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4 protocols using zinc formalin

1

Comprehensive Immunohistochemical Analysis of Lung Tissue

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Mice were sacrificed by CO2 asphyxiation and lungs were inflated with 10% zinc formalin (Polysciences Inc.), fixed overnight in zinc formalin at RT, then transferred to 70% ethanol until paraffin embedding. IHC was performed on 5 μm thick sections using ABC Vectastain kit (Vector Labs) with antibodies to CD31 (Dianova, DIA-310), GFP (Cell signaling 2956), CD3 (Abcam, ab5690), B220 (Biolegend, 103202), MPO (Thermo Scientific, #RB-373-A0), IbaI (Wako), cleaved caspase 3 (Cell signaling 9661), KI67 (Vector Labs, VP-RM04) and SMA (Sigma Aldrich, A5228). The staining was visualized with DAB (Vector Labs, SK-4100) and slides were counterstained with hematoxylin. For the apoptosis and proliferation analysis, quantitation was performed using ImageJ to determine the percentage of Ki67-positive cells and the number of cleaved caspase 3-positive cells per tumor area.
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2

Bleomycin-Induced Pulmonary Fibrosis in Mice

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Six‐ to eight‐week‐old C57BL/6J mice were purchased from the Jackson Laboratory (Bar Harbor, Maine). Mouse experiments were approved by the MUSC IACUC. Pulmonary fibrosis was induced in mice following intratracheal administration of 1.2 mU/g bleomycin mixed with 10 µg rhIGFBP‐4 or vehicle in a volume of 50 µL. rhIGFBP‐4 or mutant IGFBP‐4 were administered to different mice on days 0, 3, and 6 post‐bleomycin for a total of three doses. On day 21, mice were euthanized and lungs were gently perfused with 1X PBS. The left lung was collected for hydroxyproline assay. The right lung was further perfused with 10% zinc formalin fixative (Polysciences Inc, Warrington, PA) and fixed in 10% zinc formalin for 48 hours prior to paraffin embedding and histological analysis.
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3

Histological and Immunohistochemical Analysis of Distal Colon

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For histological analysis, 0.5 cm distal colon was fixed in Zinc Formalin (Polyscience Inc.) for 3 hours and then embedded in paraffin blocks. We then prepared 5 μm paraffin cross-sections, which were used for hematoxylin and eosin (H&E) staining (Mayer’s Hematoxylin solution, 1% Eosin Solution, Wako) following standard procedures. The histological images were captured using the BX51-P Polarizing microscope (Olympus) and processed with the Olympus D.P. Controller 2002 software.
For immunohistochemistry analysis, 0.5 cm distal colon was fixed overnight in 4% paraformaldehyde (PFA) (Wako) at 4°C and mounted in embedding medium Tissue-Tek O.C.T Compound (Sakura). The tissues were cut into 8 μm sections and permeabilized with 0.2% saponin (Nacalai Tesque) in PBS. The sections were then blocked with 5% goat serum (Wako) for Mucin 2 detection. Subsequently, the sections were stained with anti-Mucin2 (1:200, rabbit, clone: H-300, Santa Cruz Biotechnology) at 4°C overnight. For the second antibody, Alexa Fluor 488 conjugated donkey anti-rabbit IgG antibody (1:400, Thermo Fisher Scientific) was used with DAPI (1:1000, Dojindo). The sections were assessed using the Leica TCS SP8 (Leica Microsystems).
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4

Visualizing Immune Cells in Adipose Tissue

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Whole mounts of AT from tdTomato (TDTO) reporter mice were used to visualise presence of CD3-and CD4-positive cells in AT. For that purpose, epididymal AT was immediately fixed after sacrifice for 20 min in zinc formalin (Polysciences, Hirschberg, Germany), washed in PBS and cut into small pieces (<1 mm 3 ). These AT pieces were then washed in PBS, blocked with staining buffer (3% bovine serum albumin (BSA) in PBS) for 1 hour at room temperature and stained with pre-labeled antibodies in staining buffer (anti-CD3-PE-Cy7; 1:100 145-2C11; Bi-oLegend or anti-CD4-AF647; 1:100; RM4-5; BioLegend) overnight. We used Hoechst
(1:10,000 in PBS; Life Technologies) to stain the nuclei. AT pieces were then washed three times in PBS and subsequently transferred into cavities of microscope slides and mounted using Fluorescence Mounting Medium (Dako; Hamburg; Germany). AT was studied using the Olympus FV1000 confocal microscope.
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