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34 protocols using p7000

1

Multi-Element Analysis of CRMs

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Sigma-Aldrich provided high purity grade nitric acid (Suprapure 65% HNO3), calcium disodium ethylene-diaminetetraacetate hydrate (EDTA-Ca-Na2), pepsin from porcine stomach mucosa (P-7000), pancreatin from porcine pancreas (P-1750), and bile extract porcine (B-6831) (St Louis, MO, USA). The National Institute of Standards and Technology (NIST), Gaithersburg, MD, USA, provided stock solutions of Se (SRM3149), CRM SRM1566b (oyster tissue), and Rh (Rh SRM3144). In addition, this study made use of CRM from the National Metrology Institute of Japan (NMIJ7402-a, codfish tissue). Merck provided potassium hydroxide (KOH, 105033), sodium bicarbonate (NaHCO3), and dialysis membrane (molecular weight cut-off 12–14 KDa, 13 mm internal diameter) (KGaA, Darmstadt, Germany). Medicell Membranes Ltd. provided flat dialysis membranes (MWCO 12–14 kDa, 15.9 mm wide) (Greenwich, London). In the study, deionized water from Milli-Q® water (Millipore Sigma, Burlington, MA, USA) was employed.
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2

Evaluating Hibiscus Bioaccesibility via In Vitro Digestion

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A Hibiscus beverage and an Hibiscus commercial drink as the control beverage were subjected to a static in vitro gastrointestinal digestion model according to Blancas-Benitez, et al. [37 (link)] to evaluate the bioaacessibility of phenolic compounds (PC). Gastric digestion was simulated by adding pepsin (P-7000, Sigma-Aldrich, 0.2 mL of a 300 mg/mL solution in 0.2 M HCl-KCl buffer, pH 1.5, 40 °C, 2 h). Pancreatin (P-1750, Sigma-Aldrich, 3 mL of a 5 mg/mL solution in 0.1 M phosphate buffer, pH 7.5, 37 °C, 2 h) was added in order to simulate the intestinal digestion. After the intestinal digestion, this fraction was used to evaluated the BC released. This method differs from other methods such as the INFOGEST protocol [38 (link)], where a dialysis bag is used for the simulation of the passive diffusivity of metabolites in the small intestine; in this study, sample dialysis bags were not used because of the type of sample. The samples from this stage were centrifuged (Hermle Z 323 K; Wehingen, Germany) (3500× g, 15 min, 4 °C), and the supernatant (digested extract) was considered as soluble indigestible fraction. The residue was considered as indigestible-fraction. Both fractions were used to identify the BC by HPLC-DAD-ESI-MS described in the section below.
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3

Preparation of Simulated Digestive Fluids

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Simulated
gastric fluid (SGF): The fluid was generated by preparing a solution
of sodium chloride (0.20 g), concentrated HCl (0.70 mL), and pepsin
(Sigma, P-7000, 0.32 g) in deionized water (95 mL). The final volume
was adjusted to 100 mL by addition of deionized water. Simulated intestinal
fluid (SIF): The fluid was generated by preparing a solution of monobasic
potassium phosphate (KH2PO4, 0.68 g), 0.1 N
aqueous sodium hydroxide (38 mL), and pancreatin (Sigma, P-1625, 1.0
g) in deionized water (57 mL). The pH of the solution was adjusted
to 7.5 by addition of 1 N aqueous sodium hydroxide, and then the final
volume was adjusted to 100 mL by addition of deionized water.
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4

In Vitro Intestinal Digestibility of Rumen Undegradable Protein

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A modified 3-step in vitro procedure described by Gargallo et al. [29 (link)] was used to determine intestinal digestibility of rumen undegradable protein (IDP). Briefly, dried duplicate undegradable residues from the 16 h in situ ruminal incubation were pooled and ground to pass through a 1-mm sieve. Six sub-samples of dried sample residues (500 mg each) were then weighed into Ankom F57 filter bags and heat-sealed. Twenty-four sample bags were incubated in each incubation jar of a DaisyII incubator (ANKOM Technology, Fairport, NY, USA) containing 2 L of 0.1 M pre-warmed HCl solution (pH = 1.9) and 1 g L−1 of pepsin (P-7000, Sigma, St. Louis, MO, USA), with constant rotation at 39 °C for 1 h. After incubation and washing, sample bags were reintroduced into the same incubation jars containing 2 L of pre-warmed pancreatin (0.5 M KH2PO4 buffer, pH = 7.75, 50 mg/kg of thymol, and 3 g/L of pancreatin (P-7545, Sigma)) and incubated with constant rotation at 39 °C for 24 h. After removal, bags were rinsed with tap water until the water ran clear, dried at 55 °C for 48 h, and reweighed. Undegradable residues from ruminal and intestinal incubations were analyzed for nutrient concentration.
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5

BrdU Incorporation Analysis by Flow Cytometry

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BrdU (Sigma #B5002) was added to cell cultures at 30 μM for 30 min. Cells were fixed with 70% ethanol overnight at 4 °C, incubated with a freshly prepared pepsin solution (Sigma #P7000) for 20 min at 37 °C and incubated with 2 N HCl solution for 20 min at room temperature. After that, cells were washed in 1 × BU buffer (0.5% normal goat serum, 0.5% Tween 20, 20 mM HEPES) and incubated for 1 h at room temperature with rat anti-BrdU antibody (Bio-Rad #0BT0030). After washing with PBS, cells were incubated for 45 min with secondary antibody (anti-rat IgG-FITC conjugate, Southern Biotech #3030–02) diluted at 1:50 in BU buffer. Cells were finally incubated with PBS containing 4 μg ml−1 RNase A and 4 μg ml−1 PI for 30 min at 37 °C and then analysed by flow cytometry on BD-FACSCanto II. At least 10,000 events were collected in each analysis. Data analysis was performed using FlowJo software.
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6

