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2 protocols using lactococcus lactis

1

Microbial Isolate Cultivation and Storage

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A lyophilized stock of the organisms was obtained from the American Type Culture Collection (ATCC). The commensal bacteria Lactobacillus rhamnosus (ATCC 7469), Lactococcus lactis (ATCC 11454), Enterococcus faecium (ATCC 6057), and the microorganisms causing opportunistic infections Escherichia coli (ATCC 25922) as well as Candida albicans (ATCC 64548) and Candida glabrata (ATCC 15126) isolates were used in the present study. All isolates were previously purchased in MicroSwab form from Merck (Warsaw, Poland). The bacterial and fungal isolates were freshly cultivated on Tryptone Soy Broth (TSB) (Merck, Poland) before the experiments and also stored in TSB with 20% glycerol at − 70 °C until needed. The bacteria were routinely cultured on TSB (pH 7.3) for 2 days at 37 °C and the fungi were cultured on Sabouraud broth (pH 5.8) for 6 days at 24.5 °C. Sabouraud broth contains mycological peptone (10 g/L), glucose (20 g/L). All of the microorganisms were incubated in tightly closed polypropylene 12 mL Falcon tubes, in anaerobic conditions.
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2

Culturing Diverse Anaerobic Bacteria

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Bacteria strains used are either purchased from ATCC (Lactobacillus acidophilus ATCC® 4356, Lactobacillus paracasei ATCC® BAA-52, Lac-tobacillus reuteri ATCC® 23272, Lactococcus lactis ATCC® 19435, Bifidobacterium breve ATCC® 15700, Bifidobacterium longum subsp. longum ATCC® 15707, Clostridium perfringens ATCC® 13124, Ruminococcus gnavus 35913) or obtained from the Sonnenburg lab (Bacteroides fragilis NCTC 9343, Bacteroides finegoldii DSM 17565, Bacteroides dorei DSM17855, Bacteroides ovatus ATCC 8483, Lactobacillus plantarum ATCC BAA-793, Lactobacillus rhamnosus ATCC 53103).
Lactobacilli MRS Agar plate (Hardy Diagnostic, USA) was used to culture L. acidophilus, L. paracasei, L. reuteri, L. plantarum, L. rhamnosus, L. lactis. Blood Agar plate (Hardy Diagnostic, USA) was used to culture B. breve, B. longum, C. perfringens, R. gnavus. BHI agar plate (Hardy Diagnostic, USA) was used to culture B. finegoldii, B. dorei, B. ovatus, B. fragilis.
Each bacterial strain was inoculated onto the respective culture plates under sterile conditions. The plates were then placed in an air-tight gas pouch containing one pack of BD Difco GasPak EZ Gas Generating System (ThermoFisher B260683, USA) to create an anaerobic environment. The pouches were incubated at 37 °C for 48 hrs until harvest, allowing the bacteria to grow and develop.
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