham Biosciences, Piscataway, NJ). The membranes were then incubated with ECL Western Blotting Detection reagent (Pierce, Rockford, IL) and processed on Kodak BioMax XAR X-ray film (Fisher). Densitometry was performed using ImageJ.
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3

Western Blot Analysis of Protein Lysates

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The cells were washed once with phosphate-buffered saline (PBS) and then lysed in cold lysis buffer (50 mM TrisHCl, pH 7.4, 150 mM NaCl, 1% Triton X-100, 0.1% SDS, 1 mM EDTA, 1 mM Na3VO4, 1 mM NaF, and 1× protease inhibitor cocktail). Cell lysates were centrifuged at 14,000 × g for 15 min at 4°C and then boiled in 5× sample buffer following protein determination (BSA, #23208; Thermo Fisher Scientific, USA). The protein samples were subjected to western blotting analysis. For western blotting analysis, nitrocellulose membranes (#1620145; Bio-Rad, USA), blocking reagent (5% skim milk, 1 h, room temperature), and precasting gels (#456-1095; Bio-Rad) were used with the indicated antibodies at a 1:1,000 dilution ratio. The samples were stained with rabbit anti-EHMT1 antibody (A301-642A; Bethyl Laboratories, USA), mouse anti-CHOP antibody (#2895; Cell Signaling Technology, USA), rabbit anti-PARP antibody (#9542; Cell Signaling Technology) and mouse anti-ACTB antibody (SC-47778; Santa Cruz Biotechnology, USA) at 4°C (overnight). Secondary antibodies (rabbit: SC-2357, mouse: SC-516102; Santa Cruz Biotechnology) were incubated at room temperature for 1 h, and ECL solution (#170-5060; Bio-Rad) was used for visualization.
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4

Polysaccharide-Binding Antibody Assay

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Nitrocellulose membranes were spotted with 5 µL of each coating mAb (0.45 mg/mL in PBS). To block additional protein-binding sites, the membrane was incubated overnight at 4° C with PBST containing 5 % blocking reagent (BioRad) with shaking. The membrane was cut to separate the original mAb spots. Each of the resulting nitrocellulose discs were then separated in one of 12 wells of a cell culture plate (Costar). Each well was filled with 500 µL of the specific polysaccharide diluted to 25 µg/mL in PBST/3 % blocking reagent. The plate was incubated for 2 h at RT with mild shaking. The specific biotinylated monoclonal antibody diluted 1:100 in 500 µL PBST/3 % blocking reagent, was added to each well followed by incubation at RT for 1 h with shaking. After extensive washing, the plate was incubated for 45 min with 500 µL of horseradish peroxidase-conjugated streptavidin (Thermo Scientific) diluted 1:5000 in PBST/3 % blocking reagent. The blot was developed using the SuperSignal West Pico Chemiluminescent Substrate (Thermo Scientific) following manufacturer instructions.
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5

Protein Extraction and Western Blot Analysis

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Protein lysates were obtained by homogenizing the pancreatic and brain tissues (whole brain tissue) with T-PER (Tissue-protein extraction lysis solution) (50 mg/500 μl lysing solution) along with 10 μl protease inhibitor cocktail and 10 μl phosphatase inhibitor. Homogenization was done under ice and centrifuged at 10,000×g for 5 min to collect the debris. Protein quantification was done by Bradford assay and 40 μg of protein was loaded into the SDS-PAGE. The separated protein samples were transferred to the nitrocellulose membrane by using Bio-Rad Transblot turbo transfer system. After transfer, membrane was blocked by using 5% Bio-Rad blocking reagent. Blocked membrane was incubated with 1:1000 dilution primary rabbit antibodies (Cell Signaling Technology, USA) for 12 h at 4 °C. After treatment, the membrane washed and incubated with secondary antibody (1: 20,000) treatment for an hour. Bands were observed in the chemiluminescence document reader, after addition of Immobilon Western chemiluminescent HRP substrate at standardized exposure time. Bands of the two groups were analyzed by densitometry analysis compared to β-Actin (Major Science image analysis software).
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6

SDS-PAGE and Western Blotting Protocol

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Denaturing sodium dodecyl sulfate (SDS) was performed, as published.18 (link),55 (link) 5-20 μg protein per lane were separated on a 15% SDS polyacrylamide gels using Tris/glycine buffer using 130 V for 1.5-2 hours. Proteins were transferred onto nitrocellulose membranes using a Trans-Blot Turbo Transfer System (Biorad). Membranes were blocked with Biorad Blocking reagent, incubated with primary antibodies dissolved in 3% bovine serum albumin in Tris-buffered saline. followed by fluorescent labeled secondary antibodies (Starbright 520 and Starbright 700 from Biorad; dilution 1:10,000). Signals were detected using a ChemiDoc station from Biorad. Gel and immunoblot images were processed using Image Lab (Biorad) and Adobe Photoshop and Illustrator. Densitometry was determined using Fiji/Image J.
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7

Western Blot Analysis of Recombinant Proteins

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Protein samples were resolved on 4% to 20% Mini-Protean TGX precast protein SDS-PAGE gels (Bio-Rad Laboratories; Hercules, CA) and blotted on polyvinylidene difluoride (PVDF) membranes using the Trans-Blot Turbo transfer system (Bio-Rad). Membranes were incubated in TBS buffer containing 0.1% (vol/vol) Tween 20 (TTBS) and 5% (wt/vol) blocking reagent (Bio-Rad) with gentle shaking at room temperature for 30 min. Primary antibodies were added as described above with mouse anti-strep (Millipore Sigma no. 71590-M, 1:1,000 dilution) and mouse anti-His antibodies (Santa Cruz Biotechnology, Dallas, TX; no. SC-53073, 1:400 dilution) diluted in TTBS with 0.5% (wt/vol) blocking reagent, followed by incubation with gentle shaking at room temperature for 12 to 14 h. Membranes were washed three times with TTBS, followed by incubation (2 h at room temperature with gentle shaking) with secondary antibodies (goat anti-rabbit-HRP [Thermo Fisher Scientific no. 65-6120, diluted 1:3,000] and donkey anti-mouse-Alexa 647 [Thermo Fisher Scientific no. A-31571, diluted 1:1,000]) diluted in TTBS with 0.5% (vol/vol) blocking reagent. Membranes were washed twice in TTBS and once in TBS before Western blot detection. Blots were visualized using the Bio-Rad ChemiDoc MP imaging system.
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