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Geneart ag technology

Manufactured by Thermo Fisher Scientific
Sourced in Germany

The GeneArt AG technology is a genetic engineering tool that enables the assembly of synthetic DNA sequences. It provides a platform for the construction of custom DNA fragments, gene circuits, and genetic pathways. The technology offers a streamlined workflow for the design, assembly, and verification of synthetic DNA constructs.

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3 protocols using geneart ag technology

1

Generation of SARS-CoV-2 Spike Pseudotypes

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rVSV-luc pseudotypes were generated following a published protocol (Whitt, J Virol Methods 2010). First, BHK-21 were transfected to express the S protein of SARS-CoV-2 (codon optimized, kindly provided by J. García-Arriaza, CNB-CSIC, Spain), Ebola virus Makona Glycoprotein (EBOV-GP) (KM233102.1) was synthesized and cloned into pcDNA3.1 by GeneArt AG technology (Life Technologies, Regensburg, Germany) or VSV-G following the manufacturer’s instructions of Lipofectamine 3000 (Fisher Scientific). After 24 h, transfected cells were inoculated with a replication-deficient rVSV-luc pseudotype (MOI: 3–5) that contains firefly luciferase instead of the VSV-G open reading frame, rVSVΔG-luciferase (G*ΔG-luciferase) (Kerafast, Boston, MA). After 1 h incubation at 37°C, cells were washed exhaustively with PBS and then DMEM supplemented with 5% heat-inactivated FBS, 25 μg/mL gentamycin and 2 mM L-glutamine were added. Pseudotyped particles were collected 20–24 h post-inoculation, clarified from cellular debris by centrifugation and stored at -80°C [20 (link),21 (link),95 (link)]. Infectious titers were estimated as tissue culture infectious dose per mL by limiting dilution of rVSV-luc-pseudotypes on Vero E6 cells. Luciferase activity was determined by luciferase assay (Steady-Glo Luciferase Assay System, Promega).
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2

Generation of rVSV-luc Pseudotypes

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rVSV-luc pseudotypes (PSV) were generated following a published protocol (Whitt, 2010 (link)). First, BHK-21cells were transfected using Lipofectamine 3000 (Fisher Scientific) to express the different viral envelope glycoproteins: Ebola virus Makona Glycoprotein (EBOV-GP, GenBank KM233102.1) and S protein of MERS-CoV (NC_019843) were synthesized and cloned into pcDNA3.1 by GeneArt AG technology (Life Technologies, Regensburg, Germany); S protein of SARS-CoV-2 (codon-optimized; kindly provided by J. García-Arriaza, CNB-CSIC, Spain) or S protein of SARS-CoV (SinoBiological, Cat: VG40150-G-N) were cloned into a pCMV/hygro vector. After 24 h, transfected cells were inoculated with a replication-deficient rVSV-luc pseudotype (MOI: 3–5) (Kerafast, Boston, MA). After 1 h incubation at 37°C, cells were washed exhaustively with PBS and then DMEM supplemented with 5% heat-inactivated FBS, and 25 μg/mL gentamycin and 2 mM L-glutamine were added. PSV were collected 24 h post-inoculation, clarified from cellular debris by centrifugation, and stored at -80°C. Infectious titers were estimated as tissue culture infectious doses by limiting dilution of rVSV-luc-pseudotypes on Vero E6 cells. Luciferase activity was determined by luciferase assay (Steady-Glo Luciferase Assay System, Promega).
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3

Generation of Ebola Virus Pseudotypes for Neutralization Assays

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rVSV-luc pseudotypes were generated following a published protocol (Whitt, 2010 (link)). BHK-21 were transfected to express the Ebola virus Makona glycoprotein (EBOV-GP) (KM233102.1) synthesized and cloned into pcDNA3.1 by GeneArt AG technology (Life Technologies, Regensburg, Germany) or VSV-G with Lipofectamine 3000 following the manufacturer's instructions (Fisher Scientific).
After 24 h, transfected cells were inoculated with a replication-deficient rVSV-luc pseudotype (MOI 1–5 pfu/cell) that contain firefly luciferase instead of the VSV-G open reading frame, rVSVΔG-luciferase (G*ΔG-luciferase, Kerafast) during 1 h at 37 °C.
Next, the inoculum was removed, cells were washed 3 times with phosphate buffered saline (PBS) and finally the medium added. Pseudotyped particles were harvested 24 h and 48 h postinoculation, clarified from cellular debris by centrifugation for 10 min at 1200 r.p.m. and stored at −80 °C. Infectious titers were estimated as tissue culture infectious dose per ml by limiting dilution of each rVSV-luc virus-containing supernatants on Vero E6 cells (African green monkey cells). Luciferase activity was determined by luciferase assay (Luciferase Assay System, Promega, Madison, WI).
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