Pisum sativum Protein Digestion Assay

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Pea seeds (Pisum sativum var. Bajka) were obtained from Company of Horticulture Seeds and Nursery in Ożarów Mazowiecki, Poland. HHL (hippuryl-L-histidyl-L-leucine), pepstatin A, PMSF (phenylmethanesulfonyl fluoride), α-amylase from hog pancreas (50 U/mg, 10080, Sigma), pepsin from porcine gastric mucosa (250 U/mg, P7000, Sigma), pancreatin from porcine pancreas (P7545, Sigma), enalapril, bile extract, and TNBS (2,4,6-trinitrobenzenesulfonic acid) were purchased from Sigma-Aldrich Company, USA, and Amino Acid Standard from Pierce, USA. Any other chemicals were of analytical grade.
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7

Preparation of Pepsin and Trypsin Resistant Gliadin

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A pepsin and trypsin resistant gliadin (PT-gliadin) was prepared according to the method previously described with minor modifications [12 (link)]. Each 50 g Sigma gliadin (G-3375; Sigma, St. Louis, MO) or 50 g wheat flour was dissolved in 500 ml 0.2 N HCl for 2 h at 37 °C with 1 g pepsin (P-7000; 800–2,500 units/mg protein, Sigma, St. Louis, MO). The resultant peptic digest was further digested by addition of 1 g trypsin (P-8096, activity, 4x USP specifications; Sigma, St. Louis, MO), after pH adjusted to 7.4 using 2 M NaOH. The solution was stirred vigorously at 37 °C for 4 h, boiled to inactivate enzymes for 30 min, lyophilized, and then stored at −20 °C until used. PT-gliadin was freshly suspended in a sterile phosphate buffered saline (PBS, 0.15 M NaCl, 0.0027 M KCl, 0.0081 M disodium phosphate and 0.0015 M monopotassium phosphate, pH 7.2) to a final concentration of 1 mg/ml. PD-casein (BactoTryptone, Sparks, MD) was used as a negative control in the experiment.
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8

In Vitro Gastrointestinal Digestion of EVOOs

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The in vitro gastrointestinal digestion was based on the protocol as detailed by Minekus et al. [24 (link)]. Simulated salivary fluid (SSF), simulated gastric fluid (SGF) and simulated intestinal fluid (SIF) were prepared following the scheme previously reported [24 (link)]. In particular, the method (scaled up for 500 µL of liquid sample) included an oral phase composed of SSF at pH 7.0, with salivary α-amylase (75 U/mL; from human saliva Type IX-A, Sigma-Aldrich Co. Milan, Italy). The oral step was run at 37 °C for 2 min. Then, the oral bolus samples were mixed (ratio 1:1) with the SGF at pH 3.0 containing porcine pepsin (2000 U/mL; P7000; Sigma-Aldrich Co. Milan, Italy). The gastric phase was carried out for 120 min at 37 °C. Gastric chyme was mixed (1:1) with the SIF at pH 7.0 containing pancreatin (100 U/mL; P1750; Sigma-Aldrich Co. Milan, Italy) and bile salts (10 mM; B8631; Sigma-Aldrich Co. Milan, Italy). The intestinal phase was carried out for 120 min at 37 °C. During the in vitro digestion, appropriate amounts of HCl (1 M) and NaOH (1 M) were added for pH adjustment. At selected time points (i.e., gastric and pancreatic end-phases), corresponding digestion sample tubes for each EVOO sample were cooled on ice to stop the reaction. The experiment was performed in triplicate (n = 3) and all the in vitro digestion steps were carried out in amber bottles in the dark.
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9

In Vitro Digestion Protocol

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The gastric digestion was obtained using pepsin from porcine gastric mucosa ≥250 units/mg (Sigma #P7000), and the intestinal digestion was obtained using pancreatin from porcine pancreas 4USP (Sigma #P1750), bile extract porcine (Sigma #B8631), and a 10 KDa dialysis membrane (SnakeSkin® Dialysis Tubing, Thermo Scientific, Paisely, UK). Sodium bicarbonate was purchased from Normapur Prolabo, France. Sodium hydroxide, hydrochloric acid 6 M, potassium chloride and sodium chloride were used in the digestion and were purchased from Sigma Aldrich.
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10

Measuring In Vitro Starch Digestibility

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In vitro starch digestibility was measured according to the study of Goh et al. [16 (link)]. The cooked noodles (50 mg) homogenized in distilled water were mixed with 10 mL of HCl-KCl buffer (pH 1.5) and 0.2 mL of pepsin solution (0.1 g/mL) (P7000, from porcine gastric mucosa, 250 U mg−1, Sigma-Aldrich Chemical Co., St. Louis, MO, USA) in a shaking water bath at 40 °C for 1 h. Then, sodium acetate buffer (0.5 mol/L, pH 6.9) was added into the mixture and filled up to 25 mL, followed by the reaction with 5 mL α-amylase (2.6 IU) (10,080, from hog pancreas, 50 U mg−1, Sigma-Aldrich Chemical Co., St. Louis, MO, USA) in the water bath at 37 °C. The solution (1 mL) was taken out at 0, 15, 30, 45, 60, 90, 120 and 180 min, respectively, and the reaction was stopped in a 100 °C water bath for 5 min. The content of reducing sugar in the obtained solution was determined by DNS method, with glucose as the standard. The contents of rapidly digestible starch (RDS), slowly digestible starch (SDS) and resistant starch (RS) were defined as the fractions digested within 15 min, between 15 and 120 min and undigested after 120 min, respectively. The contents of RDS, SDS and RS were calculated according to reported equations [17 (link)].
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