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Anti cxcr4

Manufactured by Novus Biologicals
Sourced in United States

Anti-CXCR4 is a lab equipment product that targets the CXCR4 protein. CXCR4 is a chemokine receptor that plays a role in various cellular processes. This product is designed to be used in research applications involving the study of CXCR4 and related biological mechanisms.

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6 protocols using anti cxcr4

1

Immunohistochemical Analysis of CXCR4 in TNBC

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De-identified human triple negative breast cancer specimens were obtained from the Tissue Procurement Core of Siteman Cancer Center under the approval from Human Research Protection Office of Washington University. The Tissue Procurement Core consented the patients for using their biospecimens for research projects. In cased where consent was not obtainable, the Tissue Procurement Core has an Institutional Review Board issued waiver of consent, under which tumor tissues may be used anonymized biospecimens for non-genomic based studies. Paraffin embedded sections were deparaffinized in xylenes and rehydrated through a series of graded alcohols. Tissues were processed for antigen retrieval by boiling in citrate buffer (pH 6.0 containing 0.1% Tween). They were blocked in 10% donkey serum for 2 h to prevent nonspecific binding. The sections were then incubated overnight at 4 °C in primary antibody (anti-CXCR4, Novus Biologicals 1:400) or control IgG (anti-rabbit IgG, Novus Biologicals, 1:400). Anti-rabbit secondary antibody was applied (Jackson Laboratories) for 1 h at room temperature, and sections were washed in PBS, mounted in DAPI mounting medium (Vector Laboratories), and imaged using a Zeiss Confocal microscope system.
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2

Immunohistochemistry of CXCR4 in Paraffin Sections

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Paraffin embedded tumor sections were deparaffinized in xylenes and rehydrated through a series of graded alcohols. After quenching endogenous peroxidase activity in 3% hydrogen peroxide, antigen retrieval was performed by boiling the slides in citrate buffer (pH 6.0 containing 0.1% Tween). After incubation in blocking serum for 1 h to prevent nonspecific binding (Vectastain; Vector Laboratories), the sections were further incubated overnight at 4°C with primary antibody (anti-CXCR4, Novus Biologicals 1:2000) or control IgG (anti-rabbit IgG, Novus Biologicals 1:2000). After applying secondary antibody (Vector Laboratories), the addition of diaminobenzidine develop a brown color. The sections were counterstained in hematoxylin, and digital images of the stained sections were collected using a Zeiss Light Microscope system.
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3

Protein Expression Analysis in Cellular Signaling

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A total protein extraction kit (KeyGEN) was used for protein extraction. The extracted proteins (20 to 25 µg/well) were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and the gel-separated proteins were electroblotted onto nitrocellulose membranes. Next, the membranes were blocked with 3% bovine serum albumin for 2 h. Then, they were incubated with anti-Beclin1 (1:1000; Cell Signaling Technology, Danvers, MA, USA), anti-LC3 (1:1500; Novus Biological), anti-SDF-1 (1:1000; Cell Signaling Technology), anti-CXCR4 (1:5000; Novus Biological), anti-collagen II (COL2) (1:5000; Abcam, Cambridge, USA), anti-aggrecan (AGG) (1:1000; Novus Biological), and anti-β-actin (1:1000; Cell Signaling Technology) antibodies at 4 °C overnight. After being washed, the blots were treated with a goat antimouse secondary antibody (1:5000; Santa Cruz, Dallas, TX, USA) at room temperature for 2 h. Following 3 washes, the blots were developed with an enhanced chemiluminescence substrate (ECL kit; KeyGEN).
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4

Immunofluorescence Staining of Muscle and Rectal Tissues

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Frozen skeletal muscle and rectal tissue sections were fixed in 4% paraformaldehyde, washed in phosphate-buffered saline (PBS), and permeabilized with 0.3% Triton X-100 in PBS. Nonspecific binding was blocked by incubating sections with 10% (w/v) bovine serum albumin (BSA; Dako Cytomation, Santa Clara, CA, USA) in PBS for 15 min. The slices were subsequently incubated with anti-GFP (Abcam, Cambridge, UK), anti-CXCL12 (Proteintech, Rosemont, IL, USA), and anti-CXCR4 (Novus Biologicals, Centennial, CO, USA) for 2 h at a concentration of 5.0, 1.0, or 1.0 µg/mL. Next, the sections were incubated with fluorescence-labeled secondary antibody; for anti-GFP, Alexa 488 (Thermo Fisher Scientific, Waltham, MA, USA) was used; and for anti-CXCL12 and anti-CXCR4, Alexa 594 was used. Next, the sections were incubated with 4′,6-diamidino-2-phenylindole (DAPI) for 30 min. After washing, the stained slices were mounted using the ProLong Diamond Antifade Mountant (Thermo Fisher Scientific). Images were taken using BZ-X700 (Keyence, Tokyo, Japan).
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5

Proteomic Analysis of m6A Regulators

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Cell lysates were obtained using RIPA buffer (Pierce) containing inhibitors for proteases and phosphatases. Protein abundance were then analyzed by SDS-PAGE, and transferring onto nitrocellulose membranes followed by immunoblotting. Antibodies used are as follows:
Anti-ALKBH5 (Millipore Co., ABE 1013, 1:2000); anti-Beta-actin (Santa Cruz, SC-47778, 1:5000); anti-CXCR4 (Santa Cruz, SC-53534, 1:200); anti-CXCR4 (Novusbio, NBP1-77067SS, 1:5000); FTO (Santa Cruz, SC-271713, 1:200); GAPDH (Santa Cruz, SC-47724, 1:5000); GFP (Cell Signaling Technology, 2555S, 1:1000); LC3B (Cell Signaling Technology, 3868S, 1:1000); METTL14 (Millipore Co., ABE 1338, 1:1000); METTL3 (Proteintech, 15073-I-AP, 1:1000); p62 (Progen Biotechnik GmbH, GP62-C, 1:10,000); p70s6K (Cell Signaling Technology, 2708S, 1:2000); PD-1 (Proteintech, 66220-I-Ig, 1:5000); p-p70s6K (Cell Signaling Technology, 9234S, 1:1000); and SOX10 (Santa Cruz, SC-365692, 1:2000). The unprocessed blots are provided in Source Data.
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6

Western Blot and qRT-PCR for CXCR4

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Western blotting was undertaken as described in Xin-Wei Diao et al. [5 ]. The antibodies used in this study include anti-CXCR4 (Cat#NB100-74396SS, Novus Bio., Littleton, CO, USA) and anti-β-Actin (Cat#sc-47778, Santa Cruz Biotech, Dallas, TX, USA).
For qRT-PCR, the total RNA of the cell was extracted via the traditional phenol–chloroform method and reverse-transcribed using a PrimeScript RT Reagent Kit from Takara, Japan (Cat# RR037B). Then, cDNA was quantified via PCR with a 7500 Fast Real-Time PCR System from Thermofisher, USA (Cat#4351107) using SYBR Premix Ex Taq from Takara, Japan (Cat#RR420). The forward primer for CXCL12 is 5′-TGCATCAGTGACGGTAAACCA-3′, and the reverse primer is 5′-TTCTTCAGCCGTGCAACAATC-3′. The forward primer for CXCR4 is 5′-ACTACACCGAGGAAATGGGCT-3′, and the reverse primer is 5′-CCCACAATGCCAGTTAAGAAGA-3′.
